Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_P23
(864 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 299 2e-82
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 297 1e-81
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 118 8e-28
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 61 2e-10
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.28
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.64
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.5
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 28 1.5
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 28 1.5
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 6.0
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 7.9
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 299 bits (735), Expect = 2e-82
Identities = 140/209 (66%), Positives = 159/209 (76%)
Frame = -2
Query: 758 IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHFPTGHVRASHFCREGLP*QLSVAE 579
I Q+ SSI L G+ N + L P PRIHFP + SV E
Sbjct: 235 IAQVVSSITASLRFAGSLNVDLNEFQTNLVPYPRIHFPLVTYSPIVSAAKAFHESNSVQE 294
Query: 578 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG 399
ITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ +IK++RTIQFVDWCPTG
Sbjct: 295 ITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTG 354
Query: 398 FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 219
FK+GI Y+PP VPG +AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVG
Sbjct: 355 FKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVG 414
Query: 218 EGMEEGEFSEAREDLAALEKDYEEVGMDS 132
EGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 415 EGMEEGEFSEAREDLAALERDYEEVGQDS 443
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 297 bits (729), Expect = 1e-81
Identities = 139/209 (66%), Positives = 158/209 (75%)
Frame = -2
Query: 758 IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHFPTGHVRASHFCREGLP*QLSVAE 579
I Q+ SSI L +G+ N + L P PRIHFP + SV E
Sbjct: 231 IAQVVSSITASLRFEGSLNVDLAEFQTNLVPYPRIHFPLVTYAPIVSAAKAFHESNSVQE 290
Query: 578 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG 399
ITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ TIK KRTIQFVDWCPTG
Sbjct: 291 ITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTG 350
Query: 398 FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 219
FK+GI +PP + G ++AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVG
Sbjct: 351 FKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVG 410
Query: 218 EGMEEGEFSEAREDLAALEKDYEEVGMDS 132
EGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 411 EGMEEGEFSEAREDLAALERDYEEVGQDS 439
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 118 bits (285), Expect = 8e-28
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 4/184 (2%)
Frame = -2
Query: 674 LXPXPRIHF-PTGHVRASHFCREGLP*QLSVAEITNACFEPANQMVKCDPRHGKYMACCM 498
+ P PR+HF G + +SV E+T F+ N MV DPRHG+Y+
Sbjct: 257 MVPFPRLHFFMVGFAPLAAIGSSSFQ-AVSVPELTQQMFDANNMMVAADPRHGRYLTVAA 315
Query: 497 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 318
L+RG V K+V+ I +++TK + FV+W P + PP DL + +
Sbjct: 316 LFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPK-----DL---KMSATF 367
Query: 317 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEE 147
+ N+T+I E + RL +F M+ ++AF+HWY GEGM+E EF+EA DL + + Y+E
Sbjct: 368 IGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 427
Query: 146 VGMD 135
G+D
Sbjct: 428 AGID 431
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 61.3 bits (142), Expect = 2e-10
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Frame = -2
Query: 590 SVAEITNACFEPANQMVKCDP-RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 414
+V ++ P NQMV +P + +++ + +G+ P DV+ ++ I+ +R F+
Sbjct: 291 TVLDVMRRLLLPKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIP 350
Query: 413 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV 234
W P +V ++ + P + ++ + ML+N T+IA + R ++D + + AF+
Sbjct: 351 WGPASIQVALSKKSPYIKTNHRVSGL-----MLANHTSIASLFKRTLDQYDRLRKRNAFL 405
Query: 233 HWYVGEGMEE---GEFSEAREDLAALEKDYE 150
Y E + E EF +R+ +A L +YE
Sbjct: 406 EQYKKEAIFEDDLNEFDSSRDVVADLINEYE 436
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.28
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 490 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 356
VV P + RP++P P LS V PV+ V + PP P
Sbjct: 552 VVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.5 bits (63), Expect = 0.64
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Frame = -3
Query: 655 STFPLVTYGPVISAEKAYHDSFP---SPRSQTHASSPPTRW*NATPVMASTWLAVCCTVV 485
ST T PV S+ S P +P + T+ ++ + +TPV ++ CT
Sbjct: 499 STSVPYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTS 558
Query: 484 TSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 374
TS P T P S ++ S++ PV+ + TTS
Sbjct: 559 TSVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTS 594
Score = 28.7 bits (61), Expect = 1.1
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = -3
Query: 664 TPVSTFPLVTYGPVISAEKAYHDS--FPSPRSQTHASSPPTRW*NATPVMASTWLAVCCT 491
TPV++ PL T S Y + +P + T+ ++ + +TPV +S + T
Sbjct: 461 TPVTSTPLTTTNCTTSTSIPYTSTPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSST 520
Query: 490 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQ-PVSRSVSTTS 374
VTS P T + + SVL S+ P++ + TTS
Sbjct: 521 PVTSTPV--TTTNCTTSTSVLYTSTPVTSTPLATTNCTTS 558
Score = 26.6 bits (56), Expect = 4.5
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = -3
Query: 595 SFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSS 416
S +P + T+ ++ + +TPV ++ CT TS P T + S P +N +
Sbjct: 417 SSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPY--TSTPVTSTPLTTTNCT 474
Query: 415 TGVQPVSRSVSTTSHP 368
T S TS P
Sbjct: 475 TSTSIPYTSTPVTSTP 490
Score = 26.2 bits (55), Expect = 6.0
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Frame = -3
Query: 655 STFPLVTYGPVISAEKAYHDS--FPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVT 482
S+ PL T S Y + +P + T+ ++ + +TPV ++ CT T
Sbjct: 418 SSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSTPLTTTNCTTST 477
Query: 481 SYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 374
S P T + S P +N +T S TS
Sbjct: 478 SIPY--TSTPVTSTPLTTTNCTTSTSVPYTSTPVTS 511
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 578 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 453
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 450 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGK 593
S G +LGY ++ A++V+A + V HL+ G D + K
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK 454
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -3
Query: 286 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 113
G+ TS TS T S S++ S+P P W P+ S+ TP+ V
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207
Query: 112 EPKSTK 95
EP+ TK
Sbjct: 208 EPRFTK 213
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -3
Query: 454 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 368
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 473 WVRRHHGTAYSKPCTCHDGG 532
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,064,369
Number of Sequences: 5004
Number of extensions: 63422
Number of successful extensions: 237
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 232
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 430470850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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