Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_P19
(806 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47357-5|CAA87424.1| 446|Caenorhabditis elegans Hypothetical pr... 130 2e-30
AF000265-9|AAB52943.2| 449|Caenorhabditis elegans Hypothetical ... 107 9e-24
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 33 0.32
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 33 0.32
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 30 1.7
AF068713-4|AAC17795.2| 398|Caenorhabditis elegans Hypothetical ... 29 5.2
AF000193-1|AAB52891.1| 715|Caenorhabditis elegans Hypothetical ... 29 5.2
AF043693-3|AAB97537.1| 207|Caenorhabditis elegans Hypothetical ... 28 6.8
U28991-2|AAK68307.1| 679|Caenorhabditis elegans Kinesin-associa... 28 9.0
U28991-1|AAM22059.1| 696|Caenorhabditis elegans Kinesin-associa... 28 9.0
AF149287-1|AAF99086.1| 696|Caenorhabditis elegans KAP protein. 28 9.0
AB017107-1|BAA88838.1| 679|Caenorhabditis elegans Kinesin assoc... 28 9.0
>Z47357-5|CAA87424.1| 446|Caenorhabditis elegans Hypothetical
protein ZK1128.5 protein.
Length = 446
Score = 130 bits (313), Expect = 2e-30
Identities = 72/178 (40%), Positives = 104/178 (58%)
Frame = -1
Query: 674 KTRARX*XNALWXVXGRRTRXQDPARARVQWPATXTXSRSFGAPRVKXAEVPARXXALXH 495
+TR R ALW + + QDP + R + FG +++ E+P R L
Sbjct: 240 ETRPRI-IEALWQYI-KTHKLQDP-QDRDTINNDLFLEQCFGVSKMRFMEIPQRLHQLLQ 296
Query: 494 APDPXVINHVIAVEPPHDAKQTAXYDIDVEVDDTLKAQMNNFLXSTANQQEIQGLDSKIH 315
PDP V+NH+I K +A YDIDVE++D +K QM NF+ + N +IQ LD KI
Sbjct: 297 QPDPLVLNHIIQRPDDGQDKTSACYDIDVELEDPVKQQMANFVHNQTNANDIQLLDQKIF 356
Query: 314 ETVDTINQLKTNREFFLSFSKDPQQFIQKWLVSQSRDLKSVSGGASGNPEEERRAQFY 141
+ VD IN++K R+FFL FS +P FI+KW+VSQ+ DLK+++ +SG+ E +R A Y
Sbjct: 357 DLVDQINEMKLRRDFFLRFSNEPSGFIKKWVVSQNSDLKTLT-ESSGDGESDRYATTY 413
>AF000265-9|AAB52943.2| 449|Caenorhabditis elegans Hypothetical
protein C18E3.2 protein.
Length = 449
Score = 107 bits (257), Expect = 9e-24
Identities = 53/141 (37%), Positives = 84/141 (59%)
Frame = -1
Query: 563 SRSFGAPRVKXAEVPARXXALXHAPDPXVINHVIAVEPPHDAKQTAXYDIDVEVDDTLKA 384
S+ FG R++ EVP + L DP NH+I + + YDIDVE++D +K
Sbjct: 277 SQCFGVNRMRFMEVPNKLHQLLQQTDPLEFNHIIQRPKEGQEQVSTCYDIDVEMEDPVKQ 336
Query: 383 QMNNFLXSTANQQEIQGLDSKIHETVDTINQLKTNREFFLSFSKDPQQFIQKWLVSQSRD 204
M+ F+ S +IQ LD K ++ ++ IN+LKT R+F+ F +P +FI+ W++SQ+ D
Sbjct: 337 FMHTFVHSPGLANDIQTLDQKCYDIIEQINELKTRRDFYARFYTEPAEFIKSWVMSQNSD 396
Query: 203 LKSVSGGASGNPEEERRAQFY 141
LK+++ SG+ E ER A+ Y
Sbjct: 397 LKTMN-ELSGDLEAERFAESY 416
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 32.7 bits (71), Expect = 0.32
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Frame = -1
Query: 449 PHDAKQTAXYDIDVEVDDTLKAQMNNFLXSTANQQEIQG---LDSKIHETVDTINQLKTN 279
P A A DVE + +++ + ++ Q+ + LD K+ T++ I +L
Sbjct: 673 PSPATTDAWMQTDVEEQLMVSPEVSLVSEAPSSLQDSRRSSHLDEKLRRTIEKIGELLAE 732
Query: 278 REFFLSFSKDPQQFIQKWLVSQSRDLKSVSGGASGNPEEER 156
E F +DP+ + S+ LKS+ GA+ ER
Sbjct: 733 HESFQESLRDPEFHTAEAFRKISQLLKSILSGANSEEMLER 773
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 32.7 bits (71), Expect = 0.32
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Frame = -1
Query: 449 PHDAKQTAXYDIDVEVDDTLKAQMNNFLXSTANQQEIQG---LDSKIHETVDTINQLKTN 279
P A A DVE + +++ + ++ Q+ + LD K+ T++ I +L
Sbjct: 673 PSPATTDAWMQTDVEEQLMVSPEVSLVSEAPSSLQDSRRSSHLDEKLRRTIEKIGELLAE 732
Query: 278 REFFLSFSKDPQQFIQKWLVSQSRDLKSVSGGASGNPEEER 156
E F +DP+ + S+ LKS+ GA+ ER
Sbjct: 733 HESFQESLRDPEFHTAEAFRKISQLLKSILSGANSEEMLER 773
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 225 PLLDELLRILAEAQEELAVCFQLVDGVHSL 314
P +E+ IL Q++L QL+DG+HSL
Sbjct: 432 PKFEEVKTILVTFQQDLGSLRQLIDGIHSL 461
>AF068713-4|AAC17795.2| 398|Caenorhabditis elegans Hypothetical
protein T24A6.8 protein.
