Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_A13
(1321 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 33 0.32
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 33 0.32
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 33 0.42
At3g49840.1 68416.m05449 proline-rich family protein contains pr... 32 0.97
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 32 0.97
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 31 1.7
At1g61080.1 68414.m06877 proline-rich family protein 31 1.7
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 31 1.7
At2g27390.1 68415.m03306 proline-rich family protein contains pr... 30 3.0
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 25 3.9
At5g07760.1 68418.m00888 formin homology 2 domain-containing pro... 30 3.9
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 30 3.9
At4g16980.1 68417.m02560 arabinogalactan-protein family similar ... 29 5.2
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 29 5.2
At1g26150.1 68414.m03192 protein kinase family protein similar t... 29 5.2
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 29 6.8
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 29 6.8
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ... 29 6.8
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 29 9.0
At1g24150.1 68414.m03047 formin homology 2 domain-containing pro... 29 9.0
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 33.5 bits (73), Expect = 0.32
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 666 SGAPRXEXPPPXAPPPXXRXLEKVPXRXPPXXGPRXXRXRSPLR-GPVVPRXGXAP 830
+G PR PPP APPP + PP GP+ R P+ GP PR P
Sbjct: 383 AGPPR---PPPPAPPPGSGG-----PKPPPPPGPKGPRPPPPMSLGPKAPRPPSGP 430
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 33.5 bits (73), Expect = 0.32
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 666 SGAPRXEXPPPXAPPPXXRXLEKVPXRXPPXXGPRXXRXRSPLR-GPVVPRXGXAP 830
+G PR PPP APPP + PP GP+ R P+ GP PR P
Sbjct: 383 AGPPR---PPPPAPPPGSGG-----PKPPPPPGPKGPRPPPPMSLGPKAPRPPSGP 430
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 33.1 bits (72), Expect = 0.42
Identities = 19/49 (38%), Positives = 21/49 (42%)
Frame = +3
Query: 690 PPPXAPPPXXRXLEKVPXRXPPXXGPRXXRXRSPLRGPVVPRXGXAPQG 836
PPP APPP + P PP P+ SP GP VP P G
Sbjct: 771 PPPTAPPPPPLGQTRAPSAPPPPP-PKLGTKLSP-SGPNVPPTPALPTG 817
Score = 32.7 bits (71), Expect = 0.55
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +3
Query: 618 SRXXEXXRXPXPIRXXSGAPRXEXPPPXAPPPXXR--XLEKVPXRXPP 755
S + R P PI P PPP PPP + + KVP PP
Sbjct: 665 SNLGQPARSPPPISNSDKKPALPRPPPPPPPPPMQHSTVTKVPPPPPP 712
>At3g49840.1 68416.m05449 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 606
Score = 31.9 bits (69), Expect = 0.97
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +3
Query: 675 PRXEXPPPXAPPPXXRXLEKVPXRX-PPXXGPRXXRXRSPLRGPVVPRXGXAP 830
P+ PP PPP + P + PP P+ + P +GP P G AP
Sbjct: 523 PQAGYPPAGYPPPQQGYGQGYPAQGYPPPQYPQGHPPQYPYQGPPPPHYGQAP 575
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 31.9 bits (69), Expect = 0.97
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = +3
Query: 645 PXPIRXXSGAPRXEXPPPXAPPPXXRXLEKVPXRXPPXXGPRXXRXRSPLRGPVVPRXGX 824
P P + + PPP +PPP P PP SP PV P
Sbjct: 98 PQPPQSPPASAPTVSPPPVSPPPAPTSPPPTPASPPPAPASPPPAPASPPPAPVSPPPVQ 157
Query: 825 AP 830
AP
Sbjct: 158 AP 159
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 31.1 bits (67), Expect = 1.7
Identities = 19/71 (26%), Positives = 25/71 (35%)
Frame = +3
