Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_A20
         (839 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.7  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   2.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.3  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   5.3  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   9.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.2  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +3

Query: 672 SXTGXWPPXXPPXPTHPPDXQXHPS 746
           S TG  PP  P    HPP    HP+
Sbjct: 225 SPTGLIPPH-PGLSPHPPHLSSHPA 248


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +3

Query: 672 SXTGXWPPXXPPXPTHPPDXQXHPS 746
           S TG  PP  P    HPP    HP+
Sbjct: 117 SPTGLIPPH-PGLSPHPPHLSSHPA 140


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 693 PXXPPXPTHPPDXQXHPS 746
           P  PP P+ PP+ +  PS
Sbjct: 95  PTTPPTPSPPPEERLTPS 112


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = -2

Query: 343 RPRLIAV*LAIAE----VVFRLWLNSLCHVLIGLHGH 245
           RP +  +   +AE    ++  + L S+C+ +IGL+ H
Sbjct: 486 RPSIYFISKTLAESPIFIIIPVTLTSVCYFMIGLNSH 522


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 127 QFAVLWAGLFVICSGNV 177
           QF +LW    +I +GNV
Sbjct: 27  QFTLLWVLFVIIVAGNV 43


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = +3

Query: 666 GSSXTGXWPPXXPPXPTHPP 725
           G   +G  PP   P P  PP
Sbjct: 66  GGPPSGGQPPQGMPYPRFPP 85


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 645 PLSRQCRNTTCE 610
           PL + C N TCE
Sbjct: 151 PLKKLCNNGTCE 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,274
Number of Sequences: 336
Number of extensions: 3960
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)