Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_A19
         (817 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1075 - 8770120-8770371,8770684-8770770,8770866-8770946,877...    62   7e-10
03_02_0643 - 10090720-10091007,10091121-10091228,10091314-100914...    53   2e-07
03_06_0296 + 32901696-32901892,32901989-32902232,32903992-329041...    28   7.7  

>06_01_1075 -
           8770120-8770371,8770684-8770770,8770866-8770946,
           8771043-8771177,8771363-8771584,8771676-8771756,
           8771954-8772115,8772991-8773106,8774333-8774474,
           8774592-8774687,8774987-8775125,8776297-8776376
          Length = 530

 Score = 61.7 bits (143), Expect = 7e-10
 Identities = 52/133 (39%), Positives = 70/133 (52%), Gaps = 8/133 (6%)
 Frame = +1

Query: 118 MCGIWATFGVTG---GLTPTCVKCFSNIRHRGPDAWRIEQDAREPLAILGFQRLAIVDGR 288
           MCGI A  GV           ++    +RHRGPD W      ++    L  QRLAIVD  
Sbjct: 1   MCGILAVLGVADVSLAKRSRIIELSRRLRHRGPD-WSGIHCYQD--CYLAHQRLAIVDPT 57

Query: 289 HGMQPMRLHCYPRTTLI-CNGEIYNCKRLQ---KQHEFQYETNCDVEAIIHLYQRFGIEE 456
            G QP  L+   ++ ++  NGEIYN + L+   K H+FQ  ++C+V  I HLY+ +G EE
Sbjct: 58  SGDQP--LYNEDKSVVVTVNGEIYNHEELKANLKSHKFQTASDCEV--IAHLYEEYG-EE 112

Query: 457 AVTNLXRGF-FVL 492
            V  L   F FVL
Sbjct: 113 FVDMLDGMFAFVL 125



 Score = 28.3 bits (60), Expect = 7.7
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 470 LXGVFSFCLVDGEKNKVYIARDPYGVRPLF 559
           L G+F+F L+D        ARD  G+ PL+
Sbjct: 117 LDGMFAFVLLDTRDKSFIAARDAIGICPLY 146


>03_02_0643 -
           10090720-10091007,10091121-10091228,10091314-10091400,
           10091488-10091568,10091669-10091803,10091919-10092140,
           10092377-10092457,10092565-10092726,10092851-10093041,
           10093190-10093331,10093449-10093547,10093668-10093806,
           10094355-10094392
          Length = 590

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 44/105 (41%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
 Frame = +1

Query: 190 IRHRGPDAWRIEQDAREPLAILGFQRLAIVDGRHGMQPMRLHCYPRT-TLICNGEIYNCK 366
           ++HRGPD   + Q     LA    QRLAIV    G QP  L+   RT  ++ NGEIYN K
Sbjct: 14  LKHRGPDWSGLYQCEGNFLAQ---QRLAIVSPLSGDQP--LYNADRTIVVVANGEIYNHK 68

Query: 367 RLQKQ--HEFQYETNCDVEAIIHLYQRFGIEEAVTNLXRGF-FVL 492
           +++KQ   +  + T  D E II LY+ +G E+ V  L   F FVL
Sbjct: 69  KIRKQFASKHTFSTGSDCEVIIPLYEEYG-EDFVDMLDGVFAFVL 112



 Score = 31.5 bits (68), Expect = 0.83
 Identities = 20/49 (40%), Positives = 23/49 (46%)
 Frame = +2

Query: 470 LXGVFSFCLVDGEKNKVYIARDPYGVRPLFSFHDPENDVLAICSEAKGL 616
           L GVF+F L D        ARD  GV PL+     +  V  I SE K L
Sbjct: 104 LDGVFAFVLYDTRTKTYMAARDAIGVNPLYIGRGSDGAVW-ISSEMKAL 151


>03_06_0296 +
           32901696-32901892,32901989-32902232,32903992-32904112,
           32904219-32904406
          Length = 249

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 470 LXGVFSFCLVDGEKNKVYIARDPYGVRPLFSFHDPEN 580
           + G F+F L D   N V++A D  G  P +   DP++
Sbjct: 127 INGKFAFVLYDCSNNSVFMATDADGSVPFYWGVDPDS 163


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,917,040
Number of Sequences: 37544
Number of extensions: 370427
Number of successful extensions: 741
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)