Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_A07
(928 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 41 3e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.006
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.019
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.043
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.057
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.30
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.40
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.93
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.2
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 1.6
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 28 2.1
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 2.8
SPBC691.03c |apl3||AP-2 adaptor complex subunit Alp3 |Schizosacc... 27 2.8
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 5.0
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 26 8.7
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 26 8.7
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 26 8.7
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 8.7
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 8.7
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 40.7 bits (91), Expect = 3e-04
Identities = 24/68 (35%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +2
Query: 725 PGPPXPPSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPXP-PPXDPSXGPXVPAPA 901
P PP P + P P P P P Q A+P PP PS VP P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVP-PM 197
Query: 902 XPXXPPPP 925
P PPPP
Sbjct: 198 PPKVPPPP 205
Score = 39.1 bits (87), Expect = 9e-04
Identities = 20/67 (29%), Positives = 22/67 (32%)
Frame = +2
Query: 725 PGPPXPPSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPXPPPXDPSXGPXVPAPAX 904
P P PP+P PP P P P P A P P P P P +
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 905 PXXPPPP 925
P P P
Sbjct: 185 PSAPSLP 191
Score = 29.1 bits (62), Expect = 0.93
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 842 ASPXPPPXDPSXGPXVPAPAXPXXPPPPP 928
++P PP P AP P PPP P
Sbjct: 126 SAPAPPTPQSELRPPTSAPPRPSIPPPSP 154
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/57 (28%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Frame = +2
Query: 764 PPPXXXXPXXXGXPXXPXXRXXRPQXASPXP--PPXDPSXGPXVPAPAXPXXPPPPP 928
PP P P RP P P P PS P +P+ P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 845 SPXPPPXDPSXGPXVPAPAXP 907
+P PPP P+ P APA P
Sbjct: 2 APAPPPPPPAPAPAAAAPAPP 22
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/61 (24%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = +2
Query: 740 PPSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXAS-PXPPPXDPSXGPXVPAPAXPXXP 916
PP P PPP P + P P+ GP +P+ + P P
Sbjct: 195 PPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKFPNRGPSIPSASVPPVP 254
Query: 917 P 919
P
Sbjct: 255 P 255
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 36.3 bits (80), Expect = 0.006
Identities = 24/76 (31%), Positives = 26/76 (34%), Gaps = 5/76 (6%)
Frame = +2
Query: 716 SXXPGPPXPPS--PXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPX---PPPXDPSXG 880
S P P P S P + P P G P P P P PP PS
Sbjct: 1061 SAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGA 1120
Query: 881 PXVPAPAXPXXPPPPP 928
P VP P+ P P P
Sbjct: 1121 PPVPKPSVAAPPVPVP 1136
Score = 35.1 bits (77), Expect = 0.014
Identities = 23/67 (34%), Positives = 27/67 (40%)
Frame = +2
