SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_P05
         (851 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D50406-1|BAA34060.1|  971|Homo sapiens ST15 protein.                   38   0.061
AL158830-3|CAD13384.2|  971|Homo sapiens reversion-inducing-cyst...    38   0.061
AL138834-5|CAH70155.1|  971|Homo sapiens reversion-inducing-cyst...    38   0.061
M94132-1|AAA59164.1|  984|Homo sapiens MUC2 protein.                   34   0.75 
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.                  34   0.75 
AL138836-3|CAC22313.2|  602|Homo sapiens multiple EGF-like-domai...    34   0.75 
AB011542-1|BAA32470.1|  375|Homo sapiens MEGF9 protein.                34   0.75 
AY228704-1|AAP15181.1|  553|Homo sapiens forkhead winged/helix t...    32   3.0  
AF048693-1|AAC18081.1|  553|Homo sapiens transcription factor fo...    32   3.0  
Y09788-1|CAA70926.1|  845|Homo sapiens mucin protein.                  31   4.0  
U95031-1|AAB65151.1|  879|Homo sapiens sublingual gland mucin pr...    31   4.0  
U78551-1|AAC51343.1|  390|Homo sapiens mucin MUC5B protein.            31   4.0  
L35013-1|AAA60300.1|  424|Homo sapiens spliceosomal protein prot...    31   4.0  
BC090883-1|AAH90883.1|  424|Homo sapiens splicing factor 3b, sub...    31   4.0  
BC013886-1|AAH13886.1|  424|Homo sapiens splicing factor 3b, sub...    31   4.0  
BC004273-1|AAH04273.1|  424|Homo sapiens splicing factor 3b, sub...    31   4.0  
AL591493-2|CAI12554.1|  424|Homo sapiens splicing factor 3b, sub...    31   4.0  
AL590487-2|CAI12648.1|  424|Homo sapiens splicing factor 3b, sub...    31   4.0  
AK223322-1|BAD97042.1|  424|Homo sapiens splicing factor 3b, sub...    31   4.0  
AL034344-3|CAB81658.1|  553|Homo sapiens forkhead box C1 protein.      31   5.3  
AF078096-1|AAC72915.1|  553|Homo sapiens forkhead/winged helix-l...    31   5.3  
X79683-1|CAA56130.1| 1798|Homo sapiens beta2/S laminin chain pro...    31   7.0  
AF041835-1|AAD36991.1| 1587|Homo sapiens laminin gamma 3 chain p...    31   7.0  
AB208887-1|BAD92124.1| 1379|Homo sapiens laminin, gamma 3 precur...    31   7.0  
AL583807-2|CAH69984.3| 1575|Homo sapiens laminin, gamma 3 protein.     30   9.3  
AL583807-1|CAH69983.1| 1587|Homo sapiens laminin, gamma 3 protein.     30   9.3  
AL355872-3|CAI39529.1| 1587|Homo sapiens laminin, gamma 3 protein.     30   9.3  
AL355872-2|CAI39530.2| 1619|Homo sapiens laminin, gamma 3 protein.     30   9.3  

>D50406-1|BAA34060.1|  971|Homo sapiens ST15 protein.
          Length = 971

 Score = 37.5 bits (83), Expect = 0.061
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = -3

Query: 501 PAPSTXQGC-NVCRCTDEGRHATCTLMRCPQEKEETHAHDQDPGFRCNPGEQFTRDCNDC 325
           P+ +   GC  +C C   G    C  M C   ++         G R + G  F+ DCN C
Sbjct: 546 PSSAGEVGCYKICSCGQSGLLENCMEMHCIDLQKSCIVG----GKRKSHGTSFSIDCNVC 601

Query: 324 TCSADGKSVFCTLRLC 277
           +C A   ++ C+ RLC
Sbjct: 602 SCFAG--NLVCSTRLC 615


>AL158830-3|CAD13384.2|  971|Homo sapiens
           reversion-inducing-cysteine-rich protein with kazal
           motifs protein.
          Length = 971

 Score = 37.5 bits (83), Expect = 0.061
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = -3

Query: 501 PAPSTXQGC-NVCRCTDEGRHATCTLMRCPQEKEETHAHDQDPGFRCNPGEQFTRDCNDC 325
           P+ +   GC  +C C   G    C  M C   ++         G R + G  F+ DCN C
Sbjct: 546 PSSAGEVGCYKICSCGQSGLLENCMEMHCIDLQKSCIVG----GKRKSHGTSFSIDCNVC 601

