Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_A22
         (856 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   5.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   7.1  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   7.1  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 44  HFCVCLAFNLFFYS 3
           H+C+ +A N FF+S
Sbjct: 114 HYCLFVASNCFFWS 127


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 44  HFCVCLAFNLFFYS 3
           H+C+ +A N FF+S
Sbjct: 114 HYCLFVASNCFFWS 127


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = +1

Query: 154 FCKHRIFLQNHFKEKLNIQNLFVCVKCH 237
           + K  I +++  K + + Q + +C++CH
Sbjct: 212 WAKKLIVVKDKKKSRSDEQTIDICMRCH 239


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -2

Query: 132 YCHLNNKNKHLLWAYELRRLSYNNLDQSSPFLRL 31
           Y  L  K     W Y L  L+YNN ++   +L +
Sbjct: 27  YSLLRVKRMMRSWYYLLTNLTYNNTNRKYYWLNV 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,127
Number of Sequences: 336
Number of extensions: 3386
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23659332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)