Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_A14
         (893 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC042167-1|AAH42167.1|  457|Homo sapiens Similar to tumor necros...    32   2.4  
BC011844-1|AAH11844.1|  457|Homo sapiens TNFRSF1B protein protein.     32   2.4  
X94552-1|CAA64245.1|  915|Homo sapiens glutamate receptor protein.     31   5.6  
U92458-1|AAB51763.1|  915|Homo sapiens metabotropic glutamate re...    31   5.6  
AF458054-1|AAM47559.1|  906|Homo sapiens metabotropic glutamate ...    31   5.6  
AF458053-1|AAM47558.1|  911|Homo sapiens metabotropic glutamate ...    31   5.6  
AF458052-1|AAM47557.1|  924|Homo sapiens metabotropic glutamate ...    31   5.6  
AB209214-1|BAD92451.1|  656|Homo sapiens Metabotropic glutamate ...    31   5.6  
DQ524090-1|ABI35602.1|  120|Homo sapiens immunoglobulin heavy ch...    31   7.5  
AY607399-1|AAT02014.1|  114|Homo sapiens non-productive immunogl...    31   7.5  

>BC042167-1|AAH42167.1|  457|Homo sapiens Similar to tumor necrosis
           factor receptor superfamily, member 1B protein.
          Length = 457

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 19/56 (33%), Positives = 27/56 (48%)
 Frame = +1

Query: 265 LQRKPTVPRGQQRAGQGSQDPQQNPGARRERLRHPGLHQG*LGQNSDAHERAHHSE 432
           L+R+    R + R G+G  DP +  GARR RL   G   G LG  +       H++
Sbjct: 6   LERRRWAARARGREGRGQPDPARTHGARR-RLGRAGRRTGALGCGARLARPGQHAK 60


>BC011844-1|AAH11844.1|  457|Homo sapiens TNFRSF1B protein protein.
          Length = 457

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 19/56 (33%), Positives = 27/56 (48%)
 Frame = +1

Query: 265 LQRKPTVPRGQQRAGQGSQDPQQNPGARRERLRHPGLHQG*LGQNSDAHERAHHSE 432
           L+R+    R + R G+G  DP +  GARR RL   G   G LG  +       H++
Sbjct: 6   LERRRWAARARGREGRGQPDPARTHGARR-RLGRAGRRTGALGCGARLARPGQHAK 60


>X94552-1|CAA64245.1|  915|Homo sapiens glutamate receptor protein.
          Length = 915

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 377 CKPGCRSRSRRAPGFCWGSCDPC 309
           CKPG R ++++    CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548


>U92458-1|AAB51763.1|  915|Homo sapiens metabotropic glutamate
           receptor 7 protein.
          Length = 915

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 377 CKPGCRSRSRRAPGFCWGSCDPC 309
           CKPG R ++++    CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548


>AF458054-1|AAM47559.1|  906|Homo sapiens metabotropic glutamate
           receptor 7 variant 5 protein.
          Length = 906

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 377 CKPGCRSRSRRAPGFCWGSCDPC 309
           CKPG R ++++    CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548


>AF458053-1|AAM47558.1|  911|Homo sapiens metabotropic glutamate
           receptor 7 variant 4 protein.
          Length = 911

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 377 CKPGCRSRSRRAPGFCWGSCDPC 309
           CKPG R ++++    CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548


>AF458052-1|AAM47557.1|  924|Homo sapiens metabotropic glutamate
           receptor 7 variant 3 protein.
          Length = 924

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 377 CKPGCRSRSRRAPGFCWGSCDPC 309
           CKPG R ++++    CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548


>AB209214-1|BAD92451.1|  656|Homo sapiens Metabotropic glutamate
           receptor 7 variant protein.
          Length = 656

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 377 CKPGCRSRSRRAPGFCWGSCDPC 309
           CKPG R ++++    CW +C+PC
Sbjct: 282 CKPGQRKKTQKGTPCCW-TCEPC 303


>DQ524090-1|ABI35602.1|  120|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 120

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 152 AQYKLLKLPFTGELIEHVDYWGEGSIV 232
           A Y   +L + GEL+   DYWG+G++V
Sbjct: 90  AVYYCARLLWFGELLHTFDYWGQGTLV 116


>AY607399-1|AAT02014.1|  114|Homo sapiens non-productive
           immunoglobulin heavy chain CDR3 protein.
          Length = 114

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = +2

Query: 152 AQYKLLKLPFTGELIE--HVDYWGEGSIV 232
           A Y     P+ GEL+E  + DYWG+G++V
Sbjct: 82  AVYYCASAPWIGELLERYYFDYWGQGTLV 110


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,925,690
Number of Sequences: 237096
Number of extensions: 2369554
Number of successful extensions: 15152
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15152
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)