BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP02_FL5_A02 (939 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 25 0.99 AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 25 0.99 AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 25 1.3 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 4.0 DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 23 5.3 AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 5.3 AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 5.3 AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 5.3 AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 22 9.2 AB264333-1|BAF44088.1| 36|Apis mellifera ecdysone-induced prot... 22 9.2 >AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein protein. Length = 1124 Score = 25.0 bits (52), Expect = 0.99 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = -1 Query: 564 VEDQESLQTGYTGQRACGFCPXTKXTISF 478 V QE G G+RA FC K T SF Sbjct: 219 VSPQEERPKGINGRRASLFCGLQKYTRSF 247 >AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. Length = 289 Score = 25.0 bits (52), Expect = 0.99 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = -1 Query: 564 VEDQESLQTGYTGQRACGFCPXTKXTISF 478 V QE G G+RA FC K T SF Sbjct: 214 VSPQEERPKGINGRRASLFCGLQKYTRSF 242 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 24.6 bits (51), Expect = 1.3 Identities = 11/24 (45%), Positives = 12/24 (50%) Frame = +3 Query: 771 PPXGARPXPXXXXLPPXXPPXAPP 842 P G+ P P PP PP APP Sbjct: 34 PQRGSPPNPSQGP-PPGGPPGAPP 56 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 23.0 bits (47), Expect = 4.0 Identities = 10/25 (40%), Positives = 12/25 (48%) Frame = +2 Query: 440 RPTTMPVXHYTIGKEIVXLVXGQNP 514 R T PV T+ +V L G NP Sbjct: 901 RLVTFPVWQVTLNARLVELSLGSNP 925 >DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor protein. Length = 459 Score = 22.6 bits (46), Expect = 5.3 Identities = 8/10 (80%), Positives = 9/10 (90%) Frame = -3 Query: 208 PSRHYRSGLR 179 P RHYRSGL+ Sbjct: 139 PLRHYRSGLK 148 >AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. Length = 712 Score = 22.6 bits (46), Expect = 5.3 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = -3 Query: 271 RWSCLWASGHQAGCRAPGSKAPSRHYR 191 RW C W+ G C+A A SR R Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412 >AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. Length = 712 Score = 22.6 bits (46), Expect = 5.3 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = -3 Query: 271 RWSCLWASGHQAGCRAPGSKAPSRHYR 191 RW C W+ G C+A A SR R Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412 >AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. Length = 712 Score = 22.6 bits (46), Expect = 5.3 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = -3 Query: 271 RWSCLWASGHQAGCRAPGSKAPSRHYR 191 RW C W+ G C+A A SR R Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412 >AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein ASP5 protein. Length = 143 Score = 21.8 bits (44), Expect = 9.2 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +2 Query: 425 LVRKMRPTTMPVXHYTIGKEIV 490 ++ K TMP IGKEIV Sbjct: 88 MIVKQLEITMPPEEVVIGKEIV 109 >AB264333-1|BAF44088.1| 36|Apis mellifera ecdysone-induced protein 75 protein. Length = 36 Score = 21.8 bits (44), Expect = 9.2 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = +2 Query: 242 MARCPQTRPSGVETILSTLSSARPE 316 +A+ P + T+ ST+SSA+PE Sbjct: 7 VAQLPHHLSPNMPTMDSTVSSAKPE 31 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 224,756 Number of Sequences: 438 Number of extensions: 5036 Number of successful extensions: 11 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11 length of database: 146,343 effective HSP length: 58 effective length of database: 120,939 effective search space used: 30718506 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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