Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_P10
(854 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 241 5e-64
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 241 5e-64
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 241 5e-64
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 240 1e-63
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 240 1e-63
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 240 1e-63
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 240 1e-63
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 240 1e-63
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 234 6e-62
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 230 9e-61
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 222 3e-58
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 212 4e-55
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 203 2e-52
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 196 2e-50
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 144 1e-34
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 99 2e-21
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 77 1e-14
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 77 1e-14
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 73 2e-13
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 63 2e-10
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 52 5e-07
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 52 5e-07
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 52 8e-07
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 43 4e-04
SB_37750| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 241 bits (590), Expect = 5e-64
Identities = 113/142 (79%), Positives = 115/142 (80%)
Frame = -3
Query: 612 PPTRW*NAXPRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXY 433
P + PRHGKYMACCMLYRGDVVPKDV ATIKTKRTI VDWCPTGFKVGI Y
Sbjct: 235 PANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 294
Query: 432 QPPXVVPGGXLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEGMEEGE 253
QPP VVPGG LAKVQ A CMLS TTA AE W LDHKFDLMYAK FVHW VGEGMEEGE
Sbjct: 295 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 354
Query: 252 FSEAREXLAALEKDYEEVGMDS 187
FSEARE LAALEKDYEEVG+DS
Sbjct: 355 FSEAREDLAALEKDYEEVGVDS 376
Score = 71.7 bits (168), Expect = 7e-13
Identities = 33/45 (73%), Positives = 33/45 (73%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITNACFEPANQMVKCXP 584
PRI FP PVI AE AYHEQ S A ITNACFEPANQMVKC P
Sbjct: 200 PRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 244
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 241 bits (590), Expect = 5e-64
Identities = 113/142 (79%), Positives = 115/142 (80%)
Frame = -3
Query: 612 PPTRW*NAXPRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXY 433
P + PRHGKYMACCMLYRGDVVPKDV ATIKTKRTI VDWCPTGFKVGI Y
Sbjct: 223 PANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 282
Query: 432 QPPXVVPGGXLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEGMEEGE 253
QPP VVPGG LAKVQ A CMLS TTA AE W LDHKFDLMYAK FVHW VGEGMEEGE
Sbjct: 283 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 342
Query: 252 FSEAREXLAALEKDYEEVGMDS 187
FSEARE LAALEKDYEEVG+DS
Sbjct: 343 FSEAREDLAALEKDYEEVGVDS 364
Score = 71.7 bits (168), Expect = 7e-13
Identities = 33/45 (73%), Positives = 33/45 (73%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITNACFEPANQMVKCXP 584
PRI FP PVI AE AYHEQ S A ITNACFEPANQMVKC P
Sbjct: 188 PRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 232
