Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_A03
(796 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M62762-1|AAA60039.1| 155|Homo sapiens vacuolar H+ ATPase proton... 215 1e-55
CR541951-1|CAG46749.1| 155|Homo sapiens ATP6V0C protein. 215 1e-55
CR541930-1|CAG46728.1| 155|Homo sapiens ATP6V0C protein. 215 1e-55
BT007155-1|AAP35819.1| 155|Homo sapiens ATPase, H+ transporting... 215 1e-55
BC009290-1|AAH09290.1| 155|Homo sapiens ATPase, H+ transporting... 215 1e-55
BC007759-1|AAH07759.1| 155|Homo sapiens ATPase, H+ transporting... 215 1e-55
BC007389-1|AAH07389.1| 155|Homo sapiens ATPase, H+ transporting... 215 1e-55
BC004537-1|AAH04537.1| 155|Homo sapiens ATPase, H+ transporting... 215 1e-55
D89052-1|BAA13753.1| 205|Homo sapiens proton-ATPase-like protei... 76 1e-13
CR456972-1|CAG33253.1| 205|Homo sapiens ATP6V0B protein. 76 1e-13
BT007151-1|AAP35815.1| 205|Homo sapiens ATPase, H+ transporting... 76 1e-13
BC005876-1|AAH05876.1| 205|Homo sapiens ATPase, H+ transporting... 76 1e-13
BC000423-1|AAH00423.1| 205|Homo sapiens ATPase, H+ transporting... 76 1e-13
AL357079-17|CAI16801.1| 205|Homo sapiens ATPase, H+ transportin... 76 1e-13
D37766-1|BAA22263.1| 1172|Homo sapiens Laminin-5 beta3 chain pro... 33 0.90
DQ846849-1|ABI15201.1| 111|Homo sapiens dopamine D4 receptor pr... 32 2.1
BC146754-1|AAI46755.1| 926|Homo sapiens storkhead box 2 protein. 31 3.6
AB037813-1|BAA92630.1| 950|Homo sapiens KIAA1392 protein protein. 31 3.6
>M62762-1|AAA60039.1| 155|Homo sapiens vacuolar H+ ATPase proton
channel subunit protein.
Length = 155
Score = 215 bits (526), Expect = 1e-55
Identities = 110/138 (79%), Positives = 122/138 (88%)
Frame = +3
Query: 132 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 311
+++ P Y FF VMGA++A++FSALGAAYGTAKSGTGIAAMSVMRPE IMKSIIPVVMAG
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 312 IIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGT 491
IIAIYGLVVAVLIA +L + + LYK F+ LGAGL+VG SGLAAGFAIGIVGDAGVRGT
Sbjct: 64 IIAIYGLVVAVLIANSLND--DISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 492 AXQPRLFVGMILILIFAE 545
A QPRLFVGMILILIFAE
Sbjct: 122 AQQPRLFVGMILILIFAE 139
>CR541951-1|CAG46749.1| 155|Homo sapiens ATP6V0C protein.
Length = 155
Score = 215 bits (526), Expect = 1e-55
Identities = 110/138 (79%), Positives = 122/138 (88%)
Frame = +3
Query: 132 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 311
+++ P Y FF VMGA++A++FSALGAAYGTAKSGTGIAAMSVMRPE IMKSIIPVVMAG
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 312 IIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGT 491
IIAIYGLVVAVLIA +L + + LYK F+ LGAGL+VG SGLAAGFAIGIVGDAGVRGT
Sbjct: 64 IIAIYGLVVAVLIANSLND--DISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 492 AXQPRLFVGMILILIFAE 545
A QPRLFVGMILILIFAE
Sbjct: 122 AQQPRLFVGMILILIFAE 139
>CR541930-1|CAG46728.1| 155|Homo sapiens ATP6V0C protein.
