BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP02_FL5_A21 (813 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g07220.1 68414.m00768 expressed protein 40 0.001 At1g50260.1 68414.m05635 C2 domain-containing protein low simila... 30 1.6 At2g28990.1 68415.m03526 leucine-rich repeat protein kinase, put... 29 2.8 At1g76965.1 68414.m08961 glycine-rich protein 29 2.8 At2g02800.2 68415.m00225 protein kinase (APK2b) identical to pro... 29 3.7 At2g02800.1 68415.m00224 protein kinase (APK2b) identical to pro... 29 3.7 At1g72520.1 68414.m08386 lipoxygenase, putative similar to lipox... 29 3.7 At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to ... 29 4.9 At5g42370.1 68418.m05159 expressed protein 29 4.9 At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identic... 29 4.9 At2g45560.1 68415.m05665 cytochrome P450 family protein 29 4.9 At2g19150.1 68415.m02235 pectinesterase family protein contains ... 29 4.9 At5g16980.1 68418.m01989 NADP-dependent oxidoreductase, putative... 28 6.4 At5g22740.1 68418.m02656 glycosyl transferase family 2 protein s... 28 8.5 At1g10390.1 68414.m01171 nucleoporin family protein contains Pfa... 28 8.5 >At1g07220.1 68414.m00768 expressed protein Length = 507 Score = 40.3 bits (90), Expect = 0.001 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 1/88 (1%) Frame = -3 Query: 484 RIRFPSKPDTPRSSEPILIPKLRIQFADFP-YLHYSID*RLFTLETCCGYGYEPARHLHV 308 R+R P K +PRS +L+ L + F F L Y +D + +T G+ EP H+ Sbjct: 6 RLRLPHK-SSPRSPSYLLLCVLALSFFSFTALLFYKVDDFIAQTKTLAGHNLEPTPW-HI 63 Query: 307 HPSPEFSRSAESIRTPPQMRCSSRSEPY 224 P FS + + + ++CS S PY Sbjct: 64 FPRKSFSAATKHSQAYRILQCSYFSCPY 91 >At1g50260.1 68414.m05635 C2 domain-containing protein low similarity to CLB1 [Lycopersicon esculentum] GI:2789434; contains Pfam profile PF00168: C2 domain Length = 675 Score = 30.3 bits (65), Expect = 1.6 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +3 Query: 621 RTRVLRPSADLPSRKVVSVSFRARSARFCTTAVQRSAXN 737 R+RVLRPS + + + +S FR S T R A N Sbjct: 37 RSRVLRPSVKISNFRFISCGFRGNSKNLRLTDSSRKAAN 75 >At2g28990.1 68415.m03526 leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069 Length = 884 Score = 29.5 bits (63), Expect = 2.8 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 Query: 604 TFRTGSGPAFSGLPRIFLAVRSCRFRFVRDRHDSVRPPFNGQLXT 738 T+ T SG R++L+ R+ D HD + PFNG T Sbjct: 179 TYVTQSGSLMMSF-RVYLSNSDASIRYADDVHDRIWSPFNGSSHT 222 >At1g76965.1 68414.m08961 glycine-rich protein Length = 158 Score = 29.5 bits (63), Expect = 2.8 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -3 Query: 496 PGTGRIRFPSKPDTPRSSEPILIPKLRIQFAD 401 PG + FP KP+ P P +P+L + F D Sbjct: 93 PGAAIVVFPKKPEEPVKVVPTPMPQLNLFFGD 124 >At2g02800.2 68415.m00225 protein kinase (APK2b) identical to protein kinase APK2b [Arabidopsis thaliana] gi|2852449|dbj|BAA24695 Length = 426 Score = 29.1 bits (62), Expect = 3.7 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Frame = -3 Query: 562 LRPHYIKILTR*NEHNARTSTRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 386 LRP ++L + ++ ST+PGTG ++ D+PR S ++ K +++ D P LH Sbjct: 352 LRPKMSEVLAKLDQLE---STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408 >At2g02800.1 68415.m00224 protein kinase (APK2b) identical to protein kinase APK2b [Arabidopsis thaliana] gi|2852449|dbj|BAA24695 Length = 426 Score = 29.1 bits (62), Expect = 3.7 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Frame = -3 Query: 562 LRPHYIKILTR*NEHNARTSTRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 386 LRP ++L + ++ ST+PGTG ++ D+PR S ++ K +++ D P LH Sbjct: 352 LRPKMSEVLAKLDQLE---STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408 >At1g72520.1 68414.m08386 lipoxygenase, putative similar to lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140 [Lycopersicon esculentum], GB:CAB56692 [Arabidopsis thaliana] Length = 926 Score = 29.1 bits (62), Expect = 3.7 Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 5/88 (5%) Frame = -3 Query: 277 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTL---VF 107 +S + P R ++PYLPS G RTLR+K +L G L R V+ Sbjct: 215 