Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_P20
         (803 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   2.8  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   5.0  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   6.6  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   8.7  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 713 RRFFIAQCCILSSKRWALQITSHRXRYK 796
           RR  IA C  LS K+  +   + R +YK
Sbjct: 146 RRIEIATCLRLSEKQVKIWFQNRRVKYK 173


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 550 RFYKVVTYAIFVNTEMSMRKYIF*WFLLVTTREMFTFTD 434
           +FYK    AIF   + S+ K I    + + +   +TF D
Sbjct: 68  QFYKTAYSAIFTVIDFSLCKAILVHAITIRSTFSWTFID 106


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +2

Query: 242 GFVPKLKIEYVFFFLIIIRCDNVTHANYVIF 334
           G +P+ KI+ V   L+I+    +  + Y++F
Sbjct: 275 GIIPRAKIKTVKMTLVIVFVFVLCWSPYIVF 305


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 26  RNHPEKSMRFNLRVEYVHR 82
           RN PEK +  N   EY+ R
Sbjct: 97  RNSPEKRLTLNGIYEYIMR 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,042
Number of Sequences: 336
Number of extensions: 3835
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)