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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_A10
         (849 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC23A1.06c |cmk2|mkp2|MAPK-activated protein kinase Cmk2|Schiz...    27   2.5  
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M...    26   7.8  

>SPAC23A1.06c |cmk2|mkp2|MAPK-activated protein kinase
           Cmk2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 504

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +3

Query: 393 LASRESSLGGDQDLRVAGLPG 455
           LA++  + GGD+++RVA  PG
Sbjct: 41  LAAKNVNAGGDEEIRVANYPG 61


>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 663

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 16/67 (23%), Positives = 34/67 (50%)
 Frame = +1

Query: 346 ITKENEEKSIQTHLELSRQEKAAWEETKIYGWQDFQDFTLRRMFKKYSQLGVAALPDDKF 525
           +++E+ E+ ++   E + ++K   E  +     +   ++L+  F    QLG    P+DK 
Sbjct: 538 LSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDK- 596

Query: 526 QALMRTV 546
           QA++  V
Sbjct: 597 QAVLDAV 603


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,033,648
Number of Sequences: 5004
Number of extensions: 57208
Number of successful extensions: 190
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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