Query: 618 SRXXEXXRXPXPIRXXSGAPRXEXPPPXAPPPXXRXLEKVPXRXPPXXGPRXXRXRSPLR 797
S E + P P+ S P P P + PP + P PP P +P+
Sbjct: 64 SSPVESPKSPAPVSESSPPPT---PVPESSPPVPAPMVSSPVSSPPVPAPVADSPPAPVA 120
Query: 798 GPVVPRXGXAP 830
PV AP
Sbjct: 121 APVADVPAPAP 131
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 31.1 bits (67), Expect = 1.7
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 291 PPXPPXPLAXXARXTPXPPP 350
PP PP PLA A P PPP
Sbjct: 592 PPPPPMPLANGATPPPPPPP 611
Score = 30.7 bits (66), Expect = 2.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 270 PGVXRYXPPXPPXPLAXXARXTPXPPPXGXGETGA 374
PG PP PP P+ A P PPP G +G+
Sbjct: 556 PGTQAAPPPPPPPPMQNRA---PSPPPMPMGNSGS 587
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 270 PGVXRYXPPXPPXPLAXXARXTPXPPP 350
PG PP PP P A P PPP
Sbjct: 543 PGTAAAPPPPPPPPGTQAAPPPPPPPP 569
Score = 28.7 bits (61), Expect = 9.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 291 PPXPPXPLAXXARXTPXPPPXG 356
PP PP P A P PPP G
Sbjct: 536 PPPPPPPPGTAAAPPPPPPPPG 557
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 31.1 bits (67), Expect = 1.7
Identities = 18/67 (26%), Positives = 24/67 (35%)
Frame = +3
Query: 672 APRXEXPPPXAPPPXXRXLEKVPXRXPPXXGPRXXRXRSPLRGPVVPRXGXAPQGRPXAX 851
+P PP A PP +K P PP P P P+ + P G P
Sbjct: 383 SPPPPPPPSAAAPPPPPPPKKGPAAPPPPPPPGKKGAGPPPPPPMSKKGPPKPPGNPKGP 442
Query: 852 XRRGXSS 872
+ G +S
Sbjct: 443 TKSGETS 449
>At2g27390.1 68415.m03306 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 134
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +3
Query: 675 PRXEXPPPXAPPPXXRXLEKVPXRXPPXXGPR 770
PR E PPP PPP L P PP PR
Sbjct: 71 PRFELPPPLFPPPPLPRLPP-PLLPPPEEPPR 101
Score = 29.1 bits (62), Expect = 6.8
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
Frame = +3
Query: 645 PXPIRXXSGAPRXEXPPPXAPPPXXRXLEKVPXRXPPXXGP---RXXRXRSPLRGPV 806
P P+ PR PPP PPP E P PP P R +SP G V
Sbjct: 76 PPPLFPPPPLPRL--PPPLLPPPEEPPREPPPPPPPPEEPPPPASCLRTKSPENGIV 130
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 25.4 bits (53), Expect(2) = 3.9
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +3
Query: 690 PPPXAPPPXXRXLEKVPXRXPPXXGPRXXRXRSPLRGPVVPRXGXAPQGR 839
PPP PPP + K P + P P P R P P+ +G+
Sbjct: 91 PPPPQPPPRSQPPPKPPQKNLPRRHP------PPPRSPEKPKRDGLNKGK 134
Score = 23.0 bits (47), Expect(2) = 3.9
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +3
Query: 651 PIRXXSGAPRXEXPPPXAPPP 713
P+ S P PPP PPP
Sbjct: 36 PLFPQSPPPPPPPPPPPPPPP 56
>At5g07760.1 68418.m00888 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 853
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +3
Query: 690 PPPXAPPPXXRXLEKVPXRXPPXXGPRXXRXRSPLRGPVVP 812
PPP PPP R + P PP P R R+PL P P
Sbjct: 25 PPPPPPPPPMR--RRAPLPPPP---PPPMRRRAPLPPPPPP 60
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 645 PXPIRXXSGAPRXEXPPPXAPPPXXRXLEKVPXRXPPXXGP 767
P P S P PPP +PPP P PP P
Sbjct: 411 PPPAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSP 451
>At4g16980.1 68417.m02560 arabinogalactan-protein family similar to
arabinogalactan protein [Arabidopsis thaliana]
gi|10880495|gb|AAG24277; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 164
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/72 (25%), Positives = 22/72 (30%)
Frame = +3
Query: 597 PLGRXXXSRXXEXXRXPXPIRXXSGAPRXEXPPPXAPPPXXRXLEKVPXRXPPXXGPRXX 776
P+ S P P+ P P P PPP +P PP
Sbjct: 40 PMSSGGGSSVPPPVMSPMPMMTPPPMPMTPPPMPMTPPPMPMAPPPMPMASPPMMPMTPS 99
Query: 777 RXRSPLRGPVVP 812
SPL P +P
Sbjct: 100 TSPSPLTVPDMP 111