Length = 155
Score = 215 bits (526), Expect = 1e-55
Identities = 110/138 (79%), Positives = 122/138 (88%)
Frame = +3
Query: 132 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 311
+++ P Y FF VMGA++A++FSALGAAYGTAKSGTGIAAMSVMRPE IMKSIIPVVMAG
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 312 IIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGT 491
IIAIYGLVVAVLIA +L + + LYK F+ LGAGL+VG SGLAAGFAIGIVGDAGVRGT
Sbjct: 64 IIAIYGLVVAVLIANSLND--DISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 492 AXQPRLFVGMILILIFAE 545
A QPRLFVGMILILIFAE
Sbjct: 122 AQQPRLFVGMILILIFAE 139
>BT007155-1|AAP35819.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 215 bits (526), Expect = 1e-55
Identities = 110/138 (79%), Positives = 122/138 (88%)
Frame = +3
Query: 132 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 311
+++ P Y FF VMGA++A++FSALGAAYGTAKSGTGIAAMSVMRPE IMKSIIPVVMAG
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 312 IIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGT 491
IIAIYGLVVAVLIA +L + + LYK F+ LGAGL+VG SGLAAGFAIGIVGDAGVRGT
Sbjct: 64 IIAIYGLVVAVLIANSLND--DISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 492 AXQPRLFVGMILILIFAE 545
A QPRLFVGMILILIFAE
Sbjct: 122 AQQPRLFVGMILILIFAE 139
>BC009290-1|AAH09290.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 215 bits (526), Expect = 1e-55
Identities = 110/138 (79%), Positives = 122/138 (88%)
Frame = +3
Query: 132 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 311
+++ P Y FF VMGA++A++FSALGAAYGTAKSGTGIAAMSVMRPE IMKSIIPVVMAG
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 312 IIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGT 491
IIAIYGLVVAVLIA +L + + LYK F+ LGAGL+VG SGLAAGFAIGIVGDAGVRGT
Sbjct: 64 IIAIYGLVVAVLIANSLND--DISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 492 AXQPRLFVGMILILIFAE 545
A QPRLFVGMILILIFAE
Sbjct: 122 AQQPRLFVGMILILIFAE 139
>BC007759-1|AAH07759.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 215 bits (526), Expect = 1e-55
Identities = 110/138 (79%), Positives = 122/138 (88%)
Frame = +3
Query: 132 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 311
+++ P Y FF VMGA++A++FSALGAAYGTAKSGTGIAAMSVMRPE IMKSIIPVVMAG
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 312 IIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGT 491
IIAIYGLVVAVLIA +L + + LYK F+ LGAGL+VG SGLAAGFAIGIVGDAGVRGT
Sbjct: 64 IIAIYGLVVAVLIANSLND--DISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 492 AXQPRLFVGMILILIFAE 545
A QPRLFVGMILILIFAE
Sbjct: 122 AQQPRLFVGMILILIFAE 139
>BC007389-1|AAH07389.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 215 bits (526), Expect = 1e-55
Identities = 110/138 (79%), Positives = 122/138 (88%)
Frame = +3
Query: 132 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 311
+++ P Y FF VMGA++A++FSALGAAYGTAKSGTGIAAMSVMRPE IMKSIIPVVMAG
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 312 IIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGT 491
IIAIYGLVVAVLIA +L + + LYK F+ LGAGL+VG SGLAAGFAIGIVGDAGVRGT
Sbjct: 64 IIAIYGLVVAVLIANSLND--DISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 492 AXQPRLFVGMILILIFAE 545
A QPRLFVGMILILIFAE
Sbjct: 122 AQQPRLFVGMILILIFAE 139
>BC004537-1|AAH04537.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 215 bits (526), Expect = 1e-55
Identities = 110/138 (79%), Positives = 122/138 (88%)
Frame = +3
Query: 132 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 311
+++ P Y FF VMGA++A++FSALGAAYGTAKSGTGIAAMSVMRPE IMKSIIPVVMAG
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 312 IIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGT 491
IIAIYGLVVAVLIA +L + + LYK F+ LGAGL+VG SGLAAGFAIGIVGDAGVRGT
Sbjct: 64 IIAIYGLVVAVLIANSLND--DISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 492 AXQPRLFVGMILILIFAE 545
A QPRLFVGMILILIFAE
Sbjct: 122 AQQPRLFVGMILILIFAE 139
>D89052-1|BAA13753.1| 205|Homo sapiens proton-ATPase-like protein
protein.
Length = 205
Score = 76.2 bits (179), Expect = 1e-13
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Frame = +3
Query: 171 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 350
+G AI S +GAA+G +G+ I V P + K+++ ++ +AIYG+++A++I
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 351 AGALQEP--ANYP-------LYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQP 503
+ + EP A P + G+ GAGL VG S L G +GIVG A P
Sbjct: 112 SN-MAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNP 170
Query: 504 RLFVGMILILIF 539
LFV ++++ IF
Sbjct: 171 SLFVKILIVEIF 182
Score = 32.3 bits (70), Expect = 2.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 402 HLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQPRLFVGMILILIFAE 545
+LG GLA+ S + A + I I G + + G PR+ ++ +IF E
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCE 98
>CR456972-1|CAG33253.1| 205|Homo sapiens ATP6V0B protein.
Length = 205
Score = 76.2 bits (179), Expect = 1e-13
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Frame = +3
Query: 171 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 350
+G AI S +GAA+G +G+ I V P + K+++ ++ +AIYG+++A++I
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 351 AGALQEP--ANYP-------LYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQP 503
+ + EP A P + G+ GAGL VG S L G +GIVG A P
Sbjct: 112 SN-MAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNP 170
Query: 504 RLFVGMILILIF 539
LFV ++++ IF
Sbjct: 171 SLFVKILIVEIF 182
Score = 32.3 bits (70), Expect = 2.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 402 HLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQPRLFVGMILILIFAE 545
+LG GLA+ S + A + I I G + + G PR+ ++ +IF E
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCE 98
>BT007151-1|AAP35815.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit c'' protein.
