Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_P18
(857 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC103660-1|AAI03661.1| 544|Homo sapiens RBM15 protein protein. 106 1e-22
BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein. 106 1e-22
BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein. 106 1e-22
BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein. 106 1e-22
BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein. 106 1e-22
BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein. 106 1e-22
BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein. 106 1e-22
AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif prote... 106 1e-22
AK025596-1|BAB15185.1| 532|Homo sapiens protein ( Homo sapiens ... 106 1e-22
AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens ... 106 1e-22
AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein. 106 1e-22
AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein. 106 1e-22
AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein ... 106 1e-22
AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein ... 106 1e-22
AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding mo... 106 1e-22
AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding mo... 106 1e-22
AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding mo... 106 1e-22
AB209680-1|BAD92917.1| 316|Homo sapiens RNA binding motif prote... 106 1e-22
BC139836-1|AAI39837.1| 563|Homo sapiens RBM15B protein protein. 97 5e-20
BC121184-1|AAI21185.1| 211|Homo sapiens RBM15B protein protein. 97 5e-20
BC001367-1|AAH01367.2| 418|Homo sapiens RBM15B protein protein. 97 5e-20
AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated... 59 2e-08
AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein pr... 59 2e-08
AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated ... 59 2e-08
AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transc... 59 2e-08
AB023146-1|BAA76773.1| 1663|Homo sapiens KIAA0929 protein protein. 59 2e-08
L13434-1|AAA72367.1| 256|Homo sapiens protein ( Human chromosom... 56 2e-07
AF364035-1|AAK56920.1| 99|Homo sapiens RNA-binding motif prote... 46 2e-04
AY545557-1|AAS50153.1| 151|Homo sapiens hypothetical protein pr... 32 3.1
>BC103660-1|AAI03661.1| 544|Homo sapiens RBM15 protein protein.
Length = 544
Score = 106 bits (254), Expect = 1e-22
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Frame = -2
Query: 721 QLXITXRLRLDQPKLDDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRP 566
QL IT RLRLDQPKLD+V +RI A + +AI + V GS+ + ++ + RP
Sbjct: 403 QLKITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRP 462
Query: 565 MRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNLTEESFKE 395
+RNLVSYLKQK+AAGVISL NK+ E TGVL++FPPCEFS L L + +E
Sbjct: 463 LRNLVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKS--EE 520
Query: 394 DHLVIVVV 371
D+LV+++V
Sbjct: 521 DYLVMIIV 528
>BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 106 bits (254), Expect = 1e-22
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Frame = -2
Query: 721 QLXITXRLRLDQPKLDDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRP 566
QL IT RLRLDQPKLD+V +RI A + +AI + V GS+ + ++ + RP
Sbjct: 828 QLKITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRP 887
Query: 565 MRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNLTEESFKE 395
+RNLVSYLKQK+AAGVISL NK+ E TGVL++FPPCEFS L L + +E
Sbjct: 888 LRNLVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKS--EE 945
Query: 394 DHLVIVVV 371
D+LV+++V
Sbjct: 946 DYLVMIIV 953
>BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 106 bits (254), Expect = 1e-22
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Frame = -2
Query: 721 QLXITXRLRLDQPKLDDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRP 566
QL IT RLRLDQPKLD+V +RI A + +AI + V GS+ + ++ + RP
Sbjct: 828 QLKITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRP 887
Query: 565 MRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNLTEESFKE 395
+RNLVSYLKQK+AAGVISL NK+ E TGVL++FPPCEFS L L + +E
Sbjct: 888 LRNLVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKS--EE 945
Query: 394 DHLVIVVV 371
D+LV+++V
Sbjct: 946 DYLVMIIV 953
>BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 106 bits (254), Expect = 1e-22
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Frame = -2
Query: 721 QLXITXRLRLDQPKLDDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRP 566
QL IT RLRLDQPKLD+V +RI A + +AI + V GS+ + ++ + RP
Sbjct: 828 QLKITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRP 887
Query: 565 MRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNLTEESFKE 395
+RNLVSYLKQK+AAGVISL NK+ E TGVL++FPPCEFS L L + +E
Sbjct: 888 LRNLVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKS--EE 945
Query: 394 DHLVIVVV 371
D+LV+++V
Sbjct: 946 DYLVMIIV 953
>BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein.