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 241 bits (590), Expect = 5e-64
Identities = 113/142 (79%), Positives = 115/142 (80%)
Frame = -3
Query: 612 PPTRW*NAXPRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXY 433
P + PRHGKYMACCMLYRGDVVPKDV ATIKTKRTI VDWCPTGFKVGI Y
Sbjct: 96 PANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 155
Query: 432 QPPXVVPGGXLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEGMEEGE 253
QPP VVPGG LAKVQ A CMLS TTA AE W LDHKFDLMYAK FVHW VGEGMEEGE
Sbjct: 156 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 215
Query: 252 FSEAREXLAALEKDYEEVGMDS 187
FSEARE LAALEKDYEEVG+DS
Sbjct: 216 FSEAREDLAALEKDYEEVGVDS 237
Score = 71.7 bits (168), Expect = 7e-13
Identities = 33/45 (73%), Positives = 33/45 (73%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITNACFEPANQMVKCXP 584
PRI FP PVI AE AYHEQ S A ITNACFEPANQMVKC P
Sbjct: 61 PRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 105
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 240 bits (587), Expect = 1e-63
Identities = 112/142 (78%), Positives = 115/142 (80%)
Frame = -3
Query: 612 PPTRW*NAXPRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXY 433
P + PRHGKYMACC+LYRGDVVPKDV ATIKTKRTI VDWCPTGFKVGI Y
Sbjct: 298 PANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 357
Query: 432 QPPXVVPGGXLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEGMEEGE 253
QPP VVPGG LAKVQ A CMLS TTA AE W LDHKFDLMYAK FVHW VGEGMEEGE
Sbjct: 358 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 252 FSEAREXLAALEKDYEEVGMDS 187
FSEARE LAALEKDYEEVG+DS
Sbjct: 418 FSEAREDLAALEKDYEEVGVDS 439
Score = 70.5 bits (165), Expect = 2e-12
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITNACFEPANQMVKCXP 584
PRI FP PVI AE AYHEQ + A ITNACFEPANQMVKC P
Sbjct: 263 PRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDP 307
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 240 bits (587), Expect = 1e-63
Identities = 112/142 (78%), Positives = 115/142 (80%)
Frame = -3
Query: 612 PPTRW*NAXPRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXY 433
P + PRHGKYMACC+LYRGDVVPKDV ATIKTKRTI VDWCPTGFKVGI Y
Sbjct: 263 PANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 322
Query: 432 QPPXVVPGGXLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEGMEEGE 253
QPP VVPGG LAKVQ A CMLS TTA AE W LDHKFDLMYAK FVHW VGEGMEEGE
Sbjct: 323 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 382
Query: 252 FSEAREXLAALEKDYEEVGMDS 187
FSEARE LAALEKDYEEVG+DS
Sbjct: 383 FSEAREDLAALEKDYEEVGVDS 404
Score = 66.5 bits (155), Expect = 3e-11
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITNACFEPANQMVKCXP 584
PRI FP P+I AE AYHE + + +TNACFEPANQMVKC P
Sbjct: 228 PRIHFPMATYAPIISAEKAYHEMMTVSDLTNACFEPANQMVKCDP 272
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 240 bits (587), Expect = 1e-63
Identities = 112/142 (78%), Positives = 115/142 (80%)
Frame = -3
Query: 612 PPTRW*NAXPRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXY 433
P + PRHGKYMACC+LYRGDVVPKDV ATIKTKRTI VDWCPTGFKVGI Y
Sbjct: 731 PANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 790
Query: 432 QPPXVVPGGXLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEGMEEGE 253
QPP VVPGG LAKVQ A CMLS TTA AE W LDHKFDLMYAK FVHW VGEGMEEGE
Sbjct: 791 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 850
Query: 252 FSEAREXLAALEKDYEEVGMDS 187
FSEARE LAALEKDYEEVG+DS
Sbjct: 851 FSEAREDLAALEKDYEEVGVDS 872
Score = 233 bits (569), Expect = 2e-61
Identities = 109/137 (79%), Positives = 110/137 (80%)
Frame = -3
Query: 612 PPTRW*NAXPRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXY 433
P + PRHGKYMACCMLYRGDVVPKDV ATIKTKRTI VDWCPTGFKVGI Y
Sbjct: 298 PANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 357
Query: 432 QPPXVVPGGXLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEGMEEGE 253
QPP VVPGG LAKVQ A CMLS TTA AE W LDHKFDLMYAK FVHW VGEGMEEGE
Sbjct: 358 QPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 252 FSEAREXLAALEKDYEE 202
FSEARE LAALEKDYEE
Sbjct: 418 FSEAREDLAALEKDYEE 434
Score = 71.7 bits (168), Expect = 7e-13
Identities = 33/45 (73%), Positives = 33/45 (73%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITNACFEPANQMVKCXP 584
PRI FP PVI AE AYHEQ S A ITNACFEPANQMVKC P
Sbjct: 263 PRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 307
Score = 70.5 bits (165), Expect = 2e-12
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITNACFEPANQMVKCXP 584
PRI FP PVI AE AYHEQ + A ITNACFEPANQMVKC P
Sbjct: 696 PRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDP 740
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 240 bits (587), Expect = 1e-63
Identities = 112/142 (78%), Positives = 115/142 (80%)
Frame = -3
Query: 612 PPTRW*NAXPRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXY 433
P + PRHGKYMACC+LYRGDVVPKDV ATIKTKRTI VDWCPTGFKVGI Y
Sbjct: 883 PANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 942
Query: 432 QPPXVVPGGXLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEGMEEGE 253
QPP VVPGG LAKVQ A CMLS TTA AE W LDHKFDLMYAK FVHW VGEGMEEGE
Sbjct: 943 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 1002
Query: 252 FSEAREXLAALEKDYEEVGMDS 187
FSEARE LAALEKDYEEVG+DS
Sbjct: 1003 FSEAREDLAALEKDYEEVGVDS 1024
Score = 124 bits (299), Expect = 9e-29
Identities = 56/74 (75%), Positives = 58/74 (78%)
Frame = -3
Query: 612 PPTRW*NAXPRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXY 433
P + PRHGKYMACCMLYRGDVVPKDV ATIKTKRTI VDWCPTGFKVGI Y
Sbjct: 362 PANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 421
Query: 432 QPPXVVPGGXLAKV 391
QPP VVPGG LAK+
Sbjct: 422 QPPTVVPGGDLAKI 435
Score = 71.7 bits (168), Expect = 7e-13
Identities = 33/45 (73%), Positives = 33/45 (73%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITNACFEPANQMVKCXP 584
PRI FP PVI AE AYHEQ S A ITNACFEPANQMVKC P
Sbjct: 327 PRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 371
Score = 71.7 bits (168), Expect = 7e-13
Identities = 33/45 (73%), Positives = 33/45 (73%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITNACFEPANQMVKCXP 584
PRI FP PVI AE AYHEQ S A ITNACFEPANQMVKC P
Sbjct: 848 PRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 892
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 240 bits (587), Expect = 1e-63
Identities = 112/142 (78%), Positives = 115/142 (80%)
Frame = -3
Query: 612 PPTRW*NAXPRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXY 433
P + PRHGKYMACC+LYRGDVVPKDV ATIKTKRTI VDWCPTGFKVGI Y
Sbjct: 298 PANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSSIATIKTKRTIQFVDWCPTGFKVGINY 357
Query: 432 QPPXVVPGGXLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEGMEEGE 253
QPP VVPGG LAKVQ A CMLS TTA AE W LDHKFDLMYAK FVHW VGEGMEEGE
Sbjct: 358 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 252 FSEAREXLAALEKDYEEVGMDS 187
FSEARE LAALEKDYEEVG+DS
Sbjct: 418 FSEAREDLAALEKDYEEVGVDS 439
Score = 71.7 bits (168), Expect = 7e-13
Identities = 33/45 (73%), Positives = 33/45 (73%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITNACFEPANQMVKCXP 584
PRI FP PVI AE AYHEQ S A ITNACFEPANQMVKC P
Sbjct: 263 PRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 307
