Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_A20
         (839 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70682-9|CAA94587.2|  460|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z70680-9|CAA94576.2|  460|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z50044-6|CAA90358.1|  223|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AF003151-17|ABJ99068.1|   99|Caenorhabditis elegans Hypothetical...    28   9.5  

>Z70682-9|CAA94587.2|  460|Caenorhabditis elegans Hypothetical
           protein C25G4.1 protein.
          Length = 460

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -2

Query: 622 HDLRRQVSEVVDPAIILIFAHPVLXEEG*QPALYSIH--QKPPCCLR 488
           H+L +  S ++ P++ L+FA  VL  +   P   S H  +K  CC +
Sbjct: 267 HNLFKIFSNMLFPSLFLVFASAVLASDDLNPCNSSWHFFKKTGCCYK 313


>Z70680-9|CAA94576.2|  460|Caenorhabditis elegans Hypothetical
           protein C25G4.1 protein.
          Length = 460

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -2

Query: 622 HDLRRQVSEVVDPAIILIFAHPVLXEEG*QPALYSIH--QKPPCCLR 488
           H+L +  S ++ P++ L+FA  VL  +   P   S H  +K  CC +
Sbjct: 267 HNLFKIFSNMLFPSLFLVFASAVLASDDLNPCNSSWHFFKKTGCCYK 313


>Z50044-6|CAA90358.1|  223|Caenorhabditis elegans Hypothetical
           protein F22B5.6 protein.
          Length = 223

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -2

Query: 406 NP-GNFCMYPSCPLSIHIPRRKRPRLIAV*LAIAEVVFRLWLNSLCHVL 263
           NP G F    SC LS  I ++KRP      L +  V    WL +  H++
Sbjct: 3   NPYGTFAYVNSCCLSTWISQKKRPSYFLEALILPTVPESWWLLAQYHII 51


>AF003151-17|ABJ99068.1|   99|Caenorhabditis elegans Hypothetical
           protein D1007.19 protein.
          Length = 99

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 520 SIHQKPPCCLRLCSYTCRNAPSPNHPSQKGRQ 425
           +I+  P  C+R C++  +    P HP+ + RQ
Sbjct: 30  AIYTSPVQCVRCCTHYVKRRSLPLHPAHRKRQ 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,604,545
Number of Sequences: 27780
Number of extensions: 382037
Number of successful extensions: 1093
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)