Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_A09
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p pro...    29   8.6  
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA...    29   8.6  
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB...    29   8.6  

>AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p
           protein.
          Length = 846

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 22/96 (22%), Positives = 26/96 (27%)
 Frame = +1

Query: 538 RFRXAXPXLYPXAPXXXPPXXXXPYXLXAXXPXLXLXXXTTHXSXEXPPXRPTXXPPPRR 717
           RF    P      P   PP    P       P +         + E PP  P   P    
Sbjct: 128 RFDPPPPHTIEPPPPPAPPTLVPPPP--PAPPTIKPPPPPAPPTVEPPPPPPPAPPTVEP 185

Query: 718 XLPXXXXPRXLXPXTPAARXXXTPPXXSXPSSXRXP 825
             P    P  + P  P A     PP    P+    P
Sbjct: 186 PPPPPPAPTKVEPPPPPAPAEVEPPPPPAPTELEPP 221


>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
           isoform A protein.
          Length = 1109

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 22/96 (22%), Positives = 26/96 (27%)
 Frame = +1

Query: 538 RFRXAXPXLYPXAPXXXPPXXXXPYXLXAXXPXLXLXXXTTHXSXEXPPXRPTXXPPPRR 717
           RF    P      P   PP    P       P +         + E PP  P   P    
Sbjct: 391 RFDPPPPHTIEPPPPPAPPTLVPPPP--PAPPTIKPPPPPAPPTVEPPPPPPPAPPTVEP 448

Query: 718 XLPXXXXPRXLXPXTPAARXXXTPPXXSXPSSXRXP 825
             P    P  + P  P A     PP    P+    P
Sbjct: 449 PPPPPPAPTKVEPPPPPAPAEVEPPPPPAPTELEPP 484


>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
           isoform B protein.
          Length = 1150

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 22/96 (22%), Positives = 26/96 (27%)
 Frame = +1

Query: 538 RFRXAXPXLYPXAPXXXPPXXXXPYXLXAXXPXLXLXXXTTHXSXEXPPXRPTXXPPPRR 717
           RF    P      P   PP    P       P +         + E PP  P   P    
Sbjct: 391 RFDPPPPHTIEPPPPPAPPTLVPPPP--PAPPTIKPPPPPAPPTVEPPPPPPPAPPTVEP 448

Query: 718 XLPXXXXPRXLXPXTPAARXXXTPPXXSXPSSXRXP 825
             P    P  + P  P A     PP    P+    P
Sbjct: 449 PPPPPPAPTKVEPPPPPAPAEVEPPPPPAPTELEPP 484


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,670,602
Number of Sequences: 53049
Number of extensions: 478133
Number of successful extensions: 1380
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)