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 234 bits (573), Expect = 6e-62
Identities = 109/142 (76%), Positives = 114/142 (80%)
Frame = -3
Query: 612 PPTRW*NAXPRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXY 433
P + PRHGKYMACC+L+RGDVVPKDV ATIKTKRTI VDWCPTGFKVGI Y
Sbjct: 714 PANQMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 773
Query: 432 QPPXVVPGGXLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEGMEEGE 253
QPP VVPGG LAKVQ A CMLS TTA AE W LDHKFDLMYAK FVHW VGEGMEEGE
Sbjct: 774 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 833
Query: 252 FSEAREXLAALEKDYEEVGMDS 187
FSEARE LAALEKDYEEV ++S
Sbjct: 834 FSEAREDLAALEKDYEEVAVES 855
Score = 231 bits (565), Expect = 5e-61
Identities = 108/142 (76%), Positives = 111/142 (78%)
Frame = -3
Query: 627 THVLSPPTRW*NAXPRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFK 448
T P + PRHGKYMACC+L+RGDVVPKDV ATIKTKRTI VDWCPTGFK
Sbjct: 278 TSCFEPANQMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 337
Query: 447 VGIXYQPPXVVPGGXLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEG 268
VGI YQPP VVPGG LAKVQ A CMLS TTA AE W LDHKFDLMYAK FVHW VGEG
Sbjct: 338 VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 397
Query: 267 MEEGEFSEAREXLAALEKDYEE 202
MEEGEFSEARE LAALEKDYEE
Sbjct: 398 MEEGEFSEAREDLAALEKDYEE 419
Score = 66.9 bits (156), Expect = 2e-11
Identities = 30/45 (66%), Positives = 32/45 (71%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITNACFEPANQMVKCXP 584
PRI FP PVI AE AYHEQ + A IT +CFEPANQMVKC P
Sbjct: 248 PRIHFPLATYAPVISAEKAYHEQLTVAEITTSCFEPANQMVKCDP 292
Score = 66.5 bits (155), Expect = 3e-11
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITNACFEPANQMVKCXP 584
PRI FP P+I AE AYHE + + +TNACFEPANQMVKC P
Sbjct: 679 PRIHFPMATYAPIISAEKAYHEMMTVSDLTNACFEPANQMVKCDP 723
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 230 bits (563), Expect = 9e-61
Identities = 107/137 (78%), Positives = 110/137 (80%)
Frame = -3
Query: 612 PPTRW*NAXPRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXY 433
P + PRHGKYMACC+LYRGDVVPKDV ATIKTK+TI VDWCPTGFKVGI Y
Sbjct: 669 PANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKKTIQFVDWCPTGFKVGINY 728
Query: 432 QPPXVVPGGXLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEGMEEGE 253
QPP VVPGG LAKVQ A CMLS TTA AE W LDHKFDLMYAK FVHW VGEGMEEGE
Sbjct: 729 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 788
Query: 252 FSEAREXLAALEKDYEE 202
FSEARE LAALEKDYEE
Sbjct: 789 FSEAREDLAALEKDYEE 805
Score = 193 bits (471), Expect = 1e-49
Identities = 92/113 (81%), Positives = 93/113 (82%)
Frame = -3
Query: 525 DVXXXXATIKTKRTIXXVDWCPTGFKVGIXYQPPXVVPGGXLAKVQXAACMLSXTTAXAE 346
DV ATIKTKRTI VDWCPTGFKVGI YQPP VVPGG LAKVQ A CMLS TTA AE
Sbjct: 1107 DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 1166
Query: 345 XWXXLDHKFDLMYAKXXFVHWXVGEGMEEGEFSEAREXLAALEKDYEEVGMDS 187
W LDHKFDLMYAK FVHW VGEGMEEGEFSEARE LAALEKDYEEVG+DS
Sbjct: 1167 AWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 1219
Score = 69.3 bits (162), Expect = 4e-12
Identities = 30/45 (66%), Positives = 33/45 (73%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITNACFEPANQMVKCXP 584
PRI FP PV+ AE AYHEQ + A ITN+CFEPANQMVKC P
Sbjct: 634 PRIHFPMASYAPVVSAEKAYHEQLTVADITNSCFEPANQMVKCDP 678
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/40 (70%), Positives = 29/40 (72%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITNACFEPANQM 599
PRI FP PVI AE AYHEQ + A ITNACFEPANQM
Sbjct: 1067 PRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQM 1106