Length = 957
Score = 106 bits (254), Expect = 1e-22
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Frame = -2
Query: 721 QLXITXRLRLDQPKLDDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRP 566
QL IT RLRLDQPKLD+V +RI A + +AI + V GS+ + ++ + RP
Sbjct: 808 QLKITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRP 867
Query: 565 MRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNLTEESFKE 395
+RNLVSYLKQK+AAGVISL NK+ E TGVL++FPPCEFS L L + +E
Sbjct: 868 LRNLVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKS--EE 925
Query: 394 DHLVIVVV 371
D+LV+++V
Sbjct: 926 DYLVMIIV 933
>BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein.
Length = 959
Score = 106 bits (254), Expect = 1e-22
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Frame = -2
Query: 721 QLXITXRLRLDQPKLDDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRP 566
QL IT RLRLDQPKLD+V +RI A + +AI + V GS+ + ++ + RP
Sbjct: 818 QLKITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRP 877
Query: 565 MRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNLTEESFKE 395
+RNLVSYLKQK+AAGVISL NK+ E TGVL++FPPCEFS L L + +E
Sbjct: 878 LRNLVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKS--EE 935
Query: 394 DHLVIVVV 371
D+LV+++V
Sbjct: 936 DYLVMIIV 943
>BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein.
Length = 957
Score = 106 bits (254), Expect = 1e-22
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Frame = -2
Query: 721 QLXITXRLRLDQPKLDDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRP 566
QL IT RLRLDQPKLD+V +RI A + +AI + V GS+ + ++ + RP
Sbjct: 808 QLKITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRP 867
Query: 565 MRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNLTEESFKE 395
+RNLVSYLKQK+AAGVISL NK+ E TGVL++FPPCEFS L L + +E
Sbjct: 868 LRNLVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKS--EE 925
Query: 394 DHLVIVVV 371
D+LV+++V
Sbjct: 926 DYLVMIIV 933
>AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif protein 15
protein.
Length = 977
Score = 106 bits (254), Expect = 1e-22
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Frame = -2
Query: 721 QLXITXRLRLDQPKLDDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRP 566
QL IT RLRLDQPKLD+V +RI A + +AI + V GS+ + ++ + RP
Sbjct: 828 QLKITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRP 887
Query: 565 MRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNLTEESFKE 395
+RNLVSYLKQK+AAGVISL NK+ E TGVL++FPPCEFS L L + +E
Sbjct: 888 LRNLVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKS--EE 945
Query: 394 DHLVIVVV 371
D+LV+++V
Sbjct: 946 DYLVMIIV 953
>AK025596-1|BAB15185.1| 532|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21943 fis, clone HEP04547. ).
Length = 532
Score = 106 bits (254), Expect = 1e-22
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Frame = -2
Query: 721 QLXITXRLRLDQPKLDDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRP 566
QL IT RLRLDQPKLD+V +RI A + +AI + V GS+ + ++ + RP
Sbjct: 403 QLKITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRP 462
Query: 565 MRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNLTEESFKE 395
+RNLVSYLKQK+AAGVISL NK+ E TGVL++FPPCEFS L L + +E
Sbjct: 463 LRNLVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKS--EE 520
Query: 394 DHLVIVVV 371
D+LV+++V
Sbjct: 521 DYLVMIIV 528
>AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens cDNA
FLJ12479 fis, clone NT2RM1001059, weakly similar to
NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN NAB4. ).
