Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_P08
         (804 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   1.4  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   7.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   7.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   7.7  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -1

Query: 540 HHRH--RVTRPVLVPHRIHHLHHQIRVIQKVLGRRSVVLN 427
           HH+H      P + P   HH HHQ + +Q +  R+   L+
Sbjct: 335 HHQHGNHTMGPTMGPPHHHH-HHQTQSLQHLHYRQPPTLS 373


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
 Frame = -3

Query: 394 LSKRMAM----LGDGDSTSRTHNSQFNHPYGYQPPVQTADDIAAQPPPRSQAD 248
           LSKR ++    LG   STS T +S+ +      P V  +D++       +Q+D
Sbjct: 167 LSKRRSVSECSLGTASSTSSTASSRNSDRSAGSPSVSESDEVDVIGYTSNQSD 219


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 183 FLHSLNLLWSSRGTCAPSTHTI 248
           FL  LNL++ S      STHT+
Sbjct: 481 FLERLNLIFMSSSLQWSSTHTL 502


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 183 FLHSLNLLWSSRGTCAPSTHTI 248
           FL  LNL++ S      STHT+
Sbjct: 519 FLERLNLIFMSSSLQWSSTHTL 540


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,948
Number of Sequences: 438
Number of extensions: 2061
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)