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 222 bits (543), Expect = 3e-58
Identities = 103/137 (75%), Positives = 108/137 (78%)
Frame = -3
Query: 612 PPTRW*NAXPRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXY 433
P + PRHGKYMACC+LYRGDVVPKDV ATIKTKRTI VDWCPTGFKVGI Y
Sbjct: 96 PANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 155
Query: 432 QPPXVVPGGXLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEGMEEGE 253
Q P VPGG LAKVQ + CMLS TTA A+ W L+HKFDLMYAK FVHW VGEGMEEGE
Sbjct: 156 QQPTAVPGGDLAKVQRSVCMLSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGE 215
Query: 252 FSEAREXLAALEKDYEE 202
FSEARE LAALEKDYEE
Sbjct: 216 FSEAREDLAALEKDYEE 232
Score = 70.9 bits (166), Expect = 1e-12
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITNACFEPANQMVKCXP 584
PRI FP PVI AE AYHEQ + A ITNACFEPANQMVKC P
Sbjct: 61 PRIHFPLATYAPVISAEKAYHEQLTVADITNACFEPANQMVKCDP 105
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 212 bits (517), Expect = 4e-55
Identities = 109/163 (66%), Positives = 112/163 (68%), Gaps = 21/163 (12%)
Frame = -3
Query: 612 PPTRW*NAXPRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFK----- 448
P + PR+GKYMACC+LYRGDVVPKDV A IK KRTI VDWCPTGFK
Sbjct: 429 PSNQMVKCDPRYGKYMACCLLYRGDVVPKDVNSAIAAIKMKRTIQFVDWCPTGFKCHPNI 488
Query: 447 ----------------VGIXYQPPXVVPGGXLAKVQXAACMLSXTTAXAEXWXXLDHKFD 316
VGI YQPP VVPGG LAKVQ A CMLS TTA AE W LDHKFD
Sbjct: 489 SDKQKKSTKTFYSGTQVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFD 548
Query: 315 LMYAKXXFVHWXVGEGMEEGEFSEAREXLAALEKDYEEVGMDS 187
LMYAK FVHW VGEGMEEGEFSEARE LAALEKDYEEVG DS
Sbjct: 549 LMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADS 591
Score = 64.9 bits (151), Expect = 8e-11
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITNACFEPANQMVKCXP 584
PRI FP PVI A+ AYHE S A IT+ACFEP+NQMVKC P
Sbjct: 394 PRIHFPLATYAPVIGADKAYHENMSVAEITSACFEPSNQMVKCDP 438
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 203 bits (495), Expect = 2e-52
Identities = 99/128 (77%), Positives = 102/128 (79%)
Frame = -3
Query: 570 YMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXYQPPXVVPGGXLAKV 391
++A C GDVV KDV ATIKTKRTI VDWCPTGFKVGI YQPP VVPGG LAKV
Sbjct: 297 WLAVCYS-EGDVVLKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV 355
Query: 390 QXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEGMEEGEFSEAREXLAALEKD 211
Q A CMLS TTA AE W LDHKFDLMYAK FVHW VGEGMEEGEFSEARE LAALEKD
Sbjct: 356 QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 415
Query: 210 YEEVGMDS 187
YEEVG+DS
Sbjct: 416 YEEVGVDS 423
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITN 626
PRI FP PVI AE AYHEQ + A ITN
Sbjct: 253 PRIHFPLATYAPVISAEKAYHEQLTVAEITN 283
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 196 bits (477), Expect = 2e-50
Identities = 97/142 (68%), Positives = 101/142 (71%)
Frame = -3
Query: 612 PPTRW*NAXPRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXY 433
P + PRHGKYMACC+LYRGDVVPKDV ATI+ KRT DWCPTGFKVGI
Sbjct: 223 PANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIRPKRTFQFGDWCPTGFKVGINS 282
Query: 432 QPPXVVPGGXLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEGMEEGE 253
QPP VVPGG LAK AE W LDHKFDLMYAK FVHW VGEGMEEGE
Sbjct: 283 QPPTVVPGGDLAK------------PIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 330
Query: 252 FSEAREXLAALEKDYEEVGMDS 187
FSEARE LAALEKDYEEVG+DS
Sbjct: 331 FSEAREDLAALEKDYEEVGVDS 352
Score = 69.3 bits (162), Expect = 4e-12
Identities = 31/45 (68%), Positives = 33/45 (73%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITNACFEPANQMVKCXP 584
