Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_A22
         (856 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    24   2.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    24   2.1  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    23   2.7  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    23   2.7  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    23   2.7  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    23   2.7  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   2.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   2.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   3.6  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   6.3  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 520 NVNMSTILNNYNFKVISTSNDVKE 591
           N+   TI+ NYN + +ST  D+ +
Sbjct: 409 NLGRKTIMVNYNPETVSTDYDMSD 432


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 13/57 (22%), Positives = 27/57 (47%)
 Frame = +1

Query: 313 YNNANITTNLIRSNIEVISNLNDVKEIKIEPLTPQFQDDIEIEVKLEEAPNISKSTV 483
           YNN ++ T    + I  +  LND+  +K       +   +EI   + +  + +K+T+
Sbjct: 374 YNNNDLDTKKWNNKISALRALNDLYNVK--NTLDSYNGSMEINQNIAQNIDHAKNTI 428


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 508 IPHNNVNMSTILNNYNFKVISTSNDVKEIKIEPITARY 621
           I +NN   +   NNYN K+    N +++I I P+   Y
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNINYIEQIPI-PVPVYY 126


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 508 IPHNNVNMSTILNNYNFKVISTSNDVKEIKIEPITARY 621
           I +NN   +   NNYN K+    N +++I I P+   Y
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNINYIEQIPI-PVPVYY 126


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 508 IPHNNVNMSTILNNYNFKVISTSNDVKEIKIEPITARY 621
           I +NN   +   NNYN K+    N +++I I P+   Y
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNINYIEQIPI-PVPVYY 126


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 508 IPHNNVNMSTILNNYNFKVISTSNDVKEIKIEPITARY 621
           I +NN   +   NNYN K+    N +++I I P+   Y
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNINYIEQIPI-PVPVYY 126


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 240 FHEKDQSVLQASGTEL 287
           FH +D  V++ASG EL
Sbjct: 538 FHHRDTPVVRASGREL 553


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 240 FHEKDQSVLQASGTEL 287
           FH +D  V++ASG EL
Sbjct: 628 FHHRDTPVVRASGREL 643


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 316 NNANITTNLIRSNIEVISNLNDV 384
           NNA I T+ + SN+ V   +N V
Sbjct: 526 NNAKIYTSSVNSNLTVNQTVNPV 548


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 54  DLNYCMTNDEVHKPKAN 104
           +LN+ + NDE   PK N
Sbjct: 77  NLNFFLKNDESESPKLN 93


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,000
Number of Sequences: 438
Number of extensions: 3815
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)