Length = 925
Score = 106 bits (254), Expect = 1e-22
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Frame = -2
Query: 721 QLXITXRLRLDQPKLDDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRP 566
QL IT RLRLDQPKLD+V +RI A + +AI + V GS+ + ++ + RP
Sbjct: 784 QLKITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRP 843
Query: 565 MRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNLTEESFKE 395
+RNLVSYLKQK+AAGVISL NK+ E TGVL++FPPCEFS L L + +E
Sbjct: 844 LRNLVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKS--EE 901
Query: 394 DHLVIVVV 371
D+LV+++V
Sbjct: 902 DYLVMIIV 909
>AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein.
Length = 1883
Score = 106 bits (254), Expect = 1e-22
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Frame = -2
Query: 721 QLXITXRLRLDQPKLDDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRP 566
QL IT RLRLDQPKLD+V +RI A + +AI + V GS+ + ++ + RP
Sbjct: 828 QLKITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRP 887
Query: 565 MRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNLTEESFKE 395
+RNLVSYLKQK+AAGVISL NK+ E TGVL++FPPCEFS L L + +E
Sbjct: 888 LRNLVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKS--EE 945
Query: 394 DHLVIVVV 371
D+LV+++V
Sbjct: 946 DYLVMIIV 953
>AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein.
Length = 1905
Score = 106 bits (254), Expect = 1e-22
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Frame = -2
Query: 721 QLXITXRLRLDQPKLDDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRP 566
QL IT RLRLDQPKLD+V +RI A + +AI + V GS+ + ++ + RP
Sbjct: 828 QLKITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRP 887
Query: 565 MRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNLTEESFKE 395
+RNLVSYLKQK+AAGVISL NK+ E TGVL++FPPCEFS L L + +E
Sbjct: 888 LRNLVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKS--EE 945
Query: 394 DHLVIVVV 371
D+LV+++V
Sbjct: 946 DYLVMIIV 953
>AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein
protein.
Length = 969
Score = 106 bits (254), Expect = 1e-22
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Frame = -2
Query: 721 QLXITXRLRLDQPKLDDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRP 566
QL IT RLRLDQPKLD+V +RI A + +AI + V GS+ + ++ + RP
Sbjct: 828 QLKITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRP 887
Query: 565 MRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNLTEESFKE 395
+RNLVSYLKQK+AAGVISL NK+ E TGVL++FPPCEFS L L + +E
Sbjct: 888 LRNLVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKS--EE 945
Query: 394 DHLVIVVV 371
D+LV+++V
Sbjct: 946 DYLVMIIV 953
>AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein
protein.
Length = 957
Score = 106 bits (254), Expect = 1e-22
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Frame = -2
Query: 721 QLXITXRLRLDQPKLDDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRP 566
QL IT RLRLDQPKLD+V +RI A + +AI + V GS+ + ++ + RP
Sbjct: 828 QLKITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRP 887
Query: 565 MRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNLTEESFKE 395
+RNLVSYLKQK+AAGVISL NK+ E TGVL++FPPCEFS L L + +E
Sbjct: 888 LRNLVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKS--EE 945
Query: 394 DHLVIVVV 371
D+LV+++V
Sbjct: 946 DYLVMIIV 953
>AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding motif
protein 15 long form protein.
Length = 957
Score = 106 bits (254), Expect = 1e-22
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Frame = -2
Query: 721 QLXITXRLRLDQPKLDDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRP 566
QL IT RLRLDQPKLD+V +RI A + +AI + V GS+ + ++ + RP
Sbjct: 828 QLKITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRP 887
Query: 565 MRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNLTEESFKE 395
+RNLVSYLKQK+AAGVISL NK+ E TGVL++FPPCEFS L L + +E
Sbjct: 888 LRNLVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKS--EE 945
Query: 394 DHLVIVVV 371
D+LV+++V
Sbjct: 946 DYLVMIIV 953
>AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding motif
protein 15 short form plus alternative exon protein.
