BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP02_FL5_A10 (849 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC23A1.06c |cmk2|mkp2|MAPK-activated protein kinase Cmk2|Schiz... 27 2.5 SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 26 7.8 >SPAC23A1.06c |cmk2|mkp2|MAPK-activated protein kinase Cmk2|Schizosaccharomyces pombe|chr 1|||Manual Length = 504 Score = 27.5 bits (58), Expect = 2.5 Identities = 10/21 (47%), Positives = 16/21 (76%) Frame = +3 Query: 393 LASRESSLGGDQDLRVAGLPG 455 LA++ + GGD+++RVA PG Sbjct: 41 LAAKNVNAGGDEEIRVANYPG 61 >SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||Manual Length = 663 Score = 25.8 bits (54), Expect = 7.8 Identities = 16/67 (23%), Positives = 34/67 (50%) Frame = +1 Query: 346 ITKENEEKSIQTHLELSRQEKAAWEETKIYGWQDFQDFTLRRMFKKYSQLGVAALPDDKF 525 +++E+ E+ ++ E + ++K E + + ++L+ F QLG P+DK Sbjct: 538 LSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDK- 596 Query: 526 QALMRTV 546 QA++ V Sbjct: 597 QAVLDAV 603 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,033,648 Number of Sequences: 5004 Number of extensions: 57208 Number of successful extensions: 190 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 185 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 189 length of database: 2,362,478 effective HSP length: 72 effective length of database: 2,002,190 effective search space used: 420459900 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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