Length = 205
Score = 76.2 bits (179), Expect = 1e-13
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Frame = +3
Query: 171 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 350
+G AI S +GAA+G +G+ I V P + K+++ ++ +AIYG+++A++I
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 351 AGALQEP--ANYP-------LYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQP 503
+ + EP A P + G+ GAGL VG S L G +GIVG A P
Sbjct: 112 SN-MAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNP 170
Query: 504 RLFVGMILILIF 539
LFV ++++ IF
Sbjct: 171 SLFVKILIVEIF 182
Score = 32.3 bits (70), Expect = 2.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 402 HLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQPRLFVGMILILIFAE 545
+LG GLA+ S + A + I I G + + G PR+ ++ +IF E
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCE 98
>BC005876-1|AAH05876.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 76.2 bits (179), Expect = 1e-13
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Frame = +3
Query: 171 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 350
+G AI S +GAA+G +G+ I V P + K+++ ++ +AIYG+++A++I
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 351 AGALQEP--ANYP-------LYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQP 503
+ + EP A P + G+ GAGL VG S L G +GIVG A P
Sbjct: 112 SN-MAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNP 170
Query: 504 RLFVGMILILIF 539
LFV ++++ IF
Sbjct: 171 SLFVKILIVEIF 182
Score = 32.3 bits (70), Expect = 2.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 402 HLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQPRLFVGMILILIFAE 545
+LG GLA+ S + A + I I G + + G PR+ ++ +IF E
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCE 98
>BC000423-1|AAH00423.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 76.2 bits (179), Expect = 1e-13
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Frame = +3
Query: 171 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 350
+G AI S +GAA+G +G+ I V P + K+++ ++ +AIYG+++A++I
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 351 AGALQEP--ANYP-------LYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQP 503
+ + EP A P + G+ GAGL VG S L G +GIVG A P
Sbjct: 112 SN-MAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNP 170
Query: 504 RLFVGMILILIF 539
LFV ++++ IF
Sbjct: 171 SLFVKILIVEIF 182
Score = 32.3 bits (70), Expect = 2.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 402 HLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQPRLFVGMILILIFAE 545
+LG GLA+ S + A + I I G + + G PR+ ++ +IF E
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCE 98
>AL357079-17|CAI16801.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 76.2 bits (179), Expect = 1e-13
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Frame = +3
Query: 171 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 350
+G AI S +GAA+G +G+ I V P + K+++ ++ +AIYG+++A++I
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 351 AGALQEP--ANYP-------LYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQP 503
+ + EP A P + G+ GAGL VG S L G +GIVG A P
Sbjct: 112 SN-MAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNP 170
Query: 504 RLFVGMILILIF 539
LFV ++++ IF
Sbjct: 171 SLFVKILIVEIF 182
Score = 32.3 bits (70), Expect = 2.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 402 HLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQPRLFVGMILILIFAE 545
+LG GLA+ S + A + I I G + + G PR+ ++ +IF E
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCE 98
>D37766-1|BAA22263.1| 1172|Homo sapiens Laminin-5 beta3 chain
protein.
Length = 1172
Score = 33.5 bits (73), Expect = 0.90
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 311 YYCHLRSGRGCPDCWCPPGASQLPPLQRVH 400
Y+ L SG+GC C C P S P +Q VH
Sbjct: 468 YHWKLASGQGCEPCACDPHNSPQPTVQPVH 497
>DQ846849-1|ABI15201.1| 111|Homo sapiens dopamine D4 receptor
protein.
Length = 111
Score = 32.3 bits (70), Expect = 2.1
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 556 RPNTSAKIRIRIIPTNNLGX*AVPRTPASPTMPMAKPA--ARPENPTAKPAPKWMNP 392
RP A R PT A PRTPA+PT+ +PA P PT +P P+ +P
Sbjct: 31 RPPRPASPRTPAAPTVRPPRPASPRTPAAPTVRPPRPAFPGVPAAPTVRP-PRPASP 86
Score = 30.7 bits (66), Expect = 6.3
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -1
Query: 556 RPNTSAKIRIRIIPTNNLGX*AVPRTPASPTMPMAKPAA--RPENPTAKP 413
RP A + PT A PRTPA+PT+ +PA+ P PT +P
Sbjct: 15 RPPRPAFPGVPAAPTVRPPRPASPRTPAAPTVRPPRPASPRTPAAPTVRP 64
>BC146754-1|AAI46755.1| 926|Homo sapiens storkhead box 2 protein.
Length = 926
Score = 31.5 bits (68), Expect = 3.6
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Frame = +2
Query: 290 HSCRHGGYYCHL-----RSGRGCPDCWCPPGASQLPPLQR 394
H CR + H +S + C D +CPP Q+PP ++
Sbjct: 200 HCCREDVHSTHAPTLQRKSAKDCKDPYCPPSLCQVPPTEK 239
>AB037813-1|BAA92630.1| 950|Homo sapiens KIAA1392 protein protein.
Length = 950
Score = 31.5 bits (68), Expect = 3.6
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Frame = +2
Query: 290 HSCRHGGYYCHL-----RSGRGCPDCWCPPGASQLPPLQR 394
H CR + H +S + C D +CPP Q+PP ++
Sbjct: 224 HCCREDVHSTHAPTLQRKSAKDCKDPYCPPSLCQVPPTEK 263
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,982,604
Number of Sequences: 237096
Number of extensions: 2502178
Number of successful extensions: 12278
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 11118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12184
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -