Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_A02
(939 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 231 7e-61
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 231 7e-61
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 231 7e-61
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 229 3e-60
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 211 6e-55
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 207 8e-54
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 207 1e-53
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 207 1e-53
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 206 2e-53
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 206 2e-53
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 203 2e-52
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 203 2e-52
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 192 4e-49
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 190 9e-49
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 170 1e-42
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 146 2e-35
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 106 2e-23
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 106 2e-23
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 104 8e-23
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 103 2e-22
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 102 3e-22
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 100 3e-21
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 91 1e-18
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 91 1e-18
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 59 4e-09
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 59 4e-09
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 32 0.51
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.68
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 4.8
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 4.8
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 4.8
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 29 6.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 6.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 6.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 6.3
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 8.4
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 231 bits (564), Expect = 7e-61
Identities = 105/143 (73%), Positives = 119/143 (83%), Gaps = 1/143 (0%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXW 504
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARG H+ G
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG--HYTIGKEIIDLT 118
Query: 505 TESASSLT-SVPGLQGFLIFHSF 570
+ L + GLQGFL+FHSF
Sbjct: 119 LDRIRRLADNCTGLQGFLVFHSF 141
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 231 bits (564), Expect = 7e-61
Identities = 105/143 (73%), Positives = 119/143 (83%), Gaps = 1/143 (0%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXW 504
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARG H+ G
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG--HYTIGKEIIDLT 118
Query: 505 TESASSLT-SVPGLQGFLIFHSF 570
+ L + GLQGFL+FHSF
Sbjct: 119 LDRIRRLADNCTGLQGFLVFHSF 141
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 231 bits (564), Expect = 7e-61
Identities = 105/143 (73%), Positives = 119/143 (83%), Gaps = 1/143 (0%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXW 504
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARG H+ G
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG--HYTIGKEIIDLT 118
Query: 505 TESASSLT-SVPGLQGFLIFHSF 570
+ L + GLQGFL+FHSF
Sbjct: 119 LDRIRRLADNCTGLQGFLVFHSF 141
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 229 bits (559), Expect = 3e-60
Identities = 104/142 (73%), Positives = 118/142 (83%), Gaps = 1/142 (0%)
Frame = +1
Query: 148 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 327
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 328 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXWT 507
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARG H+ G
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG--HYTIGKEIIDLTL 118
Query: 508 ESASSLT-SVPGLQGFLIFHSF 570
+ L + GLQGFL+FHSF
Sbjct: 119 DRIRRLADNCTGLQGFLVFHSF 140
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 211 bits (515), Expect = 6e-55
Identities = 99/143 (69%), Positives = 111/143 (77%), Gaps = 1/143 (0%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXW 504
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARG H+ G
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARG--HYTIGKELIDVV 118
Query: 505 TESASSLTS-VPGLQGFLIFHSF 570
+ LT LQGFLIFHSF
Sbjct: 119 MDRVRRLTERCQSLQGFLIFHSF 141
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 207 bits (506), Expect = 8e-54
Identities = 96/144 (66%), Positives = 112/144 (77%), Gaps = 1/144 (0%)
Frame = +1
Query: 142 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 321
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 322 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGX 501
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARG H+ G
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARG--HYTIGKEIIDV 122
Query: 502 WTESASSLT-SVPGLQGFLIFHSF 570
+ L + GLQGFL+FHSF