Query: 728 GPPXPPSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPXPPPXDPSXGPXVPAPAXP 907
G P P P + PP P G P P +P A+P P PS P VP P+
Sbjct: 1119 GAPPVPKPSVAAPP----VPVPSGAPPVP-----KPSVAAPPVPA--PSGAPPVPKPSVA 1167
Query: 908 XXPPPPP 928
P P P
Sbjct: 1168 APPVPAP 1174
Score = 35.1 bits (77), Expect = 0.014
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +2
Query: 731 PPXP-PSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPXPPPXDPSXGPXVPAPAXP 907
PP P PS P P P P P+ A+ PP PS P VP P+
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPV---PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVG 1206
Query: 908 XXPPPPP 928
P PPP
Sbjct: 1207 VPPVPPP 1213
Score = 32.3 bits (70), Expect = 0.100
Identities = 28/105 (26%), Positives = 31/105 (29%), Gaps = 5/105 (4%)
Frame = +2
Query: 626 PPTXXRKXXNPXXSVXPXXXXXXXXXRVGQSXXPGPPX--PPSPXLXRPPPXXXXPXXXG 799
P RK P + P + S PP PPS L +P
Sbjct: 951 PSNDGRKASGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLAR 1010
Query: 800 XPXXPXXRXXRPQXASPX---PPPXDPSXGPXVPAPAXPXXPPPP 925
P P P P PP PS P VP P PP P
Sbjct: 1011 VPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPT--STPPVP 1053
Score = 32.3 bits (70), Expect = 0.100
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Frame = +2
Query: 728 GPPXPPSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPX---PPPXDPSXG-PXVPA 895
G P P P + PP P G P P P +P PP P+ G P VP
Sbjct: 1138 GAPPVPKPSVAAPP----VPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Query: 896 PAX-PXXPPP 922
P+ P P P
Sbjct: 1194 PSEAPPVPKP 1203
Score = 31.9 bits (69), Expect = 0.13
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Frame = +2
Query: 731 PPXP-PSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPXPPPXDPSXGPXVPAPA-X 904
PP P PS P P P P P +S P PS P VPAP+
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGI 1091
Query: 905 PXXPPP 922
P P P
Sbjct: 1092 PPVPKP 1097
Score = 31.9 bits (69), Expect = 0.13
Identities = 22/65 (33%), Positives = 26/65 (40%)
Frame = +2
Query: 734 PXPPSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPXPPPXDPSXGPXVPAPAXPXX 913
P P P + PP P G P P +P A+P P PS P VP P+
Sbjct: 1102 PPVPKPSVAVPP----VPAPSGAPPVP-----KPSVAAPPVPV--PSGAPPVPKPSVAAP 1150
Query: 914 PPPPP 928
P P P
Sbjct: 1151 PVPAP 1155
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = +2
Query: 725 PGPPXPPSPXLXRPPPXXXXPXXXGXPXXPXXRXXR-PQXASPXPPPXDPSXGPXVPAPA 901
P PP P P P P P P+ + PP PS P VP P+
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPS 1223
Query: 902 XPXXPPPPP 928
P P P
Sbjct: 1224 AGLPPVPVP 1232
Score = 31.5 bits (68), Expect = 0.17
Identities = 20/67 (29%), Positives = 24/67 (35%)
Frame = +2
Query: 725 PGPPXPPSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPXPPPXDPSXGPXVPAPAX 904
P PP P PP P P P P ++P P P S P +PAP+
Sbjct: 1027 PSADAPPIPVPSTAPPV---PIPTSTPPVPKSSSGAP--SAPPPVPAPSSEIPSIPAPSG 1081
Query: 905 PXXPPPP 925
P P
Sbjct: 1082 APPVPAP 1088
Score = 30.3 bits (65), Expect = 0.40
Identities = 23/70 (32%), Positives = 23/70 (32%), Gaps = 3/70 (4%)
Frame = +2
Query: 728 GPPXPPSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPX--PPPXDPSXG-PXVPAP 898
G P P P PP P P P P P PP PS G P VP P
Sbjct: 1177 GIPPVPKPAAGVPP----VPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Query: 899 AXPXXPPPPP 928
P P P
Sbjct: 1233 TAKAPPVPAP 1242
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
Frame = +2
Query: 728 GPPXPPSPXLXRPPPXXXXPXXXGXPXXPXXRXXR--PQXASPXPPPXDPSXG-PXVPAP 898
G P P P P G P P P+ + PP PS P VPAP
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