Length = 398
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -3
Query: 357 RQPAGDPRPRLQDPRDCGHHQPVENKPRVLLELQQ 253
RQP G RP + +P C H P R+ ++ +
Sbjct: 262 RQPDGTQRPGVNEPHYCAHTVPFGPMKRIKIQFNE 296
>AF000193-1|AAB52891.1| 715|Caenorhabditis elegans Hypothetical
protein T20B6.2 protein.
Length = 715
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 222 EPLLDELLRILAEAQEELAVCFQLVDGVHSL 314
+P +E+ IL Q+ L QL++G+HSL
Sbjct: 188 DPKFEEVKTILVTFQQHLVSLKQLIEGIHSL 218
>AF043693-3|AAB97537.1| 207|Caenorhabditis elegans Hypothetical
protein C34B2.5 protein.
Length = 207
Score = 28.3 bits (60), Expect = 6.8
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = -1
Query: 398 DTLKAQMNNFLXSTANQQEIQGLDSKIHETVDTINQLKTN-REFFLSFSKDPQQFIQKWL 222
D+LK + NNF AN E + + K E + + T + LS S ++KW
Sbjct: 19 DSLKKEGNNFF---ANG-EFEKANEKYQEAIASCPPTSTEVQSILLSNSAAALIKLRKWE 74
Query: 221 VSQSRDLKSVSGGASGNPEEERRAQFY 141
+ KS+ GA+ ERRA Y
Sbjct: 75 SAVEAASKSIEIGATNEKALERRAFAY 101
>U28991-2|AAK68307.1| 679|Caenorhabditis elegans Kinesin-associated
protein protein1, isoform b protein.
Length = 679
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 204 VSGLTDEPLLDELLRILAEAQEELAVCFQLVDGVHSLVDLGVEALDLLLV 353
+SG E LL I E + VC Q G+ L+++ + + DL+L+
Sbjct: 379 LSGTGSEVTKAVLLNICLEKRNAQLVCGQRGQGLDLLMEMSINSRDLMLI 428
>U28991-1|AAM22059.1| 696|Caenorhabditis elegans Kinesin-associated
protein protein1, isoform a protein.
Length = 696
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 204 VSGLTDEPLLDELLRILAEAQEELAVCFQLVDGVHSLVDLGVEALDLLLV 353
+SG E LL I E + VC Q G+ L+++ + + DL+L+
Sbjct: 396 LSGTGSEVTKAVLLNICLEKRNAQLVCGQRGQGLDLLMEMSINSRDLMLI 445
>AF149287-1|AAF99086.1| 696|Caenorhabditis elegans KAP protein.
Length = 696
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 204 VSGLTDEPLLDELLRILAEAQEELAVCFQLVDGVHSLVDLGVEALDLLLV 353
+SG E LL I E + VC Q G+ L+++ + + DL+L+
Sbjct: 396 LSGTGSEVTKAVLLNICLEKRNAQLVCGQRGQGLDLLMEMSINSRDLMLI 445
>AB017107-1|BAA88838.1| 679|Caenorhabditis elegans Kinesin
associated protein kap-1 protein.
Length = 679
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 204 VSGLTDEPLLDELLRILAEAQEELAVCFQLVDGVHSLVDLGVEALDLLLV 353
+SG E LL I E + VC Q G+ L+++ + + DL+L+
Sbjct: 379 LSGTGSEVTKAVLLNICLEKRNAQLVCGQRGQGLDLLMEMSINSRDLMLI 428
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,916,554
Number of Sequences: 27780
Number of extensions: 193238
Number of successful extensions: 598
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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