Query: 324 TCSADGKSVFCTLRLC 277
           +C A   ++ C+ RLC
Sbjct: 602 SCFAG--NLVCSTRLC 615


>AL138834-5|CAH70155.1|  971|Homo sapiens
           reversion-inducing-cysteine-rich protein with kazal
           motifs protein.
          Length = 971

 Score = 37.5 bits (83), Expect = 0.061
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = -3

Query: 501 PAPSTXQGC-NVCRCTDEGRHATCTLMRCPQEKEETHAHDQDPGFRCNPGEQFTRDCNDC 325
           P+ +   GC  +C C   G    C  M C   ++         G R + G  F+ DCN C
Sbjct: 546 PSSAGEVGCYKICSCGQSGLLENCMEMHCIDLQKSCIVG----GKRKSHGTSFSIDCNVC 601

Query: 324 TCSADGKSVFCTLRLC 277
           +C A   ++ C+ RLC
Sbjct: 602 SCFAG--NLVCSTRLC 615


>M94132-1|AAA59164.1|  984|Homo sapiens MUC2 protein.
          Length = 984

 Score = 33.9 bits (74), Expect = 0.75
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -3

Query: 357 GEQFTRDCNDCTCSADGKSVFCTLRLCDQDITPH 256
           GE F  DC +C C   G  + C  + C Q    H
Sbjct: 633 GEHFEFDCKNCVCLEGGSGIICQPKRCSQKPVTH 666


>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
          Length = 5179

 Score = 33.9 bits (74), Expect = 0.75
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -3

Query: 357  GEQFTRDCNDCTCSADGKSVFCTLRLCDQDITPH 256
            GE F  DC +C C   G  + C  + C Q    H
Sbjct: 4828 GEHFEFDCKNCVCLEGGSGIICQPKRCSQKPVTH 4861


>AL138836-3|CAC22313.2|  602|Homo sapiens multiple EGF-like-domains
           9 protein.
          Length = 602

 Score = 33.9 bits (74), Expect = 0.75
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
 Frame = -3

Query: 480 GCNVCRCTDEGRHATC-----TLMRCPQEKEETHAHDQDPGFRCNPGEQFTRDCNDCTCS 316
           GC  C+C +  R A+C       + C +  +  H  +   GF  +P    T++C  C CS
Sbjct: 297 GCLPCQCNN--RSASCDALTGACLNCQENSKGNHCEECKEGFYQSPDA--TKECLRCPCS 352

Query: 315 ADGKSVFCTLR 283
           A   +  C+++
Sbjct: 353 AVTSTGSCSIK 363


>AB011542-1|BAA32470.1|  375|Homo sapiens MEGF9 protein.
          Length = 375

 Score = 33.9 bits (74), Expect = 0.75
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
 Frame = -3

Query: 480 GCNVCRCTDEGRHATC-----TLMRCPQEKEETHAHDQDPGFRCNPGEQFTRDCNDCTCS 316
           GC  C+C +  R A+C       + C +  +  H  +   GF  +P    T++C  C CS
Sbjct: 70  GCLPCQCNN--RSASCDALTGACLNCQENSKGNHCEECKEGFYQSPDA--TKECLRCPCS 125

Query: 315 ADGKSVFCTLR 283
           A   +  C+++
Sbjct: 126 AVTSTGSCSIK 136


>AY228704-1|AAP15181.1|  553|Homo sapiens forkhead winged/helix
           transcription factor mutant 2 protein.
          Length = 553

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/44 (43%), Positives = 21/44 (47%)
 Frame = -2

Query: 490 YNXGLQRMPLY*RGPTRHLHLDAMPPGEGGDACARPGSRFSLQP 359
           Y+  LQ M LY  G  R  HL   P G GG A   P   +SL P
Sbjct: 393 YHCNLQAMSLYAAGE-RGGHLQGAPGGAGGSAVDNPLPDYSLPP 435


>AF048693-1|AAC18081.1|  553|Homo sapiens transcription factor
           forkhead-like 7 protein.
          Length = 553

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/44 (43%), Positives = 21/44 (47%)
 Frame = -2

Query: 490 YNXGLQRMPLY*RGPTRHLHLDAMPPGEGGDACARPGSRFSLQP 359
           Y+  LQ M LY  G  R  HL   P G GG A   P   +SL P
Sbjct: 393 YHCNLQAMSLYAAGE-RGGHLQGAPGGAGGSAVDNPLPDYSLPP 435