Query: 899 AXPXXPPPP 925
+ P P
Sbjct: 1118 SGAPPVPKP 1126
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/65 (24%), Positives = 18/65 (27%)
Frame = +2
Query: 734 PXPPSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPXPPPXDPSXGPXVPAPAXPXX 913
P P P P P P P P +P P P+ P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 914 PPPPP 928
PP P
Sbjct: 1101 APPVP 1105
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.019
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 833 PQXASPXPPPXDPSXGPXVPAPAXPXXPP--PPP 928
PQ ++P PPP S P AP P PP PPP
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = +2
Query: 734 PXPPSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPXPPPXDPSXGPXVPAP 898
P PP P + PPP P G P P PPP S P VP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAP-------------PPPLPASSAPSVPNP 1746
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/64 (28%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = +2
Query: 743 PSPXLXRPP--PXXXXPXXXGXPXXPXXRXXRPQXASPXPPPXDPSXGPXVPAPAXPXXP 916
P+ + PP P P P P P S P P P P P PA
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPS 1742
Query: 917 PPPP 928
P P
Sbjct: 1743 VPNP 1746
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.043
Identities = 19/68 (27%), Positives = 21/68 (30%)
Frame = +2
Query: 725 PGPPXPPSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPXPPPXDPSXGPXVPAPAX 904
P PP PPS PP P P + P PP + P P A
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 905 PXXPPPPP 928
PPP
Sbjct: 371 STGRQPPP 378
Score = 31.9 bits (69), Expect = 0.13
Identities = 25/84 (29%), Positives = 27/84 (32%), Gaps = 11/84 (13%)
Frame = +2
Query: 710 GQSXXPGPPXPPSPXLXR-PPPXXXXPXXXGXPXXPXXRXXRPQXASPX----------P 856
G+S P PP +P R PPP P P R A P P
Sbjct: 357 GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPP 416
Query: 857 PPXDPSXGPXVPAPAXPXXPPPPP 928
P PS P P P PP P
Sbjct: 417 VPTPPSLPPSAPPSLPPSAPPSLP 440
Score = 31.5 bits (68), Expect = 0.17
Identities = 21/67 (31%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Frame = +2
Query: 731 PPXPPSPXLXRPP---PXXXXPXXXGXPXXPXXRXXRPQXASPXPPPXDPSXGPXVPAPA 901
PP PPS RPP P P P P SP P S P + + +
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPN-SPPRPIAPVSMNPAINSTS 288
Query: 902 XPXXPPP 922
P PPP
Sbjct: 289 KPPLPPP 295
Score = 29.9 bits (64), Expect = 0.53
Identities = 22/75 (29%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Frame = +2
Query: 710 GQSXXPGPPXPPSPXLXRPP-PXXXXPXXXGXPXXPXXRXXRPQXASPXPPPXDPSXGPX 886
G+S PP + PP P P P +P PP PS
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA 456
Query: 887 VPAPA-XPXXPPPPP 928
P PA P PP PP
Sbjct: 457 PPLPAGMPAAPPLPP 471
Score = 29.1 bits (62), Expect = 0.93
Identities = 19/68 (27%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Frame = +2
Query: 731 PPXPPSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQX--ASPXPPPXDPSXGPXVPAPAX 904
PP P P L P P P P P ++P PP P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPS--APPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPA 472
Query: 905 PXXPPPPP 928
PPP P
Sbjct: 473 APAPPPAP 480
Score = 28.7 bits (61), Expect = 1.2
Identities = 23/78 (29%), Positives = 23/78 (29%), Gaps = 5/78 (6%)
Frame = +2
Query: 710 GQSXXPGPPXPPSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPXPPPXDPS---XG 880
G S PP PP P P P P R PPP S
Sbjct: 330 GSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR--SAPSTGRQPPPLSSSRAVSN 387
Query: 881 PXVPAPAXPXXPPP--PP 928
P P PA P P PP
Sbjct: 388 PPAPPPAIPGRSAPALPP 405
