Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_A05
(923 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 200 1e-51
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 200 1e-51
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 200 1e-51
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 200 1e-51
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 4e-33
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 110 1e-24
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 110 1e-24
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 106 3e-23
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 49 4e-06
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 43 3e-04
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 43 3e-04
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 42 8e-04
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 42 8e-04
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 42 8e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 34 0.17
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 34 0.17
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 3.6
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 3.6
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 6.2
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 200 bits (487), Expect = 1e-51
Identities = 92/98 (93%), Positives = 94/98 (95%)
Frame = +2
Query: 131 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 310
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 311 DKLKAERERGITIDIALWKFETXKYYVTIIDAPGTQRF 424
DKLKAERERGITIDIALWKFET KYY+TIIDAPG + F
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDF 98
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +3
Query: 414 HRDFIKNMITGTSQADCAVLIVAAGTGDFEAGIS 515
HRDFIKNMITGTSQADCAVL+VA GTG+FEAGIS
Sbjct: 95 HRDFIKNMITGTSQADCAVLVVACGTGEFEAGIS 128
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 200 bits (487), Expect = 1e-51
Identities = 92/98 (93%), Positives = 94/98 (95%)
Frame = +2
Query: 131 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 310
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 311 DKLKAERERGITIDIALWKFETXKYYVTIIDAPGTQRF 424
DKLKAERERGITIDIALWKFET KYY+TIIDAPG + F
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDF 98
Score = 51.6 bits (118), Expect = 8e-07
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +3
Query: 414 HRDFIKNMITGTSQADCAVLIVAAGTGD 497
HRDFIKNMITGTSQADCAVL+VA D
Sbjct: 95 HRDFIKNMITGTSQADCAVLVVACNKMD 122
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 200 bits (487), Expect = 1e-51
Identities = 92/98 (93%), Positives = 94/98 (95%)
Frame = +2
Query: 131 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 310
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 311 DKLKAERERGITIDIALWKFETXKYYVTIIDAPGTQRF 424
DKLKAERERGITIDIALWKFET KYY+TIIDAPG + F
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDF 98
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +3
Query: 414 HRDFIKNMITGTSQADCAVLIVAAGTGDFEAGIS 515
HRDFIKNMITGTSQADCAVL+VA GTG+FEAGIS
Sbjct: 95 HRDFIKNMITGTSQADCAVLVVACGTGEFEAGIS 128
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 200 bits (487), Expect = 1e-51
Identities = 92/98 (93%), Positives = 94/98 (95%)
Frame = +2
Query: 131 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 310
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 311 DKLKAERERGITIDIALWKFETXKYYVTIIDAPGTQRF 424
DKLKAERERGITIDIALWKFET KYY+TIIDAPG + F
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDF 98
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +3
Query: 414 HRDFIKNMITGTSQADCAVLIVAAGTGDFEAGIS 515
HRDFIKNMITGTSQADCAVL+VA GTG+FEAGIS
Sbjct: 95 HRDFIKNMITGTSQADCAVLVVACGTGEFEAGIS 128
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 4e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +2
Query: 131 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 310
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 311 DKLKAER 331
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 110 bits (265), Expect = 1e-24
Identities = 49/95 (51%), Positives = 67/95 (70%)
Frame = +2
Query: 140 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 319
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 320 KAERERGITIDIALWKFETXKYYVTIIDAPGTQRF 424
+ ERERG+T+DI FET + ++DAPG + F
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDF 261
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +3
Query: 414 HRDFIKNMITGTSQADCAVLIVAAGTGDFEAG 509
H+DFI NMITGTSQAD A+L+V A TG+FE G
Sbjct: 258 HKDFISNMITGTSQADAAILVVNATTGEFETG 289
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 110 bits (265), Expect = 1e-24
Identities = 49/95 (51%), Positives = 67/95 (70%)
Frame = +2
Query: 140 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 319
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 320 KAERERGITIDIALWKFETXKYYVTIIDAPGTQRF 424
+ ERERG+T+DI FET + ++DAPG + F
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDF 279
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +3
Query: 414 HRDFIKNMITGTSQADCAVLIVAAGTGDFEAG 509
H+DFI NMITGTSQAD A+L+V A TG+FE G
Sbjct: 276 HKDFISNMITGTSQADAAILVVNATTGEFETG 307
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 106 bits (254), Expect = 3e-23
Identities = 47/97 (48%), Positives = 68/97 (70%)
Frame = +2
Query: 134 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 313
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 314 KLKAERERGITIDIALWKFETXKYYVTIIDAPGTQRF 424
ERE+G T+++ FET K + TI+DAPG + F
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSF 200
Score = 44.0 bits (99), Expect = 2e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3
Query: 414 HRDFIKNMITGTSQADCAVLIVAAGTGDFEAG 509
H+ F+ NMI G +QAD AVL+++A G+FE G
Sbjct: 197 HKSFVPNMIVGANQADLAVLVISARRGEFETG 228
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 49.2 bits (112), Expect = 4e-06
Identities = 35/93 (37%), Positives = 45/93 (48%)
Frame = +2
Query: 155 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 334
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI---------HVAGHVDKGN----TVTDFLDIERE 73
Query: 335 RGITIDIALWKFETXKYYVTIIDAPGTQRFHQE 433
RGIT+ A + + + +ID PG F E
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVE 106
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 44.4 bits (100), Expect = 1e-04
Identities = 30/93 (32%), Positives = 42/93 (45%)
Frame = +2
Query: 155 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 334
NI + H+DSGK+T T ++Y G ID + +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID----------SMHEVRGKDDVGATMDFMDLERQ 95
Query: 335 RGITIDIALWKFETXKYYVTIIDAPGTQRFHQE 433
RGITI A + + IID PG F E
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVE 128
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 43.2 bits (97), Expect = 3e-04
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +3
Query: 414 HRDFIKNMITGTSQADCAVLIVAAGTGDFE 503
H DFIKNMI GTSQ D AVL++AA G E
Sbjct: 118 HSDFIKNMICGTSQMDVAVLVIAATDGVME 147
Score = 35.5 bits (78), Expect = 0.054
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +2
Query: 143 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 316
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 317 LKAERERGITIDIALWKFETXKYYVTIIDAPGTQRF 424
K E++RGITI++A +E+ + D PG F
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDF 121
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 43.2 bits (97), Expect = 3e-04
Identities = 30/93 (32%), Positives = 41/93 (44%)
Frame = +2
Query: 155 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 334
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 335 RGITIDIALWKFETXKYYVTIIDAPGTQRFHQE 433
RGIT+ Y + +ID PG F E
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAE 118
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 43.2 bits (97), Expect = 3e-04
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +3
Query: 414 HRDFIKNMITGTSQADCAVLIVAAGTGDFE 503
H DFIKNMI GTSQ D AVL++AA G E
Sbjct: 118 HSDFIKNMICGTSQMDVAVLVIAATDGVME 147
Score = 35.5 bits (78), Expect = 0.054
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +2
Query: 143 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 316
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 317 LKAERERGITIDIALWKFETXKYYVTIIDAPGTQRF 424
K E++RGITI++A +E+ + D PG F
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDF 121
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 41.5 bits (93), Expect = 8e-04
Identities = 32/92 (34%), Positives = 43/92 (46%)
Frame = +2
Query: 137 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 316
++K H+N+ IGHVD GK+T T I K A G KY +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTS------------AITKI--LATSKGAKYRKYE-DIDN 89
Query: 317 LKAERERGITIDIALWKFETXKYYVTIIDAPG 412
E+ RGITI+ ++ET K + ID PG
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPG 121
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3
Query: 414 HRDFIKNMITGTSQADCAVLIVAAGTG 494
H D+IKNMITG +Q + A+L+VAA G
Sbjct: 122 HADYIKNMITGAAQMEGAILVVAATDG 148
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 41.5 bits (93), Expect = 8e-04
Identities = 32/92 (34%), Positives = 43/92 (46%)
Frame = +2
Query: 137 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 316
++K H+N+ IGHVD GK+T T I K A G KY +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTS------------AITKI--LATSKGAKYRKYE-DIDN 90
Query: 317 LKAERERGITIDIALWKFETXKYYVTIIDAPG 412
E+ RGITI+ ++ET K + ID PG
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPG 122
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3
Query: 414 HRDFIKNMITGTSQADCAVLIVAAGTG 494
H D+IKNMITG +Q + A+L+VAA G
Sbjct: 123 HADYIKNMITGAAQMEGAILVVAATDG 149
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 41.5 bits (93), Expect = 8e-04
Identities = 32/92 (34%), Positives = 43/92 (46%)
Frame = +2
Query: 137 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 316
++K H+N+ IGHVD GK+T T I K A G KY +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTS------------AITKI--LATSKGAKYRKYE-DIDN 90
Query: 317 LKAERERGITIDIALWKFETXKYYVTIIDAPG 412
E+ RGITI+ ++ET K + ID PG
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPG 122
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3
Query: 414 HRDFIKNMITGTSQADCAVLIVAAGTG 494
H D+IKNMITG +Q + A+L+VAA G
Sbjct: 123 HADYIKNMITGAAQMEGAILVVAATDG 149
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 33.9 bits (74), Expect = 0.17
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Frame = +2
Query: 131 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 283
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 284 GSFKYAWVLDKLKAERERG----ITIDIALWKFETXKYYVTIIDAPGTQRFHQE 433
+ + L+K E +G T+++ K + + + +ID+PG F E
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSE 126
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 33.9 bits (74), Expect = 0.17
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Frame = +2
Query: 131 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 283
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 284 GSFKYAWVLDKLKAERERG----ITIDIALWKFETXKYYVTIIDAPGTQRFHQE 433
+ + L+K E +G T+++ K + + + +ID+PG F E
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSE 126
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 233 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 334
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 233 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 334
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 152 INIVVIGHVDSGKSTTT 202
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 152 INIVVIGHVDSGKSTTT 202
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,702,824
Number of Sequences: 27780
Number of extensions: 294631
Number of successful extensions: 1463
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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