Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_P06
(865 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 147 2e-36
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 145 8e-36
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 109 4e-25
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 53 5e-08
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 51 2e-07
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 36 0.006
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.091
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.16
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 31 0.28
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 30 0.37
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 30 0.37
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.37
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.85
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 29 1.1
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 1.1
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 28 1.5
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 28 1.5
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 28 2.0
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 28 2.0
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 27 2.6
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 2.6
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 27 2.6
SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit Ssr4|Schizos... 27 3.4
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 27 3.4
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 3.4
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 4.5
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 4.5
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.0
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.0
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 6.0
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 26 7.9
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 7.9
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 7.9
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 147 bits (357), Expect = 2e-36
Identities = 68/116 (58%), Positives = 89/116 (76%)
Frame = -3
Query: 566 KENKITITYDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 387
K KITIT DKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++D
Sbjct: 495 KTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDP 554
Query: 386 KLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 219
LK+K+ SDK+ I +TI+WLD N A K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 555 NLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610
Score = 67.3 bits (157), Expect = 3e-12
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = -2
Query: 669 GFPPAPRGVPQIEVTFDIDANGILNVSAIEKSTXQGEQ 556
G PPAPRGVPQIEVTFD+DANGILNVSA+EK T + ++
Sbjct: 461 GIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQK 498
Score = 36.7 bits (81), Expect = 0.004
Identities = 26/68 (38%), Positives = 31/68 (45%)
Frame = -1
Query: 865 SXGIXXXGGXMTTXXKGXITXPX*XDSDIXXXXFENQPRSTHXKYLRVSVL*PKDNNLLG 686
S GI GG MT K T P S++ +NQP + KD NLLG
Sbjct: 398 SLGIETAGGVMTPLIKRNTTIPT-KKSEVFSTYADNQP-GVLIQVFEGERARTKDCNLLG 455
Query: 685 KFEPTGIP 662
KFE +GIP
Sbjct: 456 KFELSGIP 463
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 145 bits (351), Expect = 8e-36
Identities = 67/116 (57%), Positives = 89/116 (76%)
Frame = -3
Query: 566 KENKITITYDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 387
K KITIT DKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++++D
Sbjct: 495 KTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDP 554
Query: 386 KLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 219
LK+K+ SDK+T+ +TI+WLDSN A K+E+E KQKELE + NPI+ K+YQ
Sbjct: 555 NLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610
Score = 67.3 bits (157), Expect = 3e-12
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = -2
Query: 669 GFPPAPRGVPQIEVTFDIDANGILNVSAIEKSTXQGEQ 556
G PPAPRGVPQIEVTFD+DANGILNVSA+EK T + ++
Sbjct: 461 GIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQK 498
Score = 37.1 bits (82), Expect = 0.003
Identities = 27/68 (39%), Positives = 31/68 (45%)
Frame = -1
Query: 865 SXGIXXXGGXMTTXXKGXITXPX*XDSDIXXXXFENQPRSTHXKYLRVSVL*PKDNNLLG 686
S GI GG MT K T P S+I +NQP + KD NLLG
Sbjct: 398 SMGIETAGGVMTPLIKRNTTIPT-KKSEIFSTYSDNQP-GVLIQVFEGERARTKDCNLLG 455
Query: 685 KFEPTGIP 662
KFE +GIP
Sbjct: 456 KFELSGIP 463
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 109 bits (263), Expect = 4e-25
Identities = 53/124 (42%), Positives = 81/124 (65%), Gaps = 2/124 (1%)
Frame = -3
Query: 587 LSRSPPXKENKITITYDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSM 408
+ +S K K+ I DKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+
Sbjct: 518 VDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSL 577
Query: 407 KSTM-EDEKLKEKISDSDKQTILDKCNDTIKWLD-SNQLADKEEYEHKQKELEGIYNPII 234
K +DE+L K+ DKQ +LD D +WL+ + A KEE+E ++++L+ + +PI
Sbjct: 578 KGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPIT 637
Query: 233 TKMY 222
K+Y
Sbjct: 638 QKLY 641
Score = 61.3 bits (142), Expect = 2e-10
Identities = 25/32 (78%), Positives = 30/32 (93%)
Frame = -2
Query: 669 GFPPAPRGVPQIEVTFDIDANGILNVSAIEKS 574
G PPAPRGVPQIEVTF++DANG+L VSA++KS
Sbjct: 490 GIPPAPRGVPQIEVTFEVDANGVLTVSAVDKS 521
Score = 31.5 bits (68), Expect = 0.16
Identities = 25/66 (37%), Positives = 27/66 (40%)
Frame = -1
Query: 859 GIXXXGGXMTTXXKGXITXPX*XDSDIXXXXFENQPRSTHXKYLRVSVL*PKDNNLLGKF 680
GI GG MT P S I +NQ Y L KDNNLLGKF
