Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_P20
         (803 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001427-1|AAH01427.2|  364|Homo sapiens solute carrier family 3...    30   8.5  
AK027747-1|BAB55339.1|  246|Homo sapiens protein ( Homo sapiens ...    30   8.5  
AK027394-1|BAB55080.1|  364|Homo sapiens protein ( Homo sapiens ...    30   8.5  
AK002182-1|BAA92126.1|  351|Homo sapiens protein ( Homo sapiens ...    30   8.5  
AF326199-1|AAK51705.1|  364|Homo sapiens GDP-fucose transporter ...    30   8.5  
AF323970-1|AAK50397.1|  364|Homo sapiens GDP-fucose transporter ...    30   8.5  

>BC001427-1|AAH01427.2|  364|Homo sapiens solute carrier family 35,
           member C1 protein.
          Length = 364

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -3

Query: 186 GCIVGVYWWGIATSAAARL--GIETIFNHIKNYLVVIRCTYSTRKLKRIDFSGWFL 25
           G I+G +W G+    A      + T+F  + +  V +   Y+T+ L  +D S W L
Sbjct: 175 GIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRL 230


>AK027747-1|BAB55339.1|  246|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14841 fis, clone OVARC1002158. ).
          Length = 246

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -3

Query: 186 GCIVGVYWWGIATSAAARL--GIETIFNHIKNYLVVIRCTYSTRKLKRIDFSGWFL 25
           G I+G +W G+    A      + T+F  + +  V +   Y+T+ L  +D S W L
Sbjct: 175 GIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRL 230


>AK027394-1|BAB55080.1|  364|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14488 fis, clone MAMMA1002844, weakly similar to
           TRIOSE PHOSPHATE/PHOSPHATE TRANSLOCATOR, NON-GREEN
           PLASTID ).
          Length = 364

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -3

Query: 186 GCIVGVYWWGIATSAAARL--GIETIFNHIKNYLVVIRCTYSTRKLKRIDFSGWFL 25
           G I+G +W G+    A      + T+F  + +  V +   Y+T+ L  +D S W L
Sbjct: 175 GIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRL 230


>AK002182-1|BAA92126.1|  351|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11320 fis, clone PLACE1010321. ).
          Length = 351

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -3

Query: 186 GCIVGVYWWGIATSAAARL--GIETIFNHIKNYLVVIRCTYSTRKLKRIDFSGWFL 25
           G I+G +W G+    A      + T+F  + +  V +   Y+T+ L  +D S W L
Sbjct: 162 GIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRL 217


>AF326199-1|AAK51705.1|  364|Homo sapiens GDP-fucose transporter
           protein.
          Length = 364

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -3

Query: 186 GCIVGVYWWGIATSAAARL--GIETIFNHIKNYLVVIRCTYSTRKLKRIDFSGWFL 25
           G I+G +W G+    A      + T+F  + +  V +   Y+T+ L  +D S W L
Sbjct: 175 GIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRL 230


>AF323970-1|AAK50397.1|  364|Homo sapiens GDP-fucose transporter
           protein.
          Length = 364

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -3

Query: 186 GCIVGVYWWGIATSAAARL--GIETIFNHIKNYLVVIRCTYSTRKLKRIDFSGWFL 25
           G I+G +W G+    A      + T+F  + +  V +   Y+T+ L  +D S W L
Sbjct: 175 GIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRL 230


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,490,315
Number of Sequences: 237096
Number of extensions: 1774540
Number of successful extensions: 4480
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4480
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)