Score = 26.6 bits (56), Expect = 5.0
Identities = 21/78 (26%), Positives = 24/78 (30%), Gaps = 3/78 (3%)
Frame = +2
Query: 704 RVGQSXXPGPPXPPSPX---LXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPXPPPXDPS 874
RV P PP P P + PP P +P P PPP
Sbjct: 244 RVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKP----PLPPPSSRV 299
Query: 875 XGPXVPAPAXPXXPPPPP 928
+ A PPPPP
Sbjct: 300 SAAALAANKKRPPPPPPP 317
Score = 26.6 bits (56), Expect = 5.0
Identities = 28/149 (18%), Positives = 43/149 (28%), Gaps = 1/149 (0%)
Frame = +2
Query: 485 DSPTMTLTX*ALDSAVNXPCTSPRRSAASXXHXSXPSGGXRVXXIWPPPTXXRKXXNPXX 664
+SP + +++ A+N P +S + + + PPP+ + P
Sbjct: 269 NSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIG 328
Query: 665 SVXPXXXXXXXXXRVGQSXXPGPPXPPSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXA 844
+ + P PP PPP G P R
Sbjct: 329 NGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGR-QPPPLSSSRAVSN 387
Query: 845 SPXPPPXDPS-XGPXVPAPAXPXXPPPPP 928
P PPP P P +P PP
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPP 416
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +2
Query: 842 ASPXPPPXDPSXGP--XVPAPAXPXXPPPPP 928
++P PP PS P VP+ + P PP PP
Sbjct: 228 SAPPIPPSIPSSRPPERVPSLSAPAPPPIPP 258
Score = 25.8 bits (54), Expect = 8.7
Identities = 37/134 (27%), Positives = 38/134 (28%), Gaps = 5/134 (3%)
Frame = +2
Query: 539 PCTSPRRSAASXXHXSXPSGGXRVXXIWPPPTXXRKXXNPXXSVXPXXXXXXXXXRVGQS 718
P P RSA S P R P P P S P R
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAI----PGRSA-PALPPLGNASRTSTP 415
Query: 719 XXPGPPX-PPSPXLXRPP---PXXXXPXXXGXPXXPXXRXXRPQXAS-PXPPPXDPSXGP 883
P PP PPS PP P P P P A P PP P+ P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPA-AP 474
Query: 884 XVPAPAXPXXPPPP 925
P PA P P
Sbjct: 475 -APPPAPAPAPAAP 487
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.1 bits (72), Expect = 0.057
Identities = 21/66 (31%), Positives = 24/66 (36%)
Frame = +2
Query: 725 PGPPXPPSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPXPPPXDPSXGPXVPAPAX 904
P P PP+P + PPP P G P P PPP + G APA
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPP----------PPPPPPAVSAGGSRYYAPAP 797
Query: 905 PXXPPP 922
P P
Sbjct: 798 QAEPEP 803
Score = 29.1 bits (62), Expect = 0.93
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 854 PPPXDPSXGPXVPAPAXPXXPPPPP 928
PPP P+ PAPA PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +2
Query: 764 PPPXXXXPXXXGXPXXPXXRXXRPQXASPXPPPXDPSXGPXVPAPAXPXXPPPPP 928
PPP P P P P PPP P P P P PPPPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPP--PAPIMGGPPPPPPPPGVAGAGPPP--P--PPPPP 783
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.30
Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Frame = +2
Query: 731 PPXPPSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPXPP--PXDPSXGPXVP-APA 901
P P +P + +PP P P P + P PP P P P VP PA
Sbjct: 596 PVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEV-PSVPQRPA 654
Query: 902 XPXXPPPP 925
P P P
Sbjct: 655 VPVVPEAP 662
Score = 29.5 bits (63), Expect = 0.70
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = +2
Query: 731 PPXPPSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPXPPPXDPSXGPXVPA-PAXP 907
P P +P + +PP P P P P+ S PP P P VP+ P P
Sbjct: 626 PVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVV-PEAPSVPQPPAAPVV-PEVPSVPQPP 683
Query: 908 XXPPPP 925
P P
Sbjct: 684 AVPVVP 689
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect = 0.40
Identities = 20/69 (28%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = +2
