Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_P19
         (806 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0689 + 18746735-18748296,18748401-18748485                       91   1e-18
11_03_0216 + 11821726-11821860,11823217-11823286,11823704-118238...    33   0.35 
12_01_0511 + 4049760-4049967,4050096-4050166,4051306-4051364,405...    32   0.47 
03_01_0340 - 2680860-2682197                                           29   4.4  
06_01_0246 - 1856617-1856658,1856756-1856797,1856908-1857035,185...    28   7.6  

>04_03_0689 + 18746735-18748296,18748401-18748485
          Length = 548

 Score = 91.1 bits (216), Expect = 1e-18
 Identities = 48/142 (33%), Positives = 78/142 (54%)
 Frame = -1

Query: 554 FGAPRVKXAEVPARXXALXHAPDPXVINHVIAVEPPHDAKQTAXYDIDVEVDDTLKAQMN 375
           FG  +++ A +  +       P P  + H I +   + A  +A YD+ V+V   L+ +M+
Sbjct: 381 FGEDKLRFAMLSQKISQHLSPPPPINLEHKIKLSG-NGAHASACYDVIVDVPFPLQKEMS 439

Query: 374 NFLXSTANQQEIQGLDSKIHETVDTINQLKTNREFFLSFSKDPQQFIQKWLVSQSRDLKS 195
            FL +T   ++I+  D  I  ++  I++ +  R FFL FS+ P +FI   + SQS+DLK 
Sbjct: 440 AFLANTEKHKDIEACDEVISASIKKIHEHRRRRAFFLGFSQSPVEFINALIASQSKDLKL 499

Query: 194 VSGGASGNPEEERRAQFYCAGW 129
           ++G A+ N E ERRA FY   W
Sbjct: 500 IAGEANRNIERERRADFYNQPW 521


>11_03_0216 +
           11821726-11821860,11823217-11823286,11823704-11823861,
           11824304-11824479,11824564-11824612,11825293-11825430
          Length = 241

 Score = 32.7 bits (71), Expect = 0.35
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -1

Query: 290 LKTNREFFLSFSKDPQQFIQKWLVSQSR-DLKSVSGGASGNPEEERRAQFYCAGWAG 123
           + T R F  + S   Q +++  L    R D+  +SGG+SG+ + E      C+G AG
Sbjct: 146 INTTRPFMRNVSAVDQSWVKPILKKLERLDMNKLSGGSSGSKDPEPLEDKQCSGGAG 202


>12_01_0511 +
           4049760-4049967,4050096-4050166,4051306-4051364,
           4052424-4052549,4052943-4053037,4053263-4053312
          Length = 202

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +3

Query: 516 RRHLGXLDARCPERSAXGXGRRPLYSRSCGVLXAG 620
           RR +G    RC E SA   GRR   SR  GV+ +G
Sbjct: 11  RRWVGSARGRCAEESASAAGRRRSRSRPVGVIWSG 45


>03_01_0340 - 2680860-2682197
          Length = 445

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 363 QHRQPAGDPRPRLQDPRDCGHHQPVENKP 277
           + ++P   PRPR  DP   G +  VE KP
Sbjct: 156 RRKEPPRPPRPRPVDPDGAGDNAQVERKP 184


>06_01_0246 -
           1856617-1856658,1856756-1856797,1856908-1857035,
           1857311-1857518,1857617-1857797,1858227-1858271,
           1858565-1858918,1860282-1860325
          Length = 347

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
 Frame = +1

Query: 433 CLASCGGSTAMTWLMTMGS--GACXRAXXRAGTSAXLTRGAPKDLLXVXVAGHCTRARAG 606
           C    GG++ +  + ++G   GA       A +     +  P D +    +GHC  +  G
Sbjct: 16  CEDHVGGTSGLADVSSLGDFPGATTLKESTASSPTSSLQAVPDDTIDAPQSGHCLSSSLG 75

Query: 607 SCXRVRLPXTXQRAXHYXR 663
           S   V+ P   +   ++ R
Sbjct: 76  SIIWVQKPPHGRPGVYHIR 94


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,572,318
Number of Sequences: 37544
Number of extensions: 267359
Number of successful extensions: 1016
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)