Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_P05
         (851 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   4.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   4.1  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   4.1  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   5.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   7.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   7.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.4  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -3

Query: 363 NPGEQFTRDCNDCTCSAD-GKSVFCTLRLCDQDI 265
           +P +Q+T+DC+  T S     S   ++ + DQ+I
Sbjct: 38  SPNQQYTKDCSSPTPSDKLNTSTTSSVNVNDQNI 71


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 18/55 (32%), Positives = 22/55 (40%)
 Frame = -3

Query: 462 CTDEGRHATCTLMRCPQEKEETHAHDQDPGFRCNPGEQFTRDCNDCTCSADGKSV 298
           C DE    +CT+     E +   A D DP     P         DC CSADG  +
Sbjct: 141 CKDESDENSCTV-----ETDPNRAPDCDPTQCVLP---------DCFCSADGTRI 181


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 574 YC*ERCNPYECRRSLGLPYRRDP 642
           YC  +   Y  RRS+G P+ R P
Sbjct: 626 YCGIKDKLYPDRRSMGYPFDRMP 648


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 18/55 (32%), Positives = 22/55 (40%)
 Frame = -3

Query: 462 CTDEGRHATCTLMRCPQEKEETHAHDQDPGFRCNPGEQFTRDCNDCTCSADGKSV 298
           C DE    +CT+     E +   A D DP     P         DC CSADG  +
Sbjct: 134 CKDESDENSCTV-----ETDPNRALDCDPTQCVLP---------DCFCSADGTRI 174


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -2

Query: 166 LYVYFKYNANSLCLFRICFT 107
           ++V   Y AN +C+  +C++
Sbjct: 912 IFVSTLYTANVVCICHVCYS 931


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 115 CFTYYACILDDFYL*RPISR 56
           CF YY  ++  FY  R  +R
Sbjct: 77  CFNYYVIVVTTFYKRRTWTR 96


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 670 RTRXPVDCNKGLCDKEGQDFSC 605
           + + PV    G CD+E   ++C
Sbjct: 490 QNKCPVKRGNGRCDEECNTYAC 511



 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 571 GYC*ERCNPYEC 606
           G C E CN Y C
Sbjct: 500 GRCDEECNTYAC 511


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,791
Number of Sequences: 336
Number of extensions: 3806
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)