Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_P18
         (857 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    26   0.51 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    26   0.51 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    26   0.51 
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   1.6  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    23   2.7  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.8 bits (54), Expect = 0.51
 Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = -1

Query: 335 LVYCIVICRYILSI*VFCSTLFTLYSCDV---CDVRCIRCASLNICAV 201
           L   I++  + ++  +    +F ++ C +   CDV C   + LN+CA+
Sbjct: 83  LAVAILVMPFNVAYLLLGKWIFGIHLCKLWLTCDVLCCTASILNLCAI 130


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.8 bits (54), Expect = 0.51
 Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = -1

Query: 335 LVYCIVICRYILSI*VFCSTLFTLYSCDV---CDVRCIRCASLNICAV 201
           L   I++  + ++  +    +F ++ C +   CDV C   + LN+CA+
Sbjct: 83  LAVAILVMPFNVAYLLLGKWIFGIHLCKLWLTCDVLCCTASILNLCAI 130


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 25.8 bits (54), Expect = 0.51
 Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = -1

Query: 335 LVYCIVICRYILSI*VFCSTLFTLYSCDV---CDVRCIRCASLNICAV 201
           L   I++  + ++  +    +F ++ C +   CDV C   + LN+CA+
Sbjct: 83  LAVAILVMPFNVAYLLLGKWIFGIHLCKLWLTCDVLCCTASILNLCAI 130


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 604  VVTNEDVSIQTRPMRNLVSYLKQKEAA 524
            VVTN+  SIQT  M+ +++ +  K  A
Sbjct: 1069 VVTNQQQSIQTSGMQRIIAQIGGKPIA 1095


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 328 IVLLFVGIYSQFKFFVLHFLLYILVM 251
           IVL F G++S F F +L    YI+++
Sbjct: 58  IVLAFSGLFSVFSFLIL-VSSYIVIL 82


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,372
Number of Sequences: 438
Number of extensions: 3576
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)