Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_P23
(864 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 326 9e-90
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 326 9e-90
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 326 9e-90
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 325 3e-89
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 325 3e-89
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 310 8e-85
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 225 3e-59
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 113 1e-25
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 111 6e-25
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 111 8e-25
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 111 8e-25
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 111 8e-25
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 110 1e-24
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 109 2e-24
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 109 2e-24
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 108 5e-24
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 59 4e-09
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 56 3e-08
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 33 0.32
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 33 0.32
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.7
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 30 2.3
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 29 5.3
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 7.0
At1g68080.1 68414.m07777 expressed protein 28 7.0
At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase... 28 7.0
At3g26855.1 68416.m03360 hypothetical protein 28 9.2
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 326 bits (802), Expect = 9e-90
Identities = 152/218 (69%), Positives = 172/218 (78%), Gaps = 1/218 (0%)
Frame = -2
Query: 785 QPTPTXIXX-IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHFPTGHVRASHFCRE 609
+PT T + + Q+ SS+ L DGA N + L P PRIHF +
Sbjct: 221 RPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEK 280
Query: 608 GLP*QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRT 429
QLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT
Sbjct: 281 AFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRT 340
Query: 428 IQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA 249
IQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYA
Sbjct: 341 IQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYA 400
Query: 248 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 135
KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 401 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 326 bits (802), Expect = 9e-90
Identities = 152/218 (69%), Positives = 172/218 (78%), Gaps = 1/218 (0%)
Frame = -2
Query: 785 QPTPTXIXX-IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHFPTGHVRASHFCRE 609
+PT T + + Q+ SS+ L DGA N + L P PRIHF +
Sbjct: 221 RPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEK 280
Query: 608 GLP*QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRT 429
QLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT
Sbjct: 281 AFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRT 340
Query: 428 IQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA 249
IQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYA
Sbjct: 341 IQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYA 400
Query: 248 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 135
KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 401 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 326 bits (802), Expect = 9e-90
Identities = 152/218 (69%), Positives = 172/218 (78%), Gaps = 1/218 (0%)
Frame = -2
Query: 785 QPTPTXIXX-IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHFPTGHVRASHFCRE 609
+PT T + + Q+ SS+ L DGA N + L P PRIHF +
Sbjct: 221 RPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEK 280
Query: 608 GLP*QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRT 429
QLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT
Sbjct: 281 AFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRT 340
Query: 428 IQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA 249
IQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYA
Sbjct: 341 IQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYA 400
Query: 248 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 135
KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 401 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 325 bits (798), Expect = 3e-89
Identities = 154/218 (70%), Positives = 170/218 (77%), Gaps = 1/218 (0%)
Frame = -2
Query: 785 QPTPTXIXX-IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHFPTGHVRASHFCRE 609
+PT T + I QI SS+ L DGA N + L P PRIHF +
Sbjct: 221 RPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAK 280
Query: 608 GLP*QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRT 429
QLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT
Sbjct: 281 AYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRT 340
Query: 428 IQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA 249
+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYA
Sbjct: 341 VQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYA 400
Query: 248 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 135
KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 401 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 325 bits (798), Expect = 3e-89
Identities = 154/218 (70%), Positives = 170/218 (77%), Gaps = 1/218 (0%)
Frame = -2
Query: 785 QPTPTXIXX-IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHFPTGHVRASHFCRE 609
+PT T + I QI SS+ L DGA N + L P PRIHF +
Sbjct: 221 RPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAK 280
Query: 608 GLP*QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRT 429
QLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT
Sbjct: 281 AYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRT 340
Query: 428 IQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA 249
+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYA
Sbjct: 341 VQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYA 400
Query: 248 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 135
KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 401 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 310 bits (761), Expect = 8e-85
Identities = 144/206 (69%), Positives = 159/206 (77%)
Frame = -2
Query: 758 IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHFPTGHVRASHFCREGLP*QLSVAE 579