Length = 977
Score = 106 bits (254), Expect = 1e-22
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Frame = -2
Query: 721 QLXITXRLRLDQPKLDDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRP 566
QL IT RLRLDQPKLD+V +RI A + +AI + V GS+ + ++ + RP
Sbjct: 828 QLKITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRP 887
Query: 565 MRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNLTEESFKE 395
+RNLVSYLKQK+AAGVISL NK+ E TGVL++FPPCEFS L L + +E
Sbjct: 888 LRNLVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKS--EE 945
Query: 394 DHLVIVVV 371
D+LV+++V
Sbjct: 946 DYLVMIIV 953
>AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding motif
protein 15 short form protein.
Length = 969
Score = 106 bits (254), Expect = 1e-22
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Frame = -2
Query: 721 QLXITXRLRLDQPKLDDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRP 566
QL IT RLRLDQPKLD+V +RI A + +AI + V GS+ + ++ + RP
Sbjct: 828 QLKITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRP 887
Query: 565 MRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNLTEESFKE 395
+RNLVSYLKQK+AAGVISL NK+ E TGVL++FPPCEFS L L + +E
Sbjct: 888 LRNLVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKS--EE 945
Query: 394 DHLVIVVV 371
D+LV+++V
Sbjct: 946 DYLVMIIV 953
>AB209680-1|BAD92917.1| 316|Homo sapiens RNA binding motif protein
15 variant protein.
Length = 316
Score = 106 bits (254), Expect = 1e-22
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Frame = -2
Query: 721 QLXITXRLRLDQPKLDDVQKRI--ATSSSHAIFVGVSGST------AVVTNEDVSIQTRP 566
QL IT RLRLDQPKLD+V +RI A + +AI + V GS+ + ++ + RP
Sbjct: 187 QLKITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRP 246
Query: 565 MRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNLTEESFKE 395
+RNLVSYLKQK+AAGVISL NK+ E TGVL++FPPCEFS L L + +E
Sbjct: 247 LRNLVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKS--EE 304
Query: 394 DHLVIVVV 371
D+LV+++V
Sbjct: 305 DYLVMIIV 312
>BC139836-1|AAI39837.1| 563|Homo sapiens RBM15B protein protein.
Length = 563
Score = 97.5 bits (232), Expect = 5e-20
Identities = 58/135 (42%), Positives = 81/135 (60%), Gaps = 10/135 (7%)
Frame = -2
Query: 745 HEXXDGRNQLXITXRLRLDQPKLDDVQKRIATSS--SHAIFVGVSGSTAVVTNEDV---- 584
H QL I RLRLDQPKLD+V +RI S +A+ + + + + E +
Sbjct: 427 HTSGSKLTQLKIAQRLRLDQPKLDEVTRRIKQGSPNGYAVLLATQATPSGLGTEGMPTVE 486
Query: 583 -SIQTRPMRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNL 416
+Q R +RNLVSYLKQK+AAGVISL +K + TG+LY+FPPC+FS L+ L
Sbjct: 487 PGLQRRLLRNLVSYLKQKQAAGVISLPVGGSKGRDGTGMLYAFPPCDFSQQYLQSALRTL 546
Query: 415 TEESFKEDHLVIVVV 371
+ +E+H+VIV+V
Sbjct: 547 GK--LEEEHMVIVIV 559
>BC121184-1|AAI21185.1| 211|Homo sapiens RBM15B protein protein.
Length = 211
Score = 97.5 bits (232), Expect = 5e-20
Identities = 58/135 (42%), Positives = 81/135 (60%), Gaps = 10/135 (7%)
Frame = -2
Query: 745 HEXXDGRNQLXITXRLRLDQPKLDDVQKRIATSS--SHAIFVGVSGSTAVVTNEDV---- 584
H QL I RLRLDQPKLD+V +RI S +A+ + + + + E +
Sbjct: 75 HTSGSKLTQLKIAQRLRLDQPKLDEVTRRIKQGSPNGYAVLLATQATPSGLGTEGMPTVE 134
Query: 583 -SIQTRPMRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNL 416
+Q R +RNLVSYLKQK+AAGVISL +K + TG+LY+FPPC+FS L+ L
Sbjct: 135 PGLQRRLLRNLVSYLKQKQAAGVISLPVGGSKGRDGTGMLYAFPPCDFSQQYLQSALRTL 194
Query: 415 TEESFKEDHLVIVVV 371
+ +E+H+VIV+V
Sbjct: 195 GK--LEEEHMVIVIV 207
>BC001367-1|AAH01367.2| 418|Homo sapiens RBM15B protein protein.