Sbjct: 123 VMDRVRRLVENCRGLQGFLVFHSF 146
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 207 bits (505), Expect = 1e-53
Identities = 97/143 (67%), Positives = 113/143 (79%), Gaps = 1/143 (0%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXW 504
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG H+ G
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG--HYTVGKELIDTV 116
Query: 505 TESASSLT-SVPGLQGFLIFHSF 570
+ L + GLQGF +FHSF
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSF 139
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 207 bits (505), Expect = 1e-53
Identities = 97/143 (67%), Positives = 113/143 (79%), Gaps = 1/143 (0%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXW 504
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG H+ G
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG--HYTVGKELIDTV 116
Query: 505 TESASSLT-SVPGLQGFLIFHSF 570
+ L + GLQGF +FHSF
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSF 139
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 206 bits (502), Expect = 2e-53
Identities = 96/143 (67%), Positives = 113/143 (79%), Gaps = 1/143 (0%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXW 504
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG H+ G
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG--HYTVGKELIDTV 116
Query: 505 TESASSLT-SVPGLQGFLIFHSF 570
+ L + GLQGF +FHSF
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSF 139
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 206 bits (502), Expect = 2e-53
Identities = 96/143 (67%), Positives = 113/143 (79%), Gaps = 1/143 (0%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXW 504
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG H+ G
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG--HYTVGKELIDTV 116
Query: 505 TESASSLT-SVPGLQGFLIFHSF 570
+ L + GLQGF +FHSF
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSF 139
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 203 bits (495), Expect = 2e-52
Identities = 95/143 (66%), Positives = 112/143 (78%), Gaps = 1/143 (0%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXW 504
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARG H+ G
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARG--HYTVGKELIDTT 116
Query: 505 TESASSLT-SVPGLQGFLIFHSF 570
+ L + GLQGF +FHSF
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSF 139
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 203 bits (495), Expect = 2e-52
Identities = 95/143 (66%), Positives = 112/143 (78%), Gaps = 1/143 (0%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXW 504
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARG H+ G
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARG--HYTVGKELIDTT 116
Query: 505 TESASSLT-SVPGLQGFLIFHSF 570
+ L + GLQGF +FHSF
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSF 139
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 192 bits (467), Expect = 4e-49
Identities = 91/143 (63%), Positives = 105/143 (73%), Gaps = 1/143 (0%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXW 504
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARG H+ G
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARG--HYTVGKEIIDTT 115
Query: 505 TESASSL-TSVPGLQGFLIFHSF 570
+ L + GLQGF +FHSF
Sbjct: 116 LDRIRRLANNCEGLQGFFVFHSF 138
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 190 bits (464), Expect = 9e-49
Identities = 92/142 (64%), Positives = 104/142 (73%), Gaps = 1/142 (0%)
Frame = +1
Query: 148 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 327
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 328 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXWT 507
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG + G
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARG--RYTIGREMIDVVM 125
Query: 508 ESASSLT-SVPGLQGFLIFHSF 570
+ L + GLQGF+IFHSF
Sbjct: 126 DRVKRLAENCNGLQGFVIFHSF 147
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 170 bits (414), Expect = 1e-42
Identities = 79/142 (55%), Positives = 98/142 (69%), Gaps = 1/142 (0%)
Frame = +1
Query: 148 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 327
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 328 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXWT 507
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARG H+ G
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARG--HYTIGKELIDVVL 122
Query: 508 ESASSLT-SVPGLQGFLIFHSF 570
+ T + GLQGFL+FHSF
Sbjct: 123 DRIRKQTENCEGLQGFLVFHSF 144
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 146 bits (355), Expect = 2e-35
Identities = 72/121 (59%), Positives = 84/121 (69%), Gaps = 1/121 (0%)
Frame = +1
Query: 211 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 390
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 391 YRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXWTESASSLT-SVPGLQGFLIFHS 567
YR LFHPEQL++GKEDAAN YARG + G + L + GLQGF+IFHS
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARG--RYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHS 118
Query: 568 F 570
F
Sbjct: 119 F 119
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 106 bits (255), Expect = 2e-23
Identities = 56/142 (39%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXW 504
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKG--HYTEGAELVDNV 116
Query: 505 TESA-SSLTSVPGLQGFLIFHS 567
+ S LQGF + HS
Sbjct: 117 LDVVRKEAESTDCLQGFQLTHS 138
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 106 bits (255), Expect = 2e-23
Identities = 56/142 (39%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXW 504
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKG--HYTEGAELVDNV 116
Query: 505 TESA-SSLTSVPGLQGFLIFHS 567
+ S LQGF + HS
Sbjct: 117 LDVVRKEAESTDCLQGFQLTHS 138
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 104 bits (250), Expect = 8e-23
Identities = 56/142 (39%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXW 504
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKG--HYTEGAELVDNV 116
Query: 505 TESA-SSLTSVPGLQGFLIFHS 567
+ LQGF + HS
Sbjct: 117 LDVVRKEAEGCDCLQGFQLTHS 138
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 103 bits (246), Expect = 2e-22
Identities = 55/142 (38%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXW 504
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKG--HYTEGAELVDNV 116
Query: 505 TE-SASSLTSVPGLQGFLIFHS 567
+ LQGF + HS
Sbjct: 117 LDVIRKEAEGCDCLQGFQLTHS 138
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 102 bits (245), Expect = 3e-22
Identities = 55/142 (38%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXW 504
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKG--HYTEGAELVDNV 116
Query: 505 TE-SASSLTSVPGLQGFLIFHS 567
+ LQGF + HS
Sbjct: 117 LDVIRKEAEGCDCLQGFQLTHS 138
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 99.5 bits (237), Expect = 3e-21
Identities = 54/142 (38%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRXFGXW 504
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKG--HYTEGAELVDNV 116
Query: 505 TESA-SSLTSVPGLQGFLIFHS 567
+ S LQGF + HS
Sbjct: 117 LDVVRKEAESCDCLQGFQMTHS 138
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 91.1 bits (216), Expect = 1e-18
Identities = 44/106 (41%), Positives = 63/106 (59%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 462
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRG 104
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 91.1 bits (216), Expect = 1e-18
Identities = 44/106 (41%), Positives = 63/106 (59%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 462
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRG 104
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 59.3 bits (137), Expect = 4e-09
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Frame = +1
Query: 157 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 336
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 337 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARG 462
AV VDLEP V++ +++ + LF+ + + A NN+A G
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG 109
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 59.3 bits (137), Expect = 4e-09
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Frame = +1
Query: 157 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 336
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 337 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARG 462
AV VDLEP V++ +++ + LF+ + + A NN+A G
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG 109
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 32.3 bits (70), Expect = 0.51
Identities = 24/81 (29%), Positives = 25/81 (30%)
Frame = +1
Query: 673 PPGPPXFPWXAXXPLHLFXPXAXXPVEXXXPXXXXXARGRXPXXXXFPPXXPXXXPQXXP 852
P GP P P F P A PV P +G FPP P P
Sbjct: 253 PSGPADIPQGPGMP-RAFPPGASAPVAPGMPGAFPPGQGGPGMPGSFPPGAPGPGGPGMP 311
Query: 853 PXAAXLXAPGXSXRXXRPXGG 915
A APG P GG
Sbjct: 312 GSFAP-GAPGPGGPGGYPSGG 331
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 173 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 328
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 187 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 366
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 367 VDE 375
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 187 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 366
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 367 VDE 375
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 187 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 366
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 367 VDE 375
DE
Sbjct: 116 ADE 118
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 97 SVVVQRDRLSGLPNECESSSNQQC 26
SVVV +D S P+ C+ S +QQC
Sbjct: 374 SVVVVQDSQSSCPSACQPSCSQQC 397
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +3
Query: 771 PPXGARPXPXXXXLPPXXPPXAPPXXXXXG-XXPLRAXXXPXXP 899
PP P P PP P +PP G P RA P P
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +3
Query: 771 PPXGARPXPXXXXLPPXXPPXAPPXXXXXG-XXPLRAXXXPXXP 899
PP P P PP P +PP G P RA P P
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +3
Query: 771 PPXGARPXPXXXXLPPXXPPXAPPXXXXXG-XXPLRAXXXPXXP 899
PP P P PP P +PP G P RA P P
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 435 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 340
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,077,437
Number of Sequences: 27780
Number of extensions: 369173
Number of successful extensions: 1117
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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