Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_B09
         (852 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S80343-1|AAB35627.1|  659|Homo sapiens arginyl-tRNA synthetase p...    31   5.3  
BC093754-1|AAH93754.1|  587|Homo sapiens hypothetical protein LO...    31   7.0  
BC093752-1|AAH93752.1|  587|Homo sapiens hypothetical protein LO...    31   7.0  
AF131737-1|AAD20026.1|  587|Homo sapiens Unknown protein.              31   7.0  
AC079353-1|AAY24034.1|  423|Homo sapiens unknown protein.              31   7.0  
AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant prot...    31   7.0  

>S80343-1|AAB35627.1|  659|Homo sapiens arginyl-tRNA synthetase
           protein.
          Length = 659

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 3/125 (2%)
 Frame = -2

Query: 389 PQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTNRRDISTYIPHLNFQGPQRVS 210
           P  Q+ F  Y  N    ++ ++ +          A+  T        +  + F GP  ++
Sbjct: 104 PSQQAKFGDYQCNSAMGISQMLKTKEPEVNPGEFAENITKHLPAMDVLKRVEFAGPGFIN 163

Query: 209 GHRRKCGALRVPNHISLL*DSMELERSGKKRKLFPDLSA---ASSGHFGLPRRTLVFKDE 39
           GH RK          SLL + ++L   G+ +K+  D S+   A   H G  R T++ +  
Sbjct: 164 GHLRK--DFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESI 221

Query: 38  GTIIE 24
             + E
Sbjct: 222 SRLFE 226


>BC093754-1|AAH93754.1|  587|Homo sapiens hypothetical protein
           LOC51057 protein.
          Length = 587

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +2

Query: 131 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 262
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


>BC093752-1|AAH93752.1|  587|Homo sapiens hypothetical protein
           LOC51057 protein.
          Length = 587

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +2

Query: 131 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 262
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


>AF131737-1|AAD20026.1|  587|Homo sapiens Unknown protein.
          Length = 587

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +2

Query: 131 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 262
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


>AC079353-1|AAY24034.1|  423|Homo sapiens unknown protein.
          Length = 423

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +2

Query: 131 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 262
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


>AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant
           protein.
          Length = 1264

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = -1

Query: 240 PEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQEKKTLPGPLGG 91
           P +  +A S  +P Q+  S R EP LP  GF  +   +       GPL G
Sbjct: 89  PSWPLNARSSSSPTQLGNSRRGEPTLPESGFRDSAGAQPNGSGGAGPLCG 138


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,455,697
Number of Sequences: 237096
Number of extensions: 2956534
Number of successful extensions: 8110
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8110
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)