QSQKDHPSKRILFTNQPYLPSETPSGLRTLREKE--LENLRGNGKGERKLSDRIYDYDVY 272 Query: 106 KDEGT--IIETVPLPGSGIGTGFPFAQR 29 D G I + P G G FP+ +R Sbjct: 273 NDIGNPDISRELARPTLG-GREFPYPRR 299 >At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to autophagy 7 [Arabidopsis thaliana] GI:19912147; contains Pfam profile PF00899: ThiF family Length = 697 Score = 28.7 bits (61), Expect = 4.9 Identities = 13/45 (28%), Positives = 25/45 (55%) Frame = -1 Query: 282 PQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRR 148 P ++G CG +V NH++LL +S+ L+ ++S +R + Sbjct: 42 PISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLIASTSHGNRNK 86 >At5g42370.1 68418.m05159 expressed protein Length = 447 Score = 28.7 bits (61), Expect = 4.9 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = -2 Query: 221 PFYRIPWNSNAQAEKKTLPGPLGGVFRPL-WVTPSNTR 111 P Y + + Q+ +K +P PL + R L W TPS R Sbjct: 285 PLYDVTSSGLVQSVEKVVPRPLRSIVRLLFWYTPSTMR 322 >At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identical to low affinity calcium antiporter CAX2 (GI:1488267) [Arabidopsis thaliana]; Ca2+:Cation Antiporter (CaCA) Family member PMID:11500563 Length = 441 Score = 28.7 bits (61), Expect = 4.9 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%) Frame = +3 Query: 84 SIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFC--LSVRVPWNPI 215 S++ SL TS + PK P+++ S K +FC L++ +P+ P+ Sbjct: 41 SLMEQGSLSTSFPQHTPKAPKNSVLNSIKIVIFCNKLNLLLPFGPL 86 >At2g45560.1 68415.m05665 cytochrome P450 family protein Length = 512 Score = 28.7 bits (61), Expect = 4.9 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = +2 Query: 467 GREADAAGAGSGRCSCVMFVLAS*YFNIMRPQKLYIFNMTLAKIVLRFGLDPD 625 GR+ + G+GR C LA ++M LY F+ L K VL LD D Sbjct: 435 GRDYELTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKLPKGVLSEDLDMD 487 >At2g19150.1 68415.m02235 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase Length = 339 Score = 28.7 bits (61), Expect = 4.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +3 Query: 252 ICGGVRILSADLENSGEGCTWRCRAGSYPYPQQV 353 I GG+ + ++ EGCT + R G YP P +V Sbjct: 185 ISGGIDFIFGGAQSIFEGCTLKLRVGIYP-PNEV 217 >At5g16980.1 68418.m01989 NADP-dependent oxidoreductase, putative strong similarity to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430], Arabidopsis thaliana Length = 239 Score = 28.3 bits (60), Expect = 6.4 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -3 Query: 628 RVRIQSET*DDFRECHIKYIQFLRPH 551 R+RIQ DF + + K+++FL PH Sbjct: 172 RIRIQGFVVSDFYDEYSKFLEFLHPH 197 >At5g22740.1 68418.m02656 glycosyl transferase family 2 protein similar to beta-(1-3)-glucosyl transferase GB:AAC62210 GI:3687658 from [Bradyrhizobium japonicum], cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535 Length = 534 Score = 27.9 bits (59), Expect = 8.5 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = +1 Query: 556 ASKTVYI*YDTRENRLTFRTGSGPAFSGLPRIFLAVRSCRFRFVRDRHDSVRPPF 720 ASK + I Y RENR+ ++ G+ GL R + V+ C + + D P F Sbjct: 154 ASKGINIRYQIRENRVGYKAGA--LKEGLKRSY--VKHCEYVVIFDADFQPEPDF 204 >At1g10390.1 68414.m01171 nucleoporin family protein contains Pfam profiles: PF04096 nucleoporin autopeptidase, PF03093 nucleoporin FG repeat family Length = 1041 Score = 27.9 bits (59), Expect = 8.5 Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 5/105 (4%) Frame = -3 Query: 343 GYGYEPARHLHVHPSPEFSRSAESIRTPPQMRCSSRS-EPYLPSI--GFHGTRTLRQKRK 173 G+G P++ PSP F +++ + P S+ P P+I GT T Sbjct: 410 GFGISPSQPNPFSPSPAFGQTSANPTNPFSSSTSTNPFAPQTPTIASSSFGTATSNFGSS 469 Query: 172 LFPDLSAASSGHFGLPRRTLVFKDEGTIIETVPLP--GSGIGTGF 44 F S+++ G T VF T P P GS GF Sbjct: 470 PFGVTSSSNLFGSGSSTTTSVFGSSSAFGTTTPSPLFGSSSTPGF 514 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,511,735 Number of Sequences: 28952 Number of extensions: 418095 Number of successful extensions: 1207 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1148 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1207 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1853336000 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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