Query: 725 PGPPXPPSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPX-PPPXDPSXGPXVPAPA 901
P PP P PPP P + SP PP P +PAP
Sbjct: 184 PSDYNPPPP----PPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPP 239
Query: 902 XPXXPPPPP 928
P P PP
Sbjct: 240 PPPPPTLPP 248
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = +2
Query: 845 SPXP---PPXDPSXGPXVPAPAXPXXPPPPP 928
SP P PP + +P+ P PPPPP
Sbjct: 166 SPPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 0.93
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 857 PPXDPSXGPXVPAPAXPXXPPPPP 928
PP +P P P P PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 845 SPXPPPXDPSXGPXVPAPAXPXXPPPP 925
+P PPP P P P+ P PPPP
Sbjct: 8 NPPPPPPPPGFEP----PSQPPPPPPP 30
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = -2
Query: 927 GGGGGXXGXAGAGTXGPXEGSXGGGXGEAXCGRXXRXXGXXGXPXXXGXXXXGGG 763
G GG G G G+ GP G G G G G G G G G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPG 238
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +2
Query: 836 QXASPXPPPXD-PSXGPXVPAPAXPXXPPPPP 928
Q A P PPP P GP AP P PP
Sbjct: 1879 QAAPPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/55 (23%), Positives = 30/55 (54%)
Frame = -2
Query: 237 TLKVTNCFGSCKNN*SQXGEKSLRKVITYLKAGVARYSLCRSVRQSARRHGSAGF 73
TLKV + F +Q ++ ++++Y+++G+A + + +RHG+ G+
Sbjct: 330 TLKVGDPFAEDTFQGAQVSKQQYERIVSYIESGIAHGA---KLEIGGKRHGNLGY 381
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/63 (30%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Frame = +2
Query: 743 PSPXLXRPPPXXXXPXXXGXPXXPXXRXXRPQXASPXP--PPXDPSXGPXVPAPAXPXXP 916
P P PP P G P P +P P PP P+ P PA P P
Sbjct: 492 PLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPA--VPAMP 549
Query: 917 PPP 925
P
Sbjct: 550 GIP 552
>SPBC691.03c |apl3||AP-2 adaptor complex subunit Alp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 878
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = -3
Query: 317 INETSKSGRHSLLLTLQLFKSFILQSSH*KSRIVLEVAKIINHKXERKVCEKLSLI*KP 141
+N +S S R LL TL + + + +++ E + IIN + +++ CE L L+ P
Sbjct: 519 LNVSSPSTRVLLLTTLIKLANLQPELNDRIAKVFQEYSTIINPEVQQRACEYLQLLKMP 577
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +2
Query: 857 PPXDPSXGPXVPAPAXPXXPPPPP 928
P P+ P PA PPPPP
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPP 748
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 728 GPPXPPSPXLXRPP 769
GPP PP P L PP
Sbjct: 225 GPPSPPPPVLHSPP 238
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 924 GGGGXXGXAGAGTXGPXEGSXGGGXG 847
G G G G GP EG GGG G
Sbjct: 72 GEEGLNGQPGGPGGGPGEGFPGGGFG 97
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 73 RTLRTFTSNSSRPTSASRIPXP 8
R LRTF+ +S P S S P P
Sbjct: 181 RRLRTFSDSSLSPVSCSSFPKP 202
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -2
Query: 927 GGGGGXXGXAGAGTXGPXEGSXGGGXGEAXCGRXXRXXGXXGXPXXXGXXXXG 769
GG G G G G G G GG G GR G G G G
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARG-GRGGRGGARGGRGGSSGGRGGAKGG 70
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -2
Query: 927 GGGGGXXGXAGAGTXGPXEGSXGGGXGEAXCGR 829
G GGG G G G+ G G GG GR
Sbjct: 161 GFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRGR 193
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,705,817
Number of Sequences: 5004
Number of extensions: 44726
Number of successful extensions: 273
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 469338710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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