>Y09788-1|CAA70926.1|  845|Homo sapiens mucin protein.
          Length = 845

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = -3

Query: 375 GFRCNPGEQFTRDCNDCTCSADGKSVFCTLRLCDQDITP 259
           GF   PGE++  +C  C C     SV C    CD    P
Sbjct: 502 GFPKFPGERWVSNCQSCVCDEGSVSVQCKPLPCDAQGQP 540


>U95031-1|AAB65151.1|  879|Homo sapiens sublingual gland mucin
           protein.
          Length = 879

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = -3

Query: 375 GFRCNPGEQFTRDCNDCTCSADGKSVFCTLRLCDQDITP 259
           GF   PGE++  +C  C C     SV C    CD    P
Sbjct: 552 GFPKFPGERWVSNCQSCVCDEGSVSVQCKPLPCDAQGQP 590


>U78551-1|AAC51343.1|  390|Homo sapiens mucin MUC5B protein.
          Length = 390

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = -3

Query: 375 GFRCNPGEQFTRDCNDCTCSADGKSVFCTLRLCDQDITP 259
           GF   PGE++  +C  C C     SV C    CD    P
Sbjct: 47  GFPKFPGERWVSNCQSCVCDEGSVSVQCKPLPCDAQGQP 85


>L35013-1|AAA60300.1|  424|Homo sapiens spliceosomal protein
           protein.
          Length = 424

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -2

Query: 502 PGSVYNXGLQRMPLY*RGPTRHLHLDAMPPGEGGDACARP 383
           PG + + G+ +M L   GP    H  A PPG GG    RP
Sbjct: 298 PGGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRP 337


>BC090883-1|AAH90883.1|  424|Homo sapiens splicing factor 3b,
           subunit 4, 49kDa protein.
          Length = 424

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -2

Query: 502 PGSVYNXGLQRMPLY*RGPTRHLHLDAMPPGEGGDACARP 383
           PG + + G+ +M L   GP    H  A PPG GG    RP
Sbjct: 298 PGGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRP 337


>BC013886-1|AAH13886.1|  424|Homo sapiens splicing factor 3b,
           subunit 4, 49kDa protein.
          Length = 424

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -2

Query: 502 PGSVYNXGLQRMPLY*RGPTRHLHLDAMPPGEGGDACARP 383
           PG + + G+ +M L   GP    H  A PPG GG    RP
Sbjct: 298 PGGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRP 337


>BC004273-1|AAH04273.1|  424|Homo sapiens splicing factor 3b,
           subunit 4, 49kDa protein.
          Length = 424

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -2

Query: 502 PGSVYNXGLQRMPLY*RGPTRHLHLDAMPPGEGGDACARP 383
           PG + + G+ +M L   GP    H  A PPG GG    RP
Sbjct: 298 PGGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRP 337


>AL591493-2|CAI12554.1|  424|Homo sapiens splicing factor 3b,
           subunit 4, 49kDa protein.
          Length = 424

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -2

Query: 502 PGSVYNXGLQRMPLY*RGPTRHLHLDAMPPGEGGDACARP 383
           PG + + G+ +M L   GP    H  A PPG GG    RP
Sbjct: 298 PGGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRP 337


>AL590487-2|CAI12648.1|  424|Homo sapiens splicing factor 3b,
           subunit 4, 49kDa protein.
          Length = 424

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -2

Query: 502 PGSVYNXGLQRMPLY*RGPTRHLHLDAMPPGEGGDACARP 383
           PG + + G+ +M L   GP    H  A PPG GG    RP
Sbjct: 298 PGGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRP 337


>AK223322-1|BAD97042.1|  424|Homo sapiens splicing factor 3b,
           subunit 4 variant protein.
          Length = 424

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -2

Query: 502 PGSVYNXGLQRMPLY*RGPTRHLHLDAMPPGEGGDACARP 383
           PG + + G+ +M L   GP    H  A PPG GG    RP
Sbjct: 298 PGGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRP 337


>AL034344-3|CAB81658.1|  553|Homo sapiens forkhead box C1 protein.
          Length = 553

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 19/44 (43%), Positives = 21/44 (47%)
 Frame = -2

Query: 490 YNXGLQRMPLY*RGPTRHLHLDAMPPGEGGDACARPGSRFSLQP 359
           Y+  LQ M LY  G  R  HL   P G GG A   P   +SL P
Sbjct: 393 YHCNLQAMSLYAAGE-RGGHLQGAPGGAGGSAVDDPLPDYSLPP 435