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 29.5 bits (63), Expect = 5.2
Identities = 21/84 (25%), Positives = 22/84 (26%)
Frame = +1
Query: 505 PXXPPXXGXKEXRGGSQXLPXXXQPPXXXXPRXGGSXXPXAXXPRGAXGPSXXXLERXXX 684
P PP +Q P PP P P A P PS
Sbjct: 577 PPPPPLPSRSIPPPLAQPPPPRPPPPPPPPPSSRSIPSPSAPPPPPPPPPSFGSTGNKRQ 636
Query: 685 RXPPPXPXRXXPARSRKXXXXXPP 756
PPP P P R PP
Sbjct: 637 AQPPPPPPPPPPTRIPAAKCAPPP 660
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +3
Query: 645 PXPIRXXSGAPRXEXPPPXAPPPXXRXLEKVPXRXPPXXGPRXXRXRSPLRGP 803
P P +G R PPP PPP + PP P S GP
Sbjct: 624 PPPSFGSTGNKRQAQPPPPPPPPPPTRIPAAKCAPPPPPPPPTSHSGSIRVGP 676
Score = 29.1 bits (62), Expect = 6.8
Identities = 27/95 (28%), Positives = 32/95 (33%), Gaps = 8/95 (8%)
Frame = +3
Query: 639 RXPXPIRXXSGAPRXEXPPPXAPPPXXR-------XLEKVPXRXPPXXGPRXXRXRSPLR 797
+ P P + R PPP PPP + L K P PP P R S
Sbjct: 697 KPPAPPPLPPSSTRLGAPPPPPPPPLSKTPAPPPPPLSKTPVPPPP---PGLGRGTSSGP 753
Query: 798 GPVVPRXGXAPQGRPXA-XXRRGXSSGRAXGXLXP 899
P+ + AP P A R GR G P
Sbjct: 754 PPLGAKGSNAPPPPPPAGRGRASLGLGRGRGVSVP 788
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 3/62 (4%)
Frame = +3
Query: 666 SGAPRXEXPPPX---APPPXXRXLEKVPXRXPPXXGPRXXRXRSPLRGPVVPRXGXAPQG 836
S P PPP APPP P PP P +P+ P P P
Sbjct: 93 SPPPEPSPPPPLPTEAPPPANPVSSPPPESSPPPPPPTEAPPTTPITSPSPPTNPPPPPE 152
Query: 837 RP 842
P
Sbjct: 153 SP 154
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 270 PGVXRYXPPXPPXPLAXXARXTPXPPP 350
P + R PP PP PL P PPP
Sbjct: 36 PLMRRRAPPPPPPPLMRRRAPPPPPPP 62
>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 407
Score = 29.1 bits (62), Expect = 6.8
Identities = 27/72 (37%), Positives = 31/72 (43%), Gaps = 11/72 (15%)
Frame = +3
Query: 657 RXXSGAP-RXEXPPPX---APPPXXRXLEKVPXRXPPXXGPRXXRXRSPLRGP------- 803
R G+P R P P +PPP R L R PP P R RSP+R P
Sbjct: 289 RRIRGSPVRRRSPLPLRRRSPPP--RRL-----RSPPRRSPIRRRSRSPIRRPGRSRSSS 341
Query: 804 VVPRXGXAPQGR 839
+ PR G P GR
Sbjct: 342 ISPRKGRGPAGR 353
>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 414
Score = 29.1 bits (62), Expect = 6.8
Identities = 27/72 (37%), Positives = 31/72 (43%), Gaps = 11/72 (15%)
Frame = +3
Query: 657 RXXSGAP-RXEXPPPX---APPPXXRXLEKVPXRXPPXXGPRXXRXRSPLRGP------- 803
R G+P R P P +PPP R L R PP P R RSP+R P
Sbjct: 296 RRIRGSPVRRRSPLPLRRRSPPP--RRL-----RSPPRRSPIRRRSRSPIRRPGRSRSSS 348
Query: 804 VVPRXGXAPQGR 839
+ PR G P GR
Sbjct: 349 ISPRKGRGPAGR 360
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 28.7 bits (61), Expect = 9.0
Identities = 21/78 (26%), Positives = 25/78 (32%), Gaps = 5/78 (6%)
Frame = +3
Query: 645 PXPIRXXSGAPRXEXPPPXAPPPXXRXLEKVPX--RXPPXXGPRXXRXRSPLRGPVVPR- 815
P P +P P P PP + P PP GP SP PV+P
Sbjct: 547 PSPSSPTPSSPIPSPPTPSTPPTPISPGQNSPPIIPSPPFTGPSPPSSPSPPLPPVIPSP 606
Query: 816 --XGXAPQGRPXAXXRRG 863
G P P + G
Sbjct: 607 PIVGPTPSSPPPSTPTPG 624
>At1g24150.1 68414.m03047 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 725
Score = 28.7 bits (61), Expect = 9.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 291 PPXPPXPLAXXARXTPXPPP 350
PP PP P+ TP PPP
Sbjct: 244 PPPPPPPIPVKQSATPPPPP 263
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,821,572
Number of Sequences: 28952
Number of extensions: 230549
Number of successful extensions: 1540
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 12,070,560
effective HSP length: 83
effective length of database: 9,667,544
effective search space used: 3441645664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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