Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_P14
         (810 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    25   0.54 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    25   0.54 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.9  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   5.0  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   5.0  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.8  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.8  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.8  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 9/26 (34%), Positives = 20/26 (76%), Gaps = 2/26 (7%)
 Frame = +3

Query: 453 ILCAMYVHM--YITYDITIYIKLKYN 524
           + C +YV +  ++TY++++ IKL+Y+
Sbjct: 173 LFCVLYVVLLHFLTYNLSLGIKLRYD 198


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 9/26 (34%), Positives = 20/26 (76%), Gaps = 2/26 (7%)
 Frame = +3

Query: 453 ILCAMYVHM--YITYDITIYIKLKYN 524
           + C +YV +  ++TY++++ IKL+Y+
Sbjct: 173 LFCVLYVVLLHFLTYNLSLGIKLRYD 198


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 565 YKRQHNSVKTHTNRKKVGILDSRIGDWKLKTRSV 666
           YK Q    K H   K V ++  +I DW  K +S+
Sbjct: 769 YKTQKTGSKIHLFVKCVFLMGYQIFDWVQKEQSL 802


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = -2

Query: 452 LILTVVDDVYIRNRNYLHGYGTVAVSY---LSKVSE 354
           LI  VVD + +   N LH + T AVS+   L KV E
Sbjct: 234 LIRKVVDGMAMAKLNVLHLHLTDAVSFPIVLPKVQE 269


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 399 WLWHGGRIIPIKGVRIAQTKSFSYGSVTEA 310
           +L+H GR+  ++G R+      S  S +EA
Sbjct: 12  YLYHDGRVKLLEGRRVVDCDDVSSVSQSEA 41


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = -3

Query: 541 WWNVVLLYFSLMYIVMSYVIYICTY 467
           W ++ +LY  + Y+V + ++ +  Y
Sbjct: 83  WTSIPMLYAYVFYVVTTVLVVLVGY 107


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = -3

Query: 541 WWNVVLLYFSLMYIVMSYVIYICTY 467
           W ++ +LY  + Y+V + ++ +  Y
Sbjct: 83  WTSIPMLYAYVFYVVTTVLVVLVGY 107


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = -3

Query: 541 WWNVVLLYFSLMYIVMSYVIYICTY 467
           W ++ +LY  + Y+V + ++ +  Y
Sbjct: 83  WTSIPMLYAYVFYVVTTVLVVLVGY 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,131
Number of Sequences: 336
Number of extensions: 3947
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)