Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_A19
         (817 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    26   0.41 
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    26   0.41 

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 25.8 bits (54), Expect = 0.41
 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
 Frame = +1

Query: 97  RFYIKDSMCGIWATFG---VTGGLTPTCVKCFSNIRHRGPDA-WRIEQ-----DAREPLA 249
           ++Y++  M  +W TFG   +   L   C   F N   +G  A W         ++R P  
Sbjct: 196 QYYLQADML-LWHTFGYYHILAMLNCLCSLWFINCTAKGRVAVWMCNNLHKALESRNPAK 254

Query: 250 ILGFQRLAIVDGRHGMQPM 306
           ILG  R   VD  H MQ +
Sbjct: 255 ILGAYRDLWVDLSHMMQQL 273


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 25.8 bits (54), Expect = 0.41
 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
 Frame = +1

Query: 97  RFYIKDSMCGIWATFG---VTGGLTPTCVKCFSNIRHRGPDA-WRIEQ-----DAREPLA 249
           ++Y++  M  +W TFG   +   L   C   F N   +G  A W         ++R P  
Sbjct: 196 QYYLQADML-LWHTFGYYHILAMLNCLCSLWFINCTAKGRVAVWMCNNLHKALESRNPAK 254

Query: 250 ILGFQRLAIVDGRHGMQPM 306
           ILG  R   VD  H MQ +
Sbjct: 255 ILGAYRDLWVDLSHMMQQL 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,910
Number of Sequences: 336
Number of extensions: 3607
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)