PRI FP PVI AE AYHEQ + A ITN+CFEPANQMVKC P
Sbjct: 188 PRIHFPLATYAPVISAEKAYHEQLTVAEITNSCFEPANQMVKCDP 232
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 144 bits (348), Expect = 1e-34
Identities = 67/87 (77%), Positives = 71/87 (81%)
Frame = -3
Query: 447 VGIXYQPPXVVPGGXLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEG 268
VGI YQ P VPGG LAKVQ + CMLS TTA A+ W L+HKFDLMYAK FVHW VGEG
Sbjct: 51 VGINYQQPTAVPGGDLAKVQRSVCMLSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGEG 110
Query: 267 MEEGEFSEAREXLAALEKDYEEVGMDS 187
MEEGEFSEARE LAALEKDYEEVG+DS
Sbjct: 111 MEEGEFSEAREDLAALEKDYEEVGVDS 137
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 99 bits (238), Expect = 2e-21
Identities = 44/63 (69%), Positives = 48/63 (76%)
Frame = -3
Query: 612 PPTRW*NAXPRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXY 433
P + PRHGKYMACC+LYRGDVVPKDV ATIKTKRTI VDWCPTGFKVGI +
Sbjct: 297 PANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIRH 356
Query: 432 QPP 424
+ P
Sbjct: 357 KAP 359
Score = 70.9 bits (166), Expect = 1e-12
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITNACFEPANQMVKCXP 584
PRI FP PVI AE AYHEQ + A ITNACFEPANQMVKC P
Sbjct: 262 PRIHFPLATYAPVISAEKAYHEQLTVADITNACFEPANQMVKCDP 306
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 80.6 bits (190), Expect = 1e-15
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = -3
Query: 321 FDLMYAKXXFVHWXVGEGMEEGEFSEAREXLAALEKDYEEVGMDS 187
+D YAK FVHW VGEGMEEGEFSEARE LAALEKDYEEVG+DS
Sbjct: 9 YDHDYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 53
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/128 (28%), Positives = 64/128 (50%)
Frame = -3
Query: 585 PRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXYQPPXVVPGG 406
PRHG+Y+ ++RG + K+V ++ K + V+W P K + PP
Sbjct: 305 PRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR----- 359
Query: 405 XLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEGMEEGEFSEAREXLA 226
++ +A + +TA E + + +F M+ + F+HW GEGM+E EF+EA +
Sbjct: 360 ---GLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 416
Query: 225 ALEKDYEE 202
L +Y++
Sbjct: 417 DLVSEYQQ 424
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/128 (28%), Positives = 64/128 (50%)
Frame = -3
Query: 585 PRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXYQPPXVVPGG 406
PRHG+Y+ ++RG + K+V ++ K + V+W P K + PP
Sbjct: 305 PRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR----- 359
Query: 405 XLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEGMEEGEFSEAREXLA 226
++ +A + +TA E + + +F M+ + F+HW GEGM+E EF+EA +
Sbjct: 360 ---GLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 416
Query: 225 ALEKDYEE 202
L +Y++
Sbjct: 417 DLVSEYQQ 424
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/128 (26%), Positives = 63/128 (49%)
Frame = -3
Query: 585 PRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXYQPPXVVPGG 406
P HG+Y+ ++RG + K++ ++ K + V+W P K + PP
Sbjct: 250 PLHGRYLTVAAMFRGRMSMKELDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR----- 304
Query: 405 XLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEGMEEGEFSEAREXLA 226
++ +A + +TA E + + +F M+ + F+HW GEGM+E EF+EA +
Sbjct: 305 ---GLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 361
Query: 225 ALEKDYEE 202
L +Y++
Sbjct: 362 DLVSEYQQ 369
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 64.5 bits (150), Expect = 1e-10
Identities = 29/45 (64%), Positives = 31/45 (68%)
Frame = -2
Query: 718 PRIXFPXVXXXPVIFAEXAYHEQXSXAGITNACFEPANQMVKCXP 584
PRI FP V PVI E AYHEQ + A ITN CF+P NQMVKC P
Sbjct: 1174 PRIHFPLVTYAPVISPEKAYHEQLTVAQITNMCFDPNNQMVKCDP 1218
Score = 45.2 bits (102), Expect = 7e-05
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -3
Query: 585 PRHGKYMACCMLYRGDV 535
PRHGKYMACCMLYRGDV
Sbjct: 1218 PRHGKYMACCMLYRGDV 1234
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/128 (28%), Positives = 60/128 (46%)
Frame = -3
Query: 585 PRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXYQPPXVVPGG 406
P+ GKY+ +YRG + K+V A + + + VDW P KV + PP
Sbjct: 210 PKRGKYLTYAAMYRGLMSMKEVEDQMAFAQDRYSSLFVDWIPNNGKVAVCDVPPH----- 264
Query: 405 XLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFVHWXVGEGMEEGEFSEAREXLA 226
++ +A +S TA E + + + LM+ + F+HW EGM+ +F EA +
Sbjct: 265 ---DMKMSASCISSNTAIQELFKRIRLHYKLMFRRRAFLHWYTEEGMDSQQFEEADNDIL 321
Query: 225 ALEKDYEE 202
L Y++
Sbjct: 322 DLISTYQQ 329
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 52.4 bits (120), Expect = 5e-07
Identities = 28/99 (28%), Positives = 48/99 (48%)
Frame = -3
Query: 498 KTKRTIXXVDWCPTGFKVGIXYQPPXVVPGGXLAKVQXAACMLSXTTAXAEXWXXLDHKF 319
+ K + V+W P K + + P G ++ AA + TA E + + +F
Sbjct: 99 QNKNSPFFVEWIPNNVKTTVC----DIAPKG----LKMAATFVGNNTAIQELFKRVGEQF 150
Query: 318 DLMYAKXXFVHWXVGEGMEEGEFSEAREXLAALEKDYEE 202
M+ + F+HW GEGM+E EF+EA + L +Y++
Sbjct: 151 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQ 189
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 52.4 bits (120), Expect = 5e-07
Identities = 28/99 (28%), Positives = 48/99 (48%)
Frame = -3
Query: 498 KTKRTIXXVDWCPTGFKVGIXYQPPXVVPGGXLAKVQXAACMLSXTTAXAEXWXXLDHKF 319
+ K + V+W P K + + P G ++ AA + TA E + + +F
Sbjct: 161 QNKNSPFFVEWIPNNVKTTVC----DIAPKG----LKMAATFVGNNTAIQELFKRVGEQF 212
Query: 318 DLMYAKXXFVHWXVGEGMEEGEFSEAREXLAALEKDYEE 202
M+ + F+HW GEGM+E EF+EA + L +Y++
Sbjct: 213 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQ 251
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 51.6 bits (118), Expect = 8e-07
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Frame = -3
Query: 591 AXPRHGKYMACCMLYRGDVVPKDVXXXXATIKTKRTIXXVDWCPTGFKVGIXYQPPXVVP 412
A P+H Y+AC ++ RG+V D+ +K ++ + W G+K G+ PP P
Sbjct: 352 ADPKHNLYLACALILRGNVEVSDIRRNIERLKP--SLKFIHWNQEGWKTGLCSVPPVGQP 409
Query: 411 GGXLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXXFV-HWXVGEGMEEGEFSEARE 235
L L+ + + L +F +Y + V H+ +G+E G+F + E
Sbjct: 410 YSLLT--------LANNSCIKNTFVELKDRFMKLYKRKAHVHHYTHVDGLEVGQFDDGLE 461
Query: 234 XLAALEKDY 208
L+ L ++Y
Sbjct: 462 SLSWLIQEY 470
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 42.7 bits (96), Expect = 4e-04
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = -3
Query: 474 VDWCPTGFKVGIXYQPPXVVPGGXLAKVQXAACMLSXTTAXAEXWXXLDHKFDLMYAKXX 295
V+W P K + PP ++ AA L +TA E + +F M+ +
Sbjct: 161 VEWIPNNMKTAVCDVPP--------VGLKNAATFLYNSTAIQEAFRRFTEQFAAMFRRRA 212
Query: 294 FVHWXVGEGMEEGEFSEAR 238
F+HW EGM+ EF+E +
Sbjct: 213 FLHWYTTEGMDPLEFTEIK 231
>SB_37750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 759
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = -1
Query: 341 GXALTTSLTXCTPXVXLCTGXSVRVWRRESFPKPVRXWLPXRRITKKSAWTPLKARVREP 162
G L T T V LC G +W + +FP+ R S +T L+ + E
Sbjct: 110 GTLLLTIHIYLTTGVILCQGIGFYIWAKLAFPRLKEAVDNAIRSNDDSTFTELEKKKAEN 169
Query: 161 KSTKPM 144
K T M
Sbjct: 170 KPTNEM 175
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,045,753
Number of Sequences: 59808
Number of extensions: 294420
Number of successful extensions: 699
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2431332827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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