Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_P08
         (804 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical pr...    32   0.42 
Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical pr...    32   0.42 
Z68011-3|CAA92014.2|  821|Caenorhabditis elegans Hypothetical pr...    31   1.3  
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    28   9.0  

>Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical protein
            F52G2.2a protein.
          Length = 1319

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -3

Query: 370  GDGDSTSRTHNS---QFNHPYGYQPPVQTADDIAAQPPPR 260
            GDG STS++H+S     NH   YQPPV  +        PR
Sbjct: 1188 GDGRSTSQSHHSAGGSMNHQNFYQPPVYQSSSSQQSYQPR 1227


>Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical protein
            F52G2.2b protein.
          Length = 1129

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -3

Query: 370  GDGDSTSRTHNS---QFNHPYGYQPPVQTADDIAAQPPPR 260
            GDG STS++H+S     NH   YQPPV  +        PR
Sbjct: 998  GDGRSTSQSHHSAGGSMNHQNFYQPPVYQSSSSQQSYQPR 1037


>Z68011-3|CAA92014.2|  821|Caenorhabditis elegans Hypothetical
           protein T21B6.3 protein.
          Length = 821

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = -1

Query: 216 EMTKEDSDYEEKVRNFLAETTQYKRNRKMQELGQQQQPPMP 94
           +  +E    E++ R   A   Q+++ ++ Q+  QQQ+PP P
Sbjct: 224 QQQREQQQREQQHREHQARLQQHQQQQQQQQQQQQQRPPQP 264


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 367  DGDSTSRTHNSQFNHPYGYQPPVQTADDIAAQPPP 263
            D DS S + +S  + P    PP   +DD+   PPP
Sbjct: 1324 DSDSFSTSRSSSPSPPPPPPPPPPPSDDLTPVPPP 1358


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,276,775
Number of Sequences: 27780
Number of extensions: 187093
Number of successful extensions: 717
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)