Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_B09
         (852 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0098 + 25560158-25560925                                         32   0.67 
03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309...    31   1.2  
05_04_0028 + 17302359-17302445,17303887-17303952,17305415-173054...    31   1.5  
12_01_0796 + 7292523-7292783,7292963-7293018,7295274-7295331,729...    29   3.6  
06_01_0268 + 1989069-1989293,1989938-1990020,1990136-1990357,199...    29   6.2  
04_03_0732 + 19095320-19095827,19095848-19096621,19096863-190969...    29   6.2  
04_04_0647 - 26928244-26928535,26931321-26931454,26932278-26933414     28   8.2  

>05_06_0098 + 25560158-25560925
          Length = 255

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = -3

Query: 433 HRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRIWVRTGATSP 254
           HRP P P  +   P L  +P + V   I   P PT F + +      ++++   +  T P
Sbjct: 31  HRPPPPPPSSSSQPALPPSPRTVVPRTIDTTPFPTTFVQADTASFKQVVQMLTGSDTTPP 90


>03_04_0090 +
           17228253-17228403,17229062-17229129,17229238-17230902,
           17231002-17231143,17231648-17232399
          Length = 925

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
 Frame = -3

Query: 454 TNIDQTRH------RPHPLPVQTRHAPVLRANP 374
           T IDQ  H      + H +PVQ  H+PVL+ NP
Sbjct: 324 TQIDQPSHCQRIKNQDHSVPVQKNHSPVLKTNP 356


>05_04_0028 +
           17302359-17302445,17303887-17303952,17305415-17305489,
           17305638-17305737,17305819-17305865,17305937-17305994,
           17306161-17306210,17306417-17306473,17306561-17306703,
           17306793-17306834,17307083-17307124,17308239-17308272,
           17308342-17308443,17310373-17310652,17311202-17311332,
           17311676-17311773,17312525-17312717
          Length = 534

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 83  LKTPPRGPGRVFFSCLSVRVPWNPIEGRYGSEREEHRI 196
           LK PPR PG  F      R   + I GR+G + + HR+
Sbjct: 38  LKIPPRPPGYAFVEFEDPRDAQDAIYGRHGYDFDGHRL 75


>12_01_0796 +
           7292523-7292783,7292963-7293018,7295274-7295331,
           7295777-7295843,7296461-7296516,7296638-7296691,
           7296836-7296961
          Length = 225

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 424 HPLPVQTRHAPVLRANPYSEVTDPICRLPL 335
           H L +  RH P L+A P S +    C+LPL
Sbjct: 107 HSLIIPKRHFPSLQATPPSVIAAICCKLPL 136


>06_01_0268 +
           1989069-1989293,1989938-1990020,1990136-1990357,
           1990434-1990621,1990711-1990835,1990988-1991039,
           1991585-1991874,1992229-1992307,1992527-1992657
          Length = 464

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 418 LPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEAL 305
           +P Q + A  + A+P + V    C LP P+LF  L  L
Sbjct: 292 IPYQFQEATSILASPLAHVPASSCPLPAPSLFSSLPLL 329


>04_03_0732 +
           19095320-19095827,19095848-19096621,19096863-19096906,
           19097191-19097250
          Length = 461

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 430 RPHPLPVQTRHAPVLRANPYSEVTDP 353
           RP+PL V +RHA VL    +  V DP
Sbjct: 133 RPNPLDVVSRHAGVLSRGDHCLVVDP 158


>04_04_0647 - 26928244-26928535,26931321-26931454,26932278-26933414
          Length = 520

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 332 YIILSTRGSSPWRPAADMGTNRRDISTYIPHLNFQGPQRVSG 207
           + +L+ RG  P +PAA     RRD   ++P  + Q P    G
Sbjct: 28  HAVLAVRGPRPLQPAASASFRRRDRWFHLPLHDPQPPPAAEG 69


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,144,498
Number of Sequences: 37544
Number of extensions: 585076
Number of successful extensions: 1903
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1903
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)