I Q SS+ L DGA N + L P PRIHF + Q SV E
Sbjct: 231 ISQTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPE 290
Query: 578 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG 399
IT + FEP+N M KCDPRHGKYMACC++YRGDVVPKDVN A+A IK KRTIQFVDWCPTG
Sbjct: 291 ITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTG 350
Query: 398 FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 219
FK GINYQPP+VVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMY+KRAFVHWYVG
Sbjct: 351 FKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVG 410
Query: 218 EGMEEGEFSEAREDLAALEKDYEEVG 141
EGMEEGEFSEAREDLAALEKDYEEVG
Sbjct: 411 EGMEEGEFSEAREDLAALEKDYEEVG 436
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 225 bits (550), Expect = 3e-59
Identities = 106/166 (63%), Positives = 122/166 (73%), Gaps = 1/166 (0%)
Frame = -2
Query: 785 QPTPTXIXX-IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHFPTGHVRASHFCRE 609
+PT T + + Q+ SS+ L DGA N + L P PRIHF +
Sbjct: 221 RPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEK 280
Query: 608 GLP*QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRT 429
QLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT
Sbjct: 281 AFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRT 340
Query: 428 IQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 291
IQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE
Sbjct: 341 IQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAE 386
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 113 bits (272), Expect = 1e-25
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 2/206 (0%)
Frame = -2
Query: 758 IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHF-PTGHVR-ASHFCREGLP*QLSV 585
I S + L G N L P PR+HF G S ++ + L+V
Sbjct: 230 ISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYI--SLTV 287
Query: 584 AEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCP 405
E+T ++ N M DPRHG+Y+ ++RG + K+V+ I ++ K + FV+W P
Sbjct: 288 PELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIP 347
Query: 404 TGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY 225
K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY
Sbjct: 348 NNVKSSVCDIPPT--------GIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 399
Query: 224 VGEGMEEGEFSEAREDLAALEKDYEE 147
GEGM+E EF+EA ++ L +Y++
Sbjct: 400 TGEGMDEMEFTEAESNMNDLVSEYQQ 425
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 111 bits (267), Expect = 6e-25
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 2/206 (0%)
Frame = -2
Query: 758 IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHF-PTGHVR-ASHFCREGLP*QLSV 585
I S + L G N L P PR+HF G S ++ + L+V
Sbjct: 230 ISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYI--SLTV 287
Query: 584 AEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCP 405
E+T ++ N M DPRHG+Y+ ++RG + K+V+ I I+ K + FV+W P
Sbjct: 288 PELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIP 347
Query: 404 TGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY 225
K + PP ++ A + N+T+I E + R+ +F M+ ++AF+HWY
Sbjct: 348 NNVKSSVCDIPPK--------GLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWY 399
Query: 224 VGEGMEEGEFSEAREDLAALEKDYEE 147
GEGM+E EF+EA ++ L +Y++
Sbjct: 400 TGEGMDEMEFTEAESNMNDLVAEYQQ 425
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 111 bits (266), Expect = 8e-25
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Frame = -2
Query: 758 IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHF-PTGHVRASHFCREGLP*QLSVA 582
I S + L G N L P PR+HF G + + L+V
Sbjct: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR-SLTVP 287
Query: 581 EITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPT 402
E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 288 ELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPN 347
Query: 401 GFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYV 222
K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY
Sbjct: 348 NVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 399
Query: 221 GEGMEEGEFSEAREDLAALEKDYEE 147
GEGM+E EF+EA ++ L +Y++
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 111 bits (266), Expect = 8e-25
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Frame = -2
Query: 758 IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHF-PTGHVRASHFCREGLP*QLSVA 582
I S + L G N L P PR+HF G + + L+V
Sbjct: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR-SLTVP 287
Query: 581 EITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPT 402
E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 288 ELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPN 347
Query: 401 GFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYV 222
K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY
Sbjct: 348 NVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 399
Query: 221 GEGMEEGEFSEAREDLAALEKDYEE 147
GEGM+E EF+EA ++ L +Y++
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQ 424
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 111 bits (266), Expect = 8e-25
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Frame = -2
Query: 758 IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHF-PTGHVRASHFCREGLP*QLSVA 582
I S + L G N L P PR+HF G + + L+V
Sbjct: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR-NLTVP 287
Query: 581 EITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPT 402
E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 288 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPN 347
Query: 401 GFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYV 222
K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY
Sbjct: 348 NVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 399
Query: 221 GEGMEEGEFSEAREDLAALEKDYEE 147
GEGM+E EF+EA ++ L +Y++
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 110 bits (265), Expect = 1e-24
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Frame = -2
Query: 758 IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHF-PTGHVRASHFCREGLP*QLSVA 582
I S + L G N L P PR+HF G + + L+V
Sbjct: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR-ALTVP 287
Query: 581 EITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPT 402
E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 288 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPN 347
Query: 401 GFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYV 222
K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY
Sbjct: 348 NVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 399
Query: 221 GEGMEEGEFSEAREDLAALEKDYEE 147
GEGM+E EF+EA ++ L +Y++
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 109 bits (263), Expect = 2e-24
