Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_P20
         (803 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0017 - 114497-114547,114700-114816,114917-114997,115312-11...    30   2.5  

>07_01_0017 -
           114497-114547,114700-114816,114917-114997,115312-115371,
           116029-116238,116412-116720,116790-117080
          Length = 372

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 484 KCIFSYSFQY*QKLHK*RLYRTVCANIVFQCIDLISCPDXYI 609
           K + S+ FQ  Q +H+  L+  V   I+  C+  I CPD +I
Sbjct: 226 KLVPSHIFQVNQPMHRLPLH--VLHGIIVLCVSAIGCPDAFI 265


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,644,407
Number of Sequences: 37544
Number of extensions: 318166
Number of successful extensions: 514
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)