Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_P24
         (847 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0377 + 23613181-23613342,23614469-23614501,23614606-236148...    30   2.0  

>03_05_0377 +
           23613181-23613342,23614469-23614501,23614606-23614879,
           23615105-23615585,23616174-23616846
          Length = 540

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 302 HRYSEDGGKSFDTSRQHLQLYYKY 373
           +RY E+ G   DTSRQ +Q Y  Y
Sbjct: 339 NRYKEENGDKVDTSRQQMQRYTHY 362


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,220,808
Number of Sequences: 37544
Number of extensions: 233583
Number of successful extensions: 351
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 351
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)