Length = 418
Score = 97.5 bits (232), Expect = 5e-20
Identities = 58/135 (42%), Positives = 81/135 (60%), Gaps = 10/135 (7%)
Frame = -2
Query: 745 HEXXDGRNQLXITXRLRLDQPKLDDVQKRIATSS--SHAIFVGVSGSTAVVTNEDV---- 584
H QL I RLRLDQPKLD+V +RI S +A+ + + + + E +
Sbjct: 282 HTSGSKLTQLKIAQRLRLDQPKLDEVTRRIKQGSPNGYAVLLATQATPSGLGTEGMPTVE 341
Query: 583 -SIQTRPMRNLVSYLKQKEAAGVISLL---NKETEATGVLYSFPPCEFSTDLLKRTCHNL 416
+Q R +RNLVSYLKQK+AAGVISL +K + TG+LY+FPPC+FS L+ L
Sbjct: 342 PGLQRRLLRNLVSYLKQKQAAGVISLPVGGSKGRDGTGMLYAFPPCDFSQQYLQSALRTL 401
Query: 415 TEESFKEDHLVIVVV 371
+ +E+H+VIV+V
Sbjct: 402 GK--LEEEHMVIVIV 414
>AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 59.3 bits (137), Expect = 2e-08
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Frame = -2
Query: 733 DGRNQLXITXRLRLDQPKLDDVQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMRN- 557
+G L I R+RL+ +L+ V +R+ + + + + + EDV QT ++
Sbjct: 3542 EGGPPLRIAQRMRLEATQLEGVARRMTVETDYCLLLALPCGR---DQEDVVSQTESLKAA 3598
Query: 556 LVSYLKQKEAAGVISLLNK-ETEATGVLYSFPPCEFSTDLLKRTCHNLTEE-SFKEDHLV 383
++YL+ K+AAG+I++ N + VL FPPCEFS L R +L S HL+
Sbjct: 3599 FITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSESHLSRLAPDLLASISNISPHLM 3658
Query: 382 IVV 374
IV+
Sbjct: 3659 IVI 3661
>AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein
protein.
Length = 3261
Score = 59.3 bits (137), Expect = 2e-08
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Frame = -2
Query: 733 DGRNQLXITXRLRLDQPKLDDVQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMRN- 557
+G L I R+RL+ +L+ V +R+ + + + + + EDV QT ++
Sbjct: 3139 EGGPPLRIAQRMRLEATQLEGVARRMTVETDYCLLLALPCGR---DQEDVVSQTESLKAA 3195
Query: 556 LVSYLKQKEAAGVISLLNK-ETEATGVLYSFPPCEFSTDLLKRTCHNLTEE-SFKEDHLV 383
++YL+ K+AAG+I++ N + VL FPPCEFS L R +L S HL+
Sbjct: 3196 FITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSESHLSRLAPDLLASISNISPHLM 3255
Query: 382 IVV 374
IV+
Sbjct: 3256 IVI 3258
>AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 59.3 bits (137), Expect = 2e-08
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Frame = -2
Query: 733 DGRNQLXITXRLRLDQPKLDDVQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMRN- 557
+G L I R+RL+ +L+ V +R+ + + + + + EDV QT ++
Sbjct: 3542 EGGPPLRIAQRMRLEATQLEGVARRMTVETDYCLLLALPCGR---DQEDVVSQTESLKAA 3598
Query: 556 LVSYLKQKEAAGVISLLNK-ETEATGVLYSFPPCEFSTDLLKRTCHNLTEE-SFKEDHLV 383
++YL+ K+AAG+I++ N + VL FPPCEFS L R +L S HL+
Sbjct: 3599 FITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSESHLSRLAPDLLASISNISPHLM 3658
Query: 382 IVV 374
IV+
Sbjct: 3659 IVI 3661
>AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor
transcription cofactor protein.
Length = 3664
Score = 59.3 bits (137), Expect = 2e-08
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Frame = -2
Query: 733 DGRNQLXITXRLRLDQPKLDDVQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMRN- 557
+G L I R+RL+ +L+ V +R+ + + + + + EDV QT ++
Sbjct: 3542 EGGPPLRIAQRMRLEATQLEGVARRMTVETDYCLLLALPCGR---DQEDVVSQTESLKAA 3598
Query: 556 LVSYLKQKEAAGVISLLNK-ETEATGVLYSFPPCEFSTDLLKRTCHNLTEE-SFKEDHLV 383
++YL+ K+AAG+I++ N + VL FPPCEFS L R +L S HL+
Sbjct: 3599 FITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSESHLSRLAPDLLASISNISPHLM 3658
Query: 382 IVV 374
IV+
Sbjct: 3659 IVI 3661
>AB023146-1|BAA76773.1| 1663|Homo sapiens KIAA0929 protein protein.
Length = 1663
Score = 59.3 bits (137), Expect = 2e-08
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Frame = -2
Query: 733 DGRNQLXITXRLRLDQPKLDDVQKRIATSSSHAIFVGVSGSTAVVTNEDVSIQTRPMRN- 557
+G L I R+RL+ +L+ V +R+ + + + + + EDV QT ++
Sbjct: 1541 EGGPPLRIAQRMRLEATQLEGVARRMTVETDYCLLLALPCGR---DQEDVVSQTESLKAA 1597
Query: 556 LVSYLKQKEAAGVISLLNK-ETEATGVLYSFPPCEFSTDLLKRTCHNLTEE-SFKEDHLV 383
++YL+ K+AAG+I++ N + VL FPPCEFS L R +L S HL+
Sbjct: 1598 FITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSESHLSRLAPDLLASISNISPHLM 1657
Query: 382 IVV 374
IV+
Sbjct: 1658 IVI 1660
>L13434-1|AAA72367.1| 256|Homo sapiens protein ( Human chromosome
3p21.1 gene sequence, complete cds. ).
Length = 256
Score = 56.0 bits (129), Expect = 2e-07
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Frame = -2
Query: 745 HEXXDGRNQLXITXRLRLDQPKLDDVQKRIATSS--SHAIFVGVSGSTAVVTNE-----D 587
H QL I RLRLDQPKLD+ +RI S +A+ + + + + E +
Sbjct: 175 HTSGSKLTQLKIAQRLRLDQPKLDEDTRRIKQGSPNGYAVLLATQATPSGLGTEGMPTVE 234
Query: 586 VSIQTRPMRNLVSYLKQKEAAG 521
+Q R +RNLVSYLKQK+AAG
Sbjct: 235 PGLQRRLLRNLVSYLKQKQAAG 256
>AF364035-1|AAK56920.1| 99|Homo sapiens RNA-binding motif protein
15/megakaryoblastic leukemia-1 fusion protein protein.
Length = 99
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = -2
Query: 505 NKETEATGVLYSFPPCEFSTDLLKRTCHNLTEESFKEDHLVIVVV 371
NK+ E TGVL++FPPCEFS L L + +ED+LV+++V
Sbjct: 6 NKDKENTGVLHAFPPCEFSQQFLDSPAKALAKS--EEDYLVMIIV 48
>AY545557-1|AAS50153.1| 151|Homo sapiens hypothetical protein
protein.
Length = 151
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -2
Query: 745 HEXXDGRNQLXITXRLRLDQPKLDDV 668
H QL I RLRLDQPKLD+V
Sbjct: 122 HTSGSKLTQLKIAQRLRLDQPKLDEV 147
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,925,504
Number of Sequences: 237096
Number of extensions: 1717603
Number of successful extensions: 2649
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2597
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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