Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_B04
         (854 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    25   0.89 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   2.1  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    23   3.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   8.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   8.3  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 25.0 bits (52), Expect = 0.89
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = +1

Query: 364  LLEDTPSSSTNGTETLVPEDNLYALMPPFE-TF-LNVDKTARLRHFFDNVKTGEL 522
            +L   P S   GT  ++P+DN    +P  E  F LNV+        ++ + T +L
Sbjct: 1047 ILNLRPLSMEKGTRPMIPDDNTSLALPKNEGPFRLNVETAKTNEEMWELIDTEKL 1101


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 388 STNGTETLVPEDNLYALMPPFETFLNVDKTARLRH 492
           S    ET++  ++ Y L PP E   +  +T R R+
Sbjct: 109 SRQDIETIIRRNSRYPLRPPQEVISHYRRTRRDRY 143


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 568 KVLCTAGPTSRYVADINVKAFLPVRNIIQAVDKKNVSRNYLM 693
           KVLC+     R+VAD + +     R +I   ++   SRN LM
Sbjct: 13  KVLCSKASLKRHVADKHAERQEEYRCVI--CERVYCSRNSLM 52


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 75  FWKRNNITSCWEKKNLNGSFIGCVLSGAVHKLSW 176
           F + N++   W  +  N  F+G   S  V +LSW
Sbjct: 229 FDRMNSLGLSWLDQLTNLGFLGMKESVEVDQLSW 262


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 75  FWKRNNITSCWEKKNLNGSFIGCVLSGAVHKLSW 176
           F + N++   W  +  N  F+G   S  V +LSW
Sbjct: 267 FDRMNSLGLSWLDQLTNLGFLGMKESVEVDQLSW 300


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,647
Number of Sequences: 438
Number of extensions: 5012
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)