Sbjct: 429 GIETTGGVMTKLIGRNTPIPT-RKSQIFSTAVDNQNTVLIQVYEGERTL-TKDNNLLGKF 486
Query: 679 EPTGIP 662
+ GIP
Sbjct: 487 DLRGIP 492
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 53.2 bits (122), Expect = 5e-08
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = -2
Query: 684 NSSRPGFPPAPRGVPQIEVTFDIDANGILNVSAIEKST 571
N G PAP+G PQIEV+FD+DA+GI+NVSA +K+T
Sbjct: 499 NFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKAT 536
Score = 51.6 bits (118), Expect = 1e-07
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Frame = -3
Query: 566 KENKITITYDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME-- 393
K++ IT+ G L+ EIE MV +AEKYR D +KE I+ N ES C ++S ++
Sbjct: 538 KDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIH 596
Query: 392 DEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 219
+KL ++ + + I D K ++ E+ + K E++ + + +Y+
Sbjct: 597 KDKLDQQAVEDLRSKITDLRETVAKVNAGDEGITSEDMKKKIDEIQQLSLKVFESVYK 654
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 50.8 bits (116), Expect = 2e-07
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = -2
Query: 669 GFPPAPRGVPQIEVTFDIDANGILNVSAIEKST 571
G PP PRG ++E TF++DANGIL V+A+EK+T
Sbjct: 466 GIPPMPRGQAELEATFELDANGILKVTAVEKTT 498
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 36.3 bits (80), Expect = 0.006
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = -3
Query: 554 ITITYDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKSTMED--EK 384
++++ + RL E +E+ EAE DK ET+ KNALE Y + ++ ++D
Sbjct: 542 LSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDDIYAP 600
Query: 383 LKEKISDSDKQTILDKCNDTIKWL-DSNQLADKEEYEHKQKELEGIYNPI 237
+ S + +L K D WL + + K Y K ++L + PI
Sbjct: 601 FTNEEESSKFKEMLTKAED---WLYEEGEDTTKAVYTAKLEDLMRVGGPI 647
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.091
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = -3
Query: 518 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 339
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 338 K 336
K
Sbjct: 79 K 79
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.16
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = -3
Query: 536 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 357
+GR + + N+ E + DDKQ + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 356 KQTILDKCNDTIK 318
+ LDK D K
Sbjct: 1318 EMEDLDKMEDLEK 1330
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 30.7 bits (66), Expect = 0.28
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Frame = -3
Query: 563 ENKITITYDKGRLSKEEIERMVNEAEKYRNEDDKQKETI--QAKNALESYCFSMKSTMED 390
+N + YD ++ K + MVN ++ E+ K +E Q + LE E
Sbjct: 106 KNNLLNVYDSLKMQKASVSSMVNRKQRAAKEEQKIQEEFERQITDLLE----------EQ 155
Query: 389 EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 261
++LK +I + +T ++ N + + + A +EEYE + E
Sbjct: 156 QQLKLEIERLEAET--ERANSETEQYEKQKEALEEEYEELRNE 196
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 30.3 bits (65), Expect = 0.37
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Frame = -3
Query: 581 RSPPXKENKITITYDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 402
+S K N D+ + +EE E ++EK ++ K + KNA ++ M
Sbjct: 80 KSKKAKANAFEAFADEQSVEEEEEE----DSEKPVRKNKKSSKKASPKNAFDALADDMDD 135
Query: 401 TMEDEKLKEKISDSDKQTILDKC-NDTIKWLDSNQLADKEEYEHKQKE 261
DE+ E S K+ K +D + LD + E+ + K+K+
Sbjct: 136 LSLDEEESESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKKK 183
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 30.3 bits (65), Expect = 0.37
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = -3
Query: 536 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKL-KEKISDS 360
K R +E I + EAE+ + E ++Q+ Q K E + K E EKL KE+I
Sbjct: 82 KQRAQEERIRQ--KEAERLKREKERQQRE-QEKKLREQEKIAAKKMKELEKLEKERIRLQ 138
Query: 359 DKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 261
++Q ++ + ++ + Q +E+ +K+++
Sbjct: 139 EQQRRKEERDQKLREKEEAQRLRQEQILNKERQ 171
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 0.37
Identities = 23/90 (25%), Positives = 43/90 (47%)
Frame = -3
Query: 524 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI 345
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFDV--- 1661
Query: 344 LDKCNDTIKWLDSNQLADKEEYEHKQKELE 255
K + + A YE K ++L+
Sbjct: 1662 --KLKKVVAETEFRSKAKISVYEKKTRDLQ 1689
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.85
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 536 KGRLSKEEIERMVNEAEKYRNEDD 465
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 28.7 bits (61), Expect = 1.1
Identities = 22/92 (23%), Positives = 41/92 (44%)
Frame = -3
Query: 539 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDS 360
+K SKE ++ EAE+ E +E + + + S K +++ LK K D+
Sbjct: 436 EKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKRRLDE--LKAKAEDA 493
Query: 359 DKQTILDKCNDTIKWLDSNQLADKEEYEHKQK 264
+++ D +K+ L + EY +QK
Sbjct: 494 ERRNDFTLAAD-LKYYGIPDLQKRIEYLEQQK 524
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 380 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 255
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -3
Query: 587 LSRSPPXKENKITITYDKGRLSKEEIERMVNEAEKYRNEDDK 462
L + P K+NK+ I YD G +S + E+ N D+
Sbjct: 525 LKKRPSDKDNKLHIHYDDGAMSSTSYSTDFTDDEEETNTKDE 566
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 28.3 bits (60), Expect = 1.5
Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = -3
Query: 527 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE-SYCFSMKSTMEDEKLKEKISDSDKQ 351
L+ + ++ + E E K+ ET++ KN+ + + ++ E LK +K
Sbjct: 485 LASKNSDKALAETNIRLQEVTKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITKEKD 544
Query: 350 TILDKCNDTIKWLDSN--QLADK-EEYEHKQKELEGIYNPII 234
++++ IK + N +L +EY +K K+ E YN ++
Sbjct: 545 RLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVM 586
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 27.9 bits (59), Expect = 2.0
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = -3
Query: 566 KENKITITYDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 387
K+ K T D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 530 KKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KNR 580
Query: 386 KLKEKISD 363
KLK+K S+
Sbjct: 581 KLKKKASN 588
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/86 (19%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = -3
Query: 518 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 342
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 341 DKCNDTIKWLDSNQLADKEEYEHKQK 264
+ + + + D + + K+K
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRK 575
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 27.5 bits (58), Expect = 2.6
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Frame = -3
Query: 536 KGRLSKEEIERMVN---EAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 366
KG+ K+ +E N E EK + +A+ A + +E EK KEK
Sbjct: 221 KGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSAKLEKEKAKEKQK 280
Query: 365 DSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELE 255
D D++ DT+ D NQ+ +E E QKE++
Sbjct: 281 DKDQE------QDTVS--DKNQI---DEIEKGQKEVD 306
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.5 bits (58), Expect = 2.6
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = -3
Query: 530 RLSKEEIERMVNEAEKYRNEDDKQKETIQAK-NALESYCFSMKSTMEDEKLKEKISDSDK 354
+L++E +ER+ E ++YR + + E K +LE ++ + L+ + D
Sbjct: 950 KLAEEMVERVKTEYDEYRLQTSESLEKNHLKITSLEQRIVILQDEIASSSLRCENITKDS 1009
Query: 353 QTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIY 246
+T + + K L +N+L+ E + E E Y
Sbjct: 1010 ETRVALLLEENKHL-NNELSSHRNAEKQHLEKENDY 1044
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.5 bits (58), Expect = 2.6
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = -3
Query: 572 PXKENKITITYDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 393
P + I +T + R S E V + E ++D + +++NA + S +
Sbjct: 234 PDLSSLIRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLS 291
Query: 392 DEKLKEKISDSDKQTILDKCNDTIK 318
+ +KEK S +K DK + K
Sbjct: 292 ESSMKEKQSKIEKYMKSDKSSKNFK 316
>SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit
Ssr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 27.1 bits (57), Expect = 3.4
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = -3
Query: 575 PPXKENKITITYDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM 396
PP + + G+ K+ E++V + +KY++ T N L+ + ++KS
Sbjct: 310 PPALWQEPNSMEELGKELKDNKEQLVKQDQKYQSLQGDLSYTDSMSNLLKEFS-NIKSAE 368
Query: 395 EDEKLKEKISD 363
E + L++KI +
Sbjct: 369 ECDVLQKKIEE 379
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 27.1 bits (57), Expect = 3.4
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -3
Query: 581 RSPPXKENKITITYDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 426
R P KE + +G L E E NEA++ NE+ E +N E
Sbjct: 78 RQSPSKE----APFGEGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 503 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 399
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.6 bits (56), Expect = 4.5
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = -3
Query: 500 VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTI 321
+NE + Y + + Q +T + L S C + S L + D + +L C I
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELS--GKNVLFFYFLEDDSEKLLKACQHFI 887
Query: 320 KWLDSNQLADKEEYEHKQKELEGIYNPI 237
DS + ++E K + I N I
Sbjct: 888 CVKDSIKRLGDNKFEDKSLRICTIPNSI 915
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -3
Query: 473 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 312
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 6.0
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = -3
Query: 521 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 369
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 368 SDSDKQTILDKCND 327
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 6.0
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -3
Query: 518 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 348
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -3
Query: 524 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 402
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 7.9
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -3
Query: 470 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLA 294
D ++E I A AL + E+ I +K T+ D+ NDT +WLD +L
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLG 237
Query: 293 DK 288
DK
Sbjct: 238 DK 239
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 25.8 bits (54), Expect = 7.9
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = -3
Query: 536 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 357
K S I V + E+ + D T+Q K +S FS K + E L +KIS+ D
Sbjct: 390 KALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLLKKISEID 444
Query: 356 KQTILDKC 333
QT ++C
Sbjct: 445 SQTSFEQC 452
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = -3
Query: 521 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 342
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 341 D 339
D
Sbjct: 451 D 451
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,848,911
Number of Sequences: 5004
Number of extensions: 53958
Number of successful extensions: 249
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 430470850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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