Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_A04
         (844 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0708 + 19648511-19648808,19649189-19649280,19650850-196510...    40   0.002
03_06_0495 + 34323082-34323173,34323600-34323742,34324265-343243...    36   0.031
03_02_0515 - 9046450-9046996,9047125-9047227,9047319-9047540,904...    29   6.1  
03_01_0053 + 457622-458191,458328-458393,458734-458978,459393-45...    29   6.1  

>09_04_0708 +
           19648511-19648808,19649189-19649280,19650850-19651000,
           19651779-19651906,19652099-19652257,19652325-19652507,
           19652978-19653178,19653269-19653289
          Length = 410

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
 Frame = +3

Query: 516 EDVQAAFDNVLEYIDDIDTANDFYKMGGFAMFPICYGSENEKVPCPRQYGPG*ALSEQSV 695
           ED Q A   +L  ++ ID AND  K+GG         + NE++     +  G A    ++
Sbjct: 160 EDRQRALQELLILVEPIDNANDLDKLGGLVAVIQDLNNANEEIRTTSAWVLGKASQNNAL 219

Query: 696 LPGEVLXVRSAERLLTL-VXQSRRXLVKCLYALS 794
           +  ++L   +  RL+ +    S     K LYA+S
Sbjct: 220 VQNQILGYGALARLVKMGYATSAEEATKALYAIS 253


>03_06_0495 +
           34323082-34323173,34323600-34323742,34324265-34324315,
           34324405-34324626,34324731-34324833,34325156-34325552,
           34326564-34326735,34326995-34327089,34327246-34327455
          Length = 494

 Score = 36.3 bits (80), Expect = 0.031
 Identities = 16/75 (21%), Positives = 41/75 (54%)
 Frame = +3

Query: 375 LMMKDANSLXDALKSLTVNIAEVLLNAIRILTNTERIRSIQFGEPLPEDVQAAFDNVLEY 554
           L  +D     +A+++ T+++ + +    +++   + +  +Q     PE+++   D + E+
Sbjct: 30  LSEEDKKWFMEAMQANTMDVVKRMKEITQVMKTPDDV--LQSQGVTPENIEDMLDELQEH 87

Query: 555 IDDIDTANDFYKMGG 599
           ++ ID AND + +GG
Sbjct: 88  VESIDMANDLHSIGG 102


>03_02_0515 -
           9046450-9046996,9047125-9047227,9047319-9047540,
           9048350-9048400,9048966-9049168,9049276-9049361
          Length = 403

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +3

Query: 513 PEDVQAAFDNVLEYIDDIDTANDFYKMGG 599
           P+D++     +  +++ ID AND + +GG
Sbjct: 92  PDDIEGLLAELQVHVESIDMANDLHSVGG 120


>03_01_0053 +
           457622-458191,458328-458393,458734-458978,459393-459861
          Length = 449

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -3

Query: 710 NFSWQNGLF*QSSARTVLARARDLLIFASIAYWKHS 603
           NFS  NG    S AR +LA A D L+ A + YW  S
Sbjct: 136 NFSTDNGFPSLSHARALLADAVD-LVRAQMPYWNRS 170


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,629,658
Number of Sequences: 37544
Number of extensions: 338514
Number of successful extensions: 858
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)