Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_A01
(839 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor prot... 26 0.50
S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor prot... 23 2.7
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 2.7
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.5
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 3.5
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 6.1
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 6.1
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 22 6.1
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 8.1
>S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor
protein.
Length = 90
Score = 25.8 bits (54), Expect = 0.50
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +1
Query: 370 WVAWLCMLAGAIAVIVRAPKCGPPEPRTWY-ELGPLVGLDLVD 495
WV C I VI++ P CGP ++ +L PL L D
Sbjct: 9 WVGGFCHSIIQIPVIIQLPFCGPNVIDHYFRDLQPLFKLACTD 51
>S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor
protein.
Length = 169
Score = 23.4 bits (48), Expect = 2.7
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +2
Query: 359 SCCSGWPGCA-CSPGLLQSLYAHPSA 433
S CS P A S G L +Y HPSA
Sbjct: 118 STCSSHPTAAFISYGTLFFIYVHPSA 143
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.4 bits (48), Expect = 2.7
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 317 YFSTSSLVIPVNCRLLASSSIFASPFLWSPTTYFASDMST 198
Y+ L +L S FA +W P T+FA+D ++
Sbjct: 91 YWKDERLAFSQEEEVLTLSGDFAEK-IWVPDTFFANDKNS 129
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 3.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 301 EEVLKYADDPFWVNLRWSLFVLF-WVAWLCMLAGAIAVIVRAP 426
E+ K +D W + L LF W+ L +L G +I++AP
Sbjct: 502 EDSTKVKED--WKYVAMVLDRLFLWIFTLAVLVGTAGIILQAP 542
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 3.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 301 EEVLKYADDPFWVNLRWSLFVLF-WVAWLCMLAGAIAVIVRAP 426
E+ K +D W + L LF W+ L +L G +I++AP
Sbjct: 502 EDSTKVKED--WKYVAMVLDRLFLWIFTLAVLVGTAGIILQAP 542
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.0 bits (47), Expect = 3.5
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = -1
Query: 428 LGARTMTAIAPASMHSQATQNNTNSDQRKFT---QKGSSAYFSTSSLVIPVNCRLLASSS 258
LG T P S + NN R T K S A+ SS + + R
Sbjct: 451 LGIDTPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARR---EGI 507
Query: 257 IFASPFLWSPTTYFASDM 204
A+PF SPTT+ +D+
Sbjct: 508 RLAAPFNASPTTWSPADL 525
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 22.2 bits (45), Expect = 6.1
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -3
Query: 672 KINNHSYSDLLNFVKQNFEFVQCVTFVE---HFVSRHLDEHALNFE 544
KINNH Y ++ + +F+ T E + + +++E LN +
Sbjct: 447 KINNHEYKRSVSRESNSNQFILMTTVNEGNNNMAATYMNECLLNIQ 492
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.2 bits (45), Expect = 6.1
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = -1
Query: 254 FASPFLWSPTTYFASDMSTRV 192
F +W+PT Y +++ S+ +
Sbjct: 92 FVRDLIWTPTVYVSNEPSSAI 112
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 22.2 bits (45), Expect = 6.1
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +2
Query: 470 PWSDWTWSMPSN 505
P+ DWTW+ N
Sbjct: 104 PYPDWTWAKNEN 115
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 361 VLFWVAWLCMLAGAIAVIVRAP 426
+ WV L AG + +I +AP
Sbjct: 484 LFLWVFTLACTAGTLGIIFQAP 505
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,695
Number of Sequences: 438
Number of extensions: 4126
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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