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Frame = -2
Query: 758 IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHF-PTGHVRASHFCREGLP*QLSVA 582
I S + L G N L P PR+HF G + + LSV
Sbjct: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYS-ALSVP 287
Query: 581 EITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPT 402
E+T ++ N M DPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P
Sbjct: 288 ELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPN 347
Query: 401 GFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYV 222
K + + P G ++ A + N+T+I E + R+ +F M+ ++AF+HWY
Sbjct: 348 NVKSSVC----DIAPKG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 399
Query: 221 GEGMEEGEFSEAREDLAALEKDYEE 147
GEGM+E EF+EA ++ L +Y++
Sbjct: 400 GEGMDEMEFTEAESNMNDLVAEYQQ 424
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 109 bits (262), Expect = 2e-24
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Frame = -2
Query: 758 IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHF-PTGHVRASHFCREGLP*QLSVA 582
I S + L G N L P PR+HF G + + LSV
Sbjct: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYS-ALSVP 287
Query: 581 EITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPT 402
E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 288 ELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPN 347
Query: 401 GFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYV 222
K + + P G ++ A + N+T+I E + R+ +F M+ ++AF+HWY
Sbjct: 348 NVKSSVC----DIAPTG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 399
Query: 221 GEGMEEGEFSEAREDLAALEKDYEE 147
GEGM+E EF+EA ++ L +Y++
Sbjct: 400 GEGMDEMEFTEAESNMNDLVAEYQQ 424
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 108 bits (259), Expect = 5e-24
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 1/205 (0%)
Frame = -2
Query: 758 IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHF-PTGHVRASHFCREGLP*QLSVA 582
I S + L G N L P PR+HF G + + L+V
Sbjct: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR-ALTVP 287
Query: 581 EITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPT 402
E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 288 ELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPN 347
Query: 401 GFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYV 222
K + + P G + A + N+T+I E + R+ +F M+ ++AF+HWY
Sbjct: 348 NVKSSVC----DIAPRG----LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 399
Query: 221 GEGMEEGEFSEAREDLAALEKDYEE 147
GEGM+E EF+EA ++ L +Y++
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 58.8 bits (136), Expect = 4e-09
Identities = 48/213 (22%), Positives = 98/213 (46%), Gaps = 10/213 (4%)
Frame = -2
Query: 758 IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHF-PTGHVRASHFCREGLP*QLSVA 582
+ + S+ L G N L P PR HF TG+ + + + + +V
Sbjct: 232 VSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVL 291
Query: 581 EITNACFEPANQMVKCDPRH-----GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 417
++ + N MV R+ KY++ + +G+V P V+ ++ I+ ++ + F+
Sbjct: 292 DVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFI 351
Query: 416 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAF 237
DW P +V ++ + P V ++ + ML++ T+I ++R ++D + K+AF
Sbjct: 352 DWGPASIQVALSKKSPYVQTSHRVSGL-----MLASHTSIRHLFSRCLSQYDKLRKKQAF 406
Query: 236 VHWYVGEGM----EEGEFSEAREDLAALEKDYE 150
+ Y M + EF E+R+ + +L +Y+
Sbjct: 407 LDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 56.0 bits (129), Expect = 3e-08
Identities = 46/213 (21%), Positives = 98/213 (46%), Gaps = 10/213 (4%)
Frame = -2
Query: 758 IGQIXSSIXGXLXXDGAXNGTSPXSRXXLXPXPRIHF-PTGHVRASHFCREGLP*QLSVA 582
+ + S+ L G N L P PR HF TG+ + + + + +V
Sbjct: 232 VSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVL 291
Query: 581 EITNACFEPANQMVKCDPRH-----GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 417
++ + N MV R+ KY++ + +G+V P V+ ++ I+ ++ + F+
Sbjct: 292 DVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFI 351
Query: 416 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAF 237
+W P +V ++ + P V ++ + ML++ T+I +++ ++D + K+AF
Sbjct: 352 EWGPASIQVALSKKSPYVQTAHRVSGL-----MLASHTSIRHLFSKCLSQYDKLRKKQAF 406
Query: 236 VHWYVGEGM----EEGEFSEAREDLAALEKDYE 150
+ Y M + EF E+R+ + +L +Y+
Sbjct: 407 LDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 280 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 173
A ++S + +P+V+S S R WR SS P+R W
Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 456 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLE 563
GRV I Y D + + H H L TG+ HH+ G++
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGVK 95
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 375 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 479
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/85 (25%), Positives = 36/85 (42%)
Frame = -3
Query: 619 SAEKAYHDSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSK 440
+A K++ S P S+ S PP + P+ S + S P + + PS+
Sbjct: 508 AASKSFPISQPPTTSKPFVSQPPN---TSKPMPVSQPPTTSKPLPVSQPPPTFQSTCPSQ 564
Query: 439 PSVLSNSSTGVQPVSRSVSTTSHPP 365
P S+S + + PV S + PP
Sbjct: 565 PPAASSSLSPLPPVFNSTQSFQSPP 589
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
(NR2) {Arabidopsis thaliana}
Length = 917
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 152 RNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRT 268
R +R +PG +G+ R+ PP P R S + H +T +T
Sbjct: 8 RQYARLEPGLNGVVRSYKPPVPGRSDSPKAHQNQTTNQT 46
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -2
Query: 491 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 348
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 417 DELDSTLGFDGSDGRVHILGYDVTTVQ 497
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK4) identical to MAP kinase kinase
4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830
gi_13265419
Length = 366
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +2
Query: 65 ASAP*KIFHWLSTLRLPHPRLQRSPCRLLRNPS--RGQPG----PHGLRRTLPPPYPHRR 226
A+A + H++S P +RS +LL++P R P P L + LPPP P
Sbjct: 301 ATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQNRSPQNLHQLLPPPRPLSS 360
Query: 227 TSA 235
+S+
Sbjct: 361 SSS 363
>At3g26855.1 68416.m03360 hypothetical protein
Length = 163
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 259 SCTPSVLSCTGTSVRVWRRESSPK 188
SC P +LS + VR W +SSPK
Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,950,469
Number of Sequences: 28952
Number of extensions: 378540
Number of successful extensions: 1324
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2019160800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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