>AF078096-1|AAC72915.1|  553|Homo sapiens forkhead/winged helix-like
           transcription factor 7 protein.
          Length = 553

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 19/44 (43%), Positives = 21/44 (47%)
 Frame = -2

Query: 490 YNXGLQRMPLY*RGPTRHLHLDAMPPGEGGDACARPGSRFSLQP 359
           Y+  LQ M LY  G  R  HL   P G GG A   P   +SL P
Sbjct: 393 YHCNLQAMSLYAAGE-RGGHLQGAPGGAGGSAVDDPLPDYSLPP 435


>X79683-1|CAA56130.1| 1798|Homo sapiens beta2/S laminin chain protein.
          Length = 1798

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 9/78 (11%)
 Frame = -3

Query: 513  PRAFPAPSTXQG-CNVCRCT---DEGRHATCT-----LMRCPQEKEETHAHDQDPGFRCN 361
            P  F  PS   G C +C C+   D      C       +RC    E  H     PGF   
Sbjct: 970  PGQFGDPSRPGGRCQLCECSGNIDPMDPDACDPHPGQCLRCLHHTEGPHCAHSKPGFH-- 1027

Query: 360  PGEQFTRDCNDCTCSADG 307
             G+   + C+ CTC+  G
Sbjct: 1028 -GQAARQSCHRCTCNLLG 1044


>AF041835-1|AAD36991.1| 1587|Homo sapiens laminin gamma 3 chain
            precursor protein.
          Length = 1587

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 31/133 (23%), Positives = 43/133 (32%), Gaps = 1/133 (0%)
 Frame = -3

Query: 651  TAIRVSAIRKAKTSPALVWIATLSTVTTMLSPSTATELKEK*VRSQPRAFPAPSTXQGCN 472
            T +R+++ R   + PA  W+   S  T         +  E       R  P       C 
Sbjct: 652  TEVRLTSARPGLSPPAS-WVEICSCPTGYTG-----QFCESCAPGYKREMPQGGPYASCV 705

Query: 471  VCRCTDEGRHATCT-LMRCPQEKEETHAHDQDPGFRCNPGEQFTRDCNDCTCSADGKSVF 295
             C C   G     T +  C    E        PGF  NP      DC  C C   G+S  
Sbjct: 706  PCTCNQHGTCDPNTGICVCSHHTEGPSCERCLPGFYGNPFAGQADDCQPCPC--PGQSAC 763

Query: 294  CTLRLCDQDITPH 256
             T+    + +  H
Sbjct: 764  TTIPESGEVVCTH 776


>AB208887-1|BAD92124.1| 1379|Homo sapiens laminin, gamma 3 precursor
           variant protein.
          Length = 1379

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 31/133 (23%), Positives = 43/133 (32%), Gaps = 1/133 (0%)
 Frame = -3

Query: 651 TAIRVSAIRKAKTSPALVWIATLSTVTTMLSPSTATELKEK*VRSQPRAFPAPSTXQGCN 472
           T +R+++ R   + PA  W+   S  T         +  E       R  P       C 
Sbjct: 456 TEVRLTSARPGLSPPAS-WVEICSCPTGYTG-----QFCESCAPGYKREMPQGGPYASCV 509

Query: 471 VCRCTDEGRHATCT-LMRCPQEKEETHAHDQDPGFRCNPGEQFTRDCNDCTCSADGKSVF 295
            C C   G     T +  C    E        PGF  NP      DC  C C   G+S  
Sbjct: 510 PCTCNQHGTCDPNTGICVCSHHTEGPSCERCLPGFYGNPFAGQADDCQPCPC--PGQSAC 567

Query: 294 CTLRLCDQDITPH 256
            T+    + +  H
Sbjct: 568 TTIPESGEVVCTH 580


>AL583807-2|CAH69984.3| 1575|Homo sapiens laminin, gamma 3 protein.
          Length = 1575

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 30/123 (24%), Positives = 40/123 (32%), Gaps = 1/123 (0%)
 Frame = -3

Query: 651 TAIRVSAIRKAKTSPALVWIATLSTVTTMLSPSTATELKEK*VRSQPRAFPAPSTXQGCN 472
           T +R+++ R   + PA  W+   S  T         +  E       R  P       C 
Sbjct: 652 TEVRLTSARPGLSