Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_A17
(844 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51303| Best HMM Match : WD40 (HMM E-Value=3.5e-40) 36 0.031
SB_5414| Best HMM Match : WD40 (HMM E-Value=6.6e-15) 36 0.031
SB_52725| Best HMM Match : WD40 (HMM E-Value=2.1e-22) 36 0.054
SB_13850| Best HMM Match : WD40 (HMM E-Value=3.1e-06) 36 0.054
SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22) 33 0.22
SB_44731| Best HMM Match : WD40 (HMM E-Value=1.1e-11) 33 0.29
SB_40185| Best HMM Match : WD40 (HMM E-Value=0) 33 0.38
SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14) 33 0.38
SB_17334| Best HMM Match : WD40 (HMM E-Value=3.1e-30) 32 0.51
SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35) 32 0.51
SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0) 32 0.67
SB_41590| Best HMM Match : WD40 (HMM E-Value=6.5e-13) 31 1.5
SB_58885| Best HMM Match : WD40 (HMM E-Value=0.00016) 31 1.5
SB_40171| Best HMM Match : WD40 (HMM E-Value=0.00071) 31 1.5
SB_31688| Best HMM Match : WD40 (HMM E-Value=3.3e-10) 31 1.5
SB_15865| Best HMM Match : WD40 (HMM E-Value=1.2e-05) 30 2.0
SB_20629| Best HMM Match : WD40 (HMM E-Value=0.0014) 30 2.7
SB_27500| Best HMM Match : WD40 (HMM E-Value=3.5e-05) 30 2.7
SB_10949| Best HMM Match : WD40 (HMM E-Value=3.1e-10) 30 2.7
SB_34040| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_54574| Best HMM Match : WD40 (HMM E-Value=0) 29 3.6
SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_29033| Best HMM Match : Ion_trans_2 (HMM E-Value=8.1e-29) 29 3.6
SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30) 29 4.7
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_49401| Best HMM Match : WD40 (HMM E-Value=1.6e-22) 29 6.2
SB_47704| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_42279| Best HMM Match : WD40 (HMM E-Value=2.2e-10) 28 8.2
SB_29857| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_21168| Best HMM Match : WD40 (HMM E-Value=6.3e-15) 28 8.2
SB_17121| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
>SB_51303| Best HMM Match : WD40 (HMM E-Value=3.5e-40)
Length = 400
Score = 36.3 bits (80), Expect = 0.031
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +1
Query: 316 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 495
+A + D+ + + L S + R GH A L+ V +SP LL + G D V LWD
Sbjct: 159 VATANEDSRVYLCDLRTGSASHILR--GHATAVLS-VSWSPLNQYLLATGGRDNKVLLWD 215
Query: 496 IRAGGSCV 519
+R SC+
Sbjct: 216 VRKAVSCL 223
>SB_5414| Best HMM Match : WD40 (HMM E-Value=6.6e-15)
Length = 490
Score = 36.3 bits (80), Expect = 0.031
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +1
Query: 331 SDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAG 507
SDN+ I+K+SD+ VC L GH +T VV+ P++ + + D V++W + G
Sbjct: 95 SDNNAYIWKVSDADRPPVC-LRGH-AGEVTSVVWCPQDITKVVTCSDDTTVRIWRMNRG 151
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 316 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATL-TQVVFSPKEDNLLYSTGLDGLVKLW 492
L S +++ I +Y+ S VC GH +T + SP +DN L S D +W
Sbjct: 44 LYASCTNDHIYMYECSVLGEDPVCSFTGHSNSTFYVKAALSP-DDNYLLSGSSDNNAYIW 102
Query: 493 DI 498
+
Sbjct: 103 KV 104
>SB_52725| Best HMM Match : WD40 (HMM E-Value=2.1e-22)
Length = 874
Score = 35.5 bits (78), Expect = 0.054
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Frame = +1
Query: 313 NLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLW 492
+L ++ N I++Y S ++ V L GH + QV++S ++D+ + S G+DG V W
Sbjct: 246 HLFAAVHGNVIQLY--SSTTFENVGNLKGHN-GKVRQVIWS-QDDSKIISCGMDGAVYEW 301
Query: 493 DIRAGGSCVLEYKDEEEEILR--PYECMDVSCNG 588
+ V YK E E +L+ Y + VS +G
Sbjct: 302 N-------VYNYKREGESVLKSCSYTSVTVSPDG 328
>SB_13850| Best HMM Match : WD40 (HMM E-Value=3.1e-06)
Length = 229
Score = 35.5 bits (78), Expect = 0.054
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Frame = +1
Query: 316 LAISLSDNSIEIYKLSDSSLHQVC-----RLHGHKEATLTQVVFSPKEDNLLYSTGLDGL 480
+A++ I I+ L L ++ L GH + V + P +NLL S D
Sbjct: 150 MAVACETGVISIWNLPSGGLTEILDEPVEELKGHYDKP-NIVRYHPNAENLLTSAAYDLT 208
Query: 481 VKLWDIRAGGSCV-LEYKDEE 540
VKLWDI A S + LE +E+
Sbjct: 209 VKLWDINAAKSVITLEGHNEQ 229
>SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22)
Length = 195
Score = 33.5 bits (73), Expect = 0.22
Identities = 30/85 (35%), Positives = 40/85 (47%)
Frame = +1
Query: 328 LSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAG 507
LS + I K S+++ V HKE + + FSP DN S DGLVK+WD
Sbjct: 88 LSADHSGIVKYWQSNMNNVQMYEAHKEP-VRGLSFSPT-DNKYASCADDGLVKIWDF--- 142
Query: 508 GSCVLEYKDEEEEILRPYECMDVSC 582
Y+ EE+ LR + DV C
Sbjct: 143 ------YRCMEEKTLRGHGA-DVKC 160
>SB_44731| Best HMM Match : WD40 (HMM E-Value=1.1e-11)
Length = 256
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 391 LHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVLEYKDEEEEILRPY 561
+ GH + T+ + FSP + LL S G+DG V++WD + L E+L +
Sbjct: 177 VRGHTD-TIHTMSFSP-DGTLLASGGMDGAVRVWDFGQVRNTTLSNSSSSSELLASF 231
>SB_40185| Best HMM Match : WD40 (HMM E-Value=0)
Length = 503
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +1
Query: 334 DNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 495
D + ++ L++ +L V L GH + T+ + FS ++ +L S GLD +KLW+
Sbjct: 290 DTRLLVWDLAEGTL--VAELKGHTD-TVYSLCFS-RDGTILASAGLDNCIKLWN 339
>SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14)
Length = 867
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 424 VVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCV-LEYKDEE 540
V + P +NLL S D VKLWDI A S + LE +E+
Sbjct: 116 VRYHPNAENLLTSAAYDLTVKLWDINAAKSVITLEGHNEQ 155
>SB_17334| Best HMM Match : WD40 (HMM E-Value=3.1e-30)
Length = 1292
Score = 32.3 bits (70), Expect = 0.51
Identities = 29/84 (34%), Positives = 36/84 (42%)
Frame = +1
Query: 460 STGLDGLVKLWDIRAGGSCVLEYKDEEEEILRPYECMDVSCNGIVLCTGSQLVDDDAYLV 639
S D KLWDIR GG+CV + E +I + +G TGS DDA
Sbjct: 130 SGACDASAKLWDIR-GGTCVQTFTGHESDI----NAVAFFPSGFAFGTGS----DDATCR 180
Query: 640 FFDXRKPXPLGGYWNSHTDDVTXI 711
FD R L Y SH + + I
Sbjct: 181 LFDIRADQELMMY--SHDNIICGI 202
>SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 32.3 bits (70), Expect = 0.51
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +1
Query: 316 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 495
LA +D ++ ++ L + L ++ HK+ + QV +SP + +L S+G D + +WD
Sbjct: 337 LATGSADKTVALWDLRNLKL-KLHSFESHKDE-IFQVQWSPHNETILASSGTDRRLHVWD 394
Query: 496 I 498
+
Sbjct: 395 L 395
>SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35)
Length = 844
Score = 32.3 bits (70), Expect = 0.51
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +1
Query: 331 SDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAG 507
SD +I ++ L + +L V + GH + + + SP + L++ GLD V+ WD+R G
Sbjct: 447 SDGNIAVWDLHNQTL--VRQFQGHTDGA-SCIDISP-DGTKLWTGGLDNTVRSWDLREG 501
>SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0)
Length = 1127
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1
Query: 313 NLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLW 492
N I+L ++ + S SS + ++ H+ Q + K+ + +TGLDG +K+W
Sbjct: 626 NAIINLGHHNGTVTMWSPSSPDPLVKMLCHRGPV--QAIAIDKQGLYMATTGLDGQMKMW 683
Query: 493 DIR 501
D+R
Sbjct: 684 DVR 686
>SB_41590| Best HMM Match : WD40 (HMM E-Value=6.5e-13)
Length = 242
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +1
Query: 394 HGHKEATLTQVVFSPKEDNLLYSTGL-DGLVKLWDIRAGGSC--VLEYKDEEE 543
+ H ++ +T + F P + L+ TG DG VK+W+ G+C VL D+EE
Sbjct: 27 NAHDDSEITAMSFDPSKRRLV--TGARDGSVKIWNFN-NGACLRVLHQVDDEE 76
>SB_58885| Best HMM Match : WD40 (HMM E-Value=0.00016)
Length = 446
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +1
Query: 322 ISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIR 501
+ L DN I LS + V L ++ V FS + + +YSTG DG V +WD+
Sbjct: 289 VFLGDNGYMIL-LSSKTKQWVGNLK--MNGSVKDVTFSA-DGSRMYSTGSDGEVYVWDMT 344
Query: 502 AGGSCVLEYKDE 537
SCV ++ D+
Sbjct: 345 T-RSCVHKFVDD 355
>SB_40171| Best HMM Match : WD40 (HMM E-Value=0.00071)
Length = 155
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 406 EATLTQVVFSPKEDNLLYSTG-LDGLVKLWDIR 501
+ ++T VVF DNLL S G +DG +K+WD+R
Sbjct: 3 QQSVTAVVFHG--DNLLISAGAMDGNLKMWDLR 33
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 331 SDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKE 444
SDN+ I+K+SD+ VC L GH +T VV+ P++
Sbjct: 117 SDNNAYIWKVSDADRPPVC-LRGH-AGEVTSVVWCPQD 152
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 316 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATL-TQVVFSPKEDNLLYSTGLDGLVKLW 492
L S +++ I +Y+ S VC GH +T + SP +DN L S D +W
Sbjct: 66 LYASCTNDHIYMYECSVLGEDPVCSFTGHSNSTFYVKAALSP-DDNYLLSGSSDNNAYIW 124
Query: 493 DI 498
+
Sbjct: 125 KV 126
>SB_31688| Best HMM Match : WD40 (HMM E-Value=3.3e-10)
Length = 841
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 391 LHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAG 507
L GH T + F P D L+ S L G V++WD++ G
Sbjct: 24 LQGHPR-TPWCIAFHPSADELVASGCLGGEVRIWDLKGG 61
>SB_15865| Best HMM Match : WD40 (HMM E-Value=1.2e-05)
Length = 113
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 316 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 495
LAI L D S + + S+L ++ H H++ ++ + FSP + L D V +++
Sbjct: 38 LAIGLKDGSFMV--VDSSTLEEIAAFH-HRKEEISDLKFSPGQGKYLAVASHDNFVDIYN 94
Query: 496 I 498
+
Sbjct: 95 V 95
>SB_20629| Best HMM Match : WD40 (HMM E-Value=0.0014)
Length = 230
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 355 KLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVLEYKD 534
+L + +C HG K A +T + +DN + S+ +DG + WD+R VL Y
Sbjct: 151 RLKEPKTPVLCFSHG-KGAPITCIRVL-NDDNYVISSAMDGSLMRWDLRVSRP-VLAYLG 207
Query: 535 EEEEI 549
EI
Sbjct: 208 HNNEI 212
>SB_27500| Best HMM Match : WD40 (HMM E-Value=3.5e-05)
Length = 196
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 355 KLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVLEYKD 534
+L + +C HG K A +T + +DN + S+ +DG + WD+R VL Y
Sbjct: 53 RLKEPKTPVLCFSHG-KGAPITCIRVL-NDDNYVISSAMDGSLMRWDLRVSRP-VLAYLG 109
Query: 535 EEEEI 549
EI
Sbjct: 110 HNNEI 114
>SB_10949| Best HMM Match : WD40 (HMM E-Value=3.1e-10)
Length = 193
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 439 KEDNLLYSTGLDGLVKLWDIRAGGSCVL 522
KED + +T DG V++WD+R G + V+
Sbjct: 49 KEDRNVLATSHDGDVRIWDLRKGNTPVV 76
>SB_34040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -1
Query: 589 CHYRIHPCIHMASVFLPLHLCTPKHRSLLLLYPTALQVHQVQLSTVDC 446
CH+ + PC ++ LH HR +L+++ L + + +L+ DC
Sbjct: 131 CHFIVRPCCARSTC--GLHCAADIHRPVLIIWTARLMLIKGRLADRDC 176
>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1050
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +1
Query: 316 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 495
+A+ +I ++ L ++ + + L GH + F+ D + + LDG +K+WD
Sbjct: 857 IAVGCESGTISVFNLQEARV--MYTLAGHTNKLRRCMFFN--NDTRILTASLDGSLKVWD 912
Query: 496 IRAG 507
+ G
Sbjct: 913 AKTG 916
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 355 KLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAG 507
K+ D+S ++ G + + FSP DN++ + DG+V++WD +G
Sbjct: 952 KVWDASTGELLLSLGRHPDVVRSISFSP--DNMICTGCDDGIVRIWDSVSG 1000
>SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1855
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +1
Query: 391 LHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVLEYKDEEEEI 549
+HG A ++ ++P E +L S D ++++W + G C K ++ I
Sbjct: 897 IHGGHTAKISDFSWNPNEPWVLCSVSEDNIMQVWQMHPCGLCNKPTKSNQKAI 949
>SB_29033| Best HMM Match : Ion_trans_2 (HMM E-Value=8.1e-29)
Length = 387
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 166 IVDNEENDRDTVXPEELEQMFSKKYKIVTE 255
+++NE ++D V L F KKY I TE
Sbjct: 32 VLENENENKDVVNLNSLRMTFCKKYNISTE 61
>SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1803
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +1
Query: 388 RLHGHK----EATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAG 507
+L GH+ ++ + V FSP + LL STG D V +WDI G
Sbjct: 1361 KLSGHERLRYDSLVWSVDFSP-DGMLLASTGADSNVIIWDISTG 1403
>SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30)
Length = 1093
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 430 FSPKEDNLLYSTGLDGLVKLWDIRAGGSCV 519
++P NLL S +D V++WD G CV
Sbjct: 212 WNPVYTNLLASCSMDNSVRVWDTYLNGICV 241
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 373 LHQVCRLH-GHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAG 507
+H C++ H+ +T V + P + N+ + G +K WDIR G
Sbjct: 277 IHTGCQVSLFHQNDYVTCVQYHPIDRNVFLTGGARNGIKSWDIRTG 322
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 430 FSPKEDNLLYSTGLDGLVKLWDIR 501
F P +DN+ + G D +K+WD+R
Sbjct: 17 FHPFDDNVFLTGGWDRCLKIWDVR 40
>SB_49401| Best HMM Match : WD40 (HMM E-Value=1.6e-22)
Length = 453
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 391 LHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIR 501
L H++ T+T + ++P +++L S G D V +W I+
Sbjct: 57 LADHRK-TITAIAWNPHNEDILASAGADCRVLIWSIK 92
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 334 DNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDI 498
D + +Y L R GH E T+ F + ++L + DG VK+WD+
Sbjct: 347 DGGVGLYDLGKRRW-SFLREMGHVE-TIFDCKFKADDADMLATASFDGTVKVWDV 399
>SB_47704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 400 HKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIR 501
HK A T + FSP + LL S GLD + +D++
Sbjct: 168 HK-APATALAFSPANEMLLTSVGLDKKIVFYDVQ 200
>SB_42279| Best HMM Match : WD40 (HMM E-Value=2.2e-10)
Length = 291
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 334 DNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDI 498
D + +Y L R GH E T+ F + ++L + DG VK+WD+
Sbjct: 185 DGGVGLYDLGKRRW-SFLREMGHVE-TIFDCKFKADDADMLATASFDGTVKVWDV 237
>SB_29857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Frame = +1
Query: 169 VDNEENDRDTVXPEELEQMFSKKYKIVTEHAVSLLHSYIHRLDGTKSLNLAISLSDNSIE 348
V++E+ D+ P E Q F K AV ++ + G++ ++ I +
Sbjct: 119 VEHEDMDKFWRNPGEDLQFFQLKQHFAPVDAVLIMAGGRLCVSGSRDRSIGIW------D 172
Query: 349 IYKLSDSSLHQVCR--LHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIR 501
+ KL++ + + L GHK + + P ++ L S D VK+WD+R
Sbjct: 173 LTKLTEEEPQKAFKQSLDGHK-GWVWSLACDPMGESRLCSGSWDNSVKVWDLR 224
>SB_21168| Best HMM Match : WD40 (HMM E-Value=6.3e-15)
Length = 476
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 421 QVVFSPKEDNLLYSTGLDGLVKLWDIRAG 507
QV ED + S G+VK+WD+R G
Sbjct: 91 QVTAIKFEDGRIISGSASGIVKIWDVRDG 119
>SB_17121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 596
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +1
Query: 325 SLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRA 504
S S ++I+++K D + Q L GH V S DN+L S G +G + WD +
Sbjct: 462 SASPDNIKMWKFPDGNFLQ--NLSGHNTIINCLAVNS---DNVLVSGGDNGSMYFWDWKT 516
Query: 505 G 507
G
Sbjct: 517 G 517
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,163,767
Number of Sequences: 59808
Number of extensions: 461846
Number of successful extensions: 1252
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2383424791
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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