Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_A17
         (844 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    25   0.87 
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    24   1.5  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     24   2.0  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   6.2  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 25.0 bits (52), Expect = 0.87
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = -2

Query: 87  PNCLLIYLTLTIRFVSSGMSFFVPICI 7
           P C L  LT T   VSS +SF+VP CI
Sbjct: 182 PTCALD-LTPTYAVVSSSISFYVP-CI 206


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 140 KYCYKLWLILLITK-KMTEILXSPKNWSKCSVRSIKLLRN 256
           KYC  + L +  T  KMT IL  P  +  C VR IK +++
Sbjct: 109 KYCGNITLNIESTSNKMTVILTPPGRFF-CEVRPIKRVKD 147


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 289 RLDGTKSLNLAISLSDNSIEIYKLSDSS 372
           +LD T+  +L ISLS+N      +SDS+
Sbjct: 525 QLDSTELADLDISLSENLSSGLSISDST 552


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 109 LLSVPYGT*LFVDLFDFDNK 50
           +LS P+GT   +  FDF +K
Sbjct: 333 MLSHPFGTPRIMSSFDFQSK 352


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,810
Number of Sequences: 438
Number of extensions: 4451
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)