Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_P22
         (848 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    26   0.33 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    24   1.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.3  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       23   3.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   5.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   5.3  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   7.0  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.3  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 264 CGHPQCVSRGLFCH 223
           CG   C+ RGLFC+
Sbjct: 124 CGDGNCIERGLFCN 137



 Score = 22.6 bits (46), Expect = 4.0
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = -3

Query: 195 PPRCFPSAMTCPSSXRGLWRVL 130
           P RC  +  +CP+    +W ++
Sbjct: 346 PHRCHGNLQSCPTRSHAVWEMV 367


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 575 NLCPGVKYRFALLRTPXILDATWLCLXMTPKLDIARN 685
           +LC  + Y F       + DA W  L + P+LD+ +N
Sbjct: 49  DLCTHIVYSFI-----GVNDADWSVLVIDPELDVDQN 80


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 264 CGHPQCVSRGLFCH 223
           CG+ +C+ + LFC+
Sbjct: 116 CGNGECIDKELFCN 129



 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -3

Query: 195 PPRCFPSAMTCPSSXRGLWRVL 130
           P +C  +A  CPS    +W ++
Sbjct: 338 PHKCNGNAHNCPSRSHPVWEIV 359


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 264 CGHPQCVSRGLFCH 223
           CG+ +C+ + LFC+
Sbjct: 123 CGNGECIDKELFCN 136



 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -3

Query: 195 PPRCFPSAMTCPSSXRGLWRVL 130
           P +C  +A  CPS    +W ++
Sbjct: 345 PHKCNGNAHNCPSRSHPVWEIV 366


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = -1

Query: 701 DXWGRHFERCPVSESXEGKAKXRPKXWESSTERSG 597
           D   RHFE    +     KAK     W+ S E  G
Sbjct: 90  DRHERHFESSFGNNLHSEKAKFNESKWQDSGESPG 124


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 394 GNRSPSADPEVPNDP 438
           G  SP  DPE+P  P
Sbjct: 76  GTTSPEPDPEIPVAP 90


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 265 LRSSTVRFQRSFLPRTIRLWNELPST 188
           L    VRF +     T++LW++L ST
Sbjct: 79  LEQFIVRFMKYHFFGTLKLWSQLFST 104


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = +1

Query: 319 KNEMPV--SSRTIPQSTPHGTYGTKYRGNRSPSADP 420
           K E P   S R     TPHG+  +      SPSA P
Sbjct: 239 KKESPQMQSYRPTGNITPHGSNTSSLITTPSPSASP 274


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 11/45 (24%), Positives = 18/45 (40%)
 Frame = +1

Query: 553 GLVLYKAKPLSRREVPLRSVEDSXHFGRXLALPSNDSETGHRSKC 687
           G+ + K +   +RE+  +S   S H        S  S+     KC
Sbjct: 369 GMKIVKKRRKDKREITRKSTSSSTHTSSQQTSDSFLSKRNSEKKC 413


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,199
Number of Sequences: 336
Number of extensions: 5089
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)