Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_P08
         (804 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1220 + 9862195-9862281,9862427-9862646,9862764-9862916,986...    29   3.3  
10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,338...    29   5.7  
01_06_0846 + 32408333-32408484,32408560-32408926,32409021-324093...    29   5.7  
01_05_0101 - 18126701-18126707,18127072-18127208                       28   7.6  
03_02_0536 - 9284079-9286034                                           28   10.0 

>01_01_1220 + 9862195-9862281,9862427-9862646,9862764-9862916,
            9863016-9863674,9863749-9863852,9863950-9864192,
            9864262-9864376,9864696-9864909,9864995-9865511,
            9866439-9866448,9867363-9867551,9867755-9868084,
            9868639-9868872,9869303-9869743
          Length = 1171

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -3

Query: 307  PPVQTADDIAAQPPPRSQADI 245
            PP++  DD++ Q PPR+ AD+
Sbjct: 1072 PPLEEPDDVSGQLPPRNGADL 1092


>10_01_0307 +
           3382432-3382608,3382690-3382863,3383600-3383695,
           3384640-3384709,3385878-3386002,3387128-3387268,
           3387362-3387519,3387644-3387803,3390136-3390213,
           3390326-3390385,3390473-3390528,3391886-3392090,
           3394107-3394192,3394296-3394406,3394536-3394607,
           3395453-3395538,3395730-3395878,3396107-3396250,
           3396335-3396442,3396997-3397027,3397609-3397713,
           3398283-3398407,3398807-3398950,3399073-3399177,
           3400748-3400799,3401549-3401696,3401936-3402130,
           3402404-3402647,3403152-3403259,3403887-3404034,
           3405467-3405525,3405876-3405945,3407008-3407333,
           3407666-3409204,3410526-3410733,3410870-3410906,
           3411024-3411072,3411143-3411271
          Length = 2025

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +1

Query: 667 PGSNNSAGSIKGFEAVVLLFKN--LTSFELPHERNDX*AXSXLSVL 798
           PGSN + G + GF  ++  F +  + S+E+ ++  D      L++L
Sbjct: 361 PGSNTNLGPVSGFRGILRTFISAFVASYEISYQTEDSSLGMILNIL 406


>01_06_0846 +
           32408333-32408484,32408560-32408926,32409021-32409301,
           32409877-32409931,32410137-32410331,32410417-32410569
          Length = 400

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 316 GYQPPVQTADDIAAQPPPRSQA 251
           G  PPVQT D   A PPP ++A
Sbjct: 230 GGAPPVQTQDQAQATPPPDTRA 251


>01_05_0101 - 18126701-18126707,18127072-18127208
          Length = 47

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 195 LNLLWSSRGTCAPSTHTISA*DRGGGW 275
           ++L WS  GTCA + HT  A  RG  W
Sbjct: 7   VDLEWSQHGTCAGTGHTDMA-KRGRSW 32


>03_02_0536 - 9284079-9286034
          Length = 651

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 319 YGYQPPVQTADDIAAQPPPRSQADIV*VEGAQVPRDDQ 206
           Y    P +  +++  +PPP+ Q D+V +    V  D+Q
Sbjct: 394 YKEPEPEKVEEEVKPEPPPQPQGDLVDLREETVTADEQ 431


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,724,941
Number of Sequences: 37544
Number of extensions: 238517
Number of successful extensions: 897
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)