BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_A04
(844 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061359-1|AAL28907.1| 306|Drosophila melanogaster LD28549p pro... 33 0.49
AE014296-2180|ABC66152.1| 306|Drosophila melanogaster CG10973-P... 33 0.49
AY118319-1|AAM48348.1| 781|Drosophila melanogaster HL08052p pro... 29 6.0
AF162681-1|AAD50777.1| 737|Drosophila melanogaster maroon-like ... 29 6.0
AE014298-3026|AAF50901.1| 781|Drosophila melanogaster CG1692-PA... 29 6.0
>AY061359-1|AAL28907.1| 306|Drosophila melanogaster LD28549p
protein.
Length = 306
Score = 33.1 bits (72), Expect = 0.49
Identities = 26/72 (36%), Positives = 37/72 (51%)
Frame = +3
Query: 390 ANSLXDALKSLTVNIAEVLLNAIRILTNTERIRSIQFGEPLPEDVQAAFDNVLEYIDDID 569
A L +AL ++TV+ A L A+ IL N+E E +D + D + +IDDID
Sbjct: 42 AQFLANALNAMTVDAAAALKAALVIL-NSE--------ESSTDDQIESLDVIRSHIDDID 92
Query: 570 TANDFYKMGGFA 605
A K+GG A
Sbjct: 93 NAITLVKLGGTA 104
>AE014296-2180|ABC66152.1| 306|Drosophila melanogaster CG10973-PB,
isoform B protein.
Length = 306
Score = 33.1 bits (72), Expect = 0.49
Identities = 26/72 (36%), Positives = 37/72 (51%)
Frame = +3
Query: 390 ANSLXDALKSLTVNIAEVLLNAIRILTNTERIRSIQFGEPLPEDVQAAFDNVLEYIDDID 569
A L +AL ++TV+ A L A+ IL N+E E +D + D + +IDDID
Sbjct: 42 AQFLANALNAMTVDAAAALKAALVIL-NSE--------ESSTDDQIESLDVIRSHIDDID 92
Query: 570 TANDFYKMGGFA 605
A K+GG A
Sbjct: 93 NAITLVKLGGTA 104
>AY118319-1|AAM48348.1| 781|Drosophila melanogaster HL08052p
protein.
Length = 781
Score = 29.5 bits (63), Expect = 6.0
Identities = 24/67 (35%), Positives = 32/67 (47%)
Frame = +3
Query: 393 NSLXDALKSLTVNIAEVLLNAIRILTNTERIRSIQFGEPLPEDVQAAFDNVLEYIDDIDT 572
NS D K VN A+ LL N +RS+QF EPL E V N++ IDT
Sbjct: 645 NSSKDQQKLSLVNQAQFLL------LNKSSVRSLQFEEPLDETVDRFRANII-----IDT 693
Query: 573 ANDFYKM 593
+ F ++
Sbjct: 694 GSAFEEL 700
>AF162681-1|AAD50777.1| 737|Drosophila melanogaster maroon-like
protein protein.
Length = 737
Score = 29.5 bits (63), Expect = 6.0
Identities = 24/67 (35%), Positives = 32/67 (47%)
Frame = +3
Query: 393 NSLXDALKSLTVNIAEVLLNAIRILTNTERIRSIQFGEPLPEDVQAAFDNVLEYIDDIDT 572
NS D K VN A+ LL N +RS+QF EPL E V N++ IDT
Sbjct: 645 NSSKDQQKLSLVNQAQFLL------LNKSSVRSLQFEEPLDETVDRFRANII-----IDT 693
Query: 573 ANDFYKM 593
+ F ++
Sbjct: 694 GSAFEEL 700
>AE014298-3026|AAF50901.1| 781|Drosophila melanogaster CG1692-PA
protein.
Length = 781
Score = 29.5 bits (63), Expect = 6.0
Identities = 24/67 (35%), Positives = 32/67 (47%)
Frame = +3
Query: 393 NSLXDALKSLTVNIAEVLLNAIRILTNTERIRSIQFGEPLPEDVQAAFDNVLEYIDDIDT 572
NS D K VN A+ LL N +RS+QF EPL E V N++ IDT
Sbjct: 645 NSSKDQQKLSLVNQAQFLL------LNKSSVRSLQFEEPLDETVDRFRANII-----IDT 693
Query: 573 ANDFYKM 593
+ F ++
Sbjct: 694 GSAFEEL 700
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,837,628
Number of Sequences: 53049
Number of extensions: 600848
Number of successful extensions: 1636
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1636
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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