Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_P14
         (810 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7PI90 Cluster: Chromosome chr13 scaffold_17, whole gen...    42   0.024
UniRef50_A2DTE8 Cluster: Clan CA, family C2, calpain-like cystei...    34   4.9  

>UniRef50_A7PI90 Cluster: Chromosome chr13 scaffold_17, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr13 scaffold_17, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 43

 Score = 41.5 bits (93), Expect = 0.024
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -3

Query: 559 FIYLSCWWNVVLLYFSLMYIVMSYVIYIC 473
           F++L+ WWN + L+F    I MSYV+Y+C
Sbjct: 3   FLHLTIWWNYINLHFDTKTIAMSYVLYLC 31


>UniRef50_A2DTE8 Cluster: Clan CA, family C2, calpain-like cysteine
           peptidase; n=1; Trichomonas vaginalis G3|Rep: Clan CA,
           family C2, calpain-like cysteine peptidase - Trichomonas
           vaginalis G3
          Length = 1437

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 24/88 (27%), Positives = 41/88 (46%)
 Frame = -1

Query: 327 GSVTEALIALFIILNCHGHLRNIGINRFVYFTP**FICNVRSFCIEQETNCYFPLFITKS 148
           G V    I  F+ + C G+ + I I  ++ F    F+ ++ +   +++ N YF  FIT  
Sbjct: 520 GVVLLLTILYFVFIFCFGNTKFISIAVYLIFI---FLFSIYNLATQEDNNYYFKTFITLI 576

Query: 147 VVSLKNVILLTSLAV*QFCNGNYAYRLV 64
           V    + I L  +A   F   N+ Y L+
Sbjct: 577 VFLFVSCIALVVIA---FVYFNWKYVLI 601


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,430,832
Number of Sequences: 1657284
Number of extensions: 13068687
Number of successful extensions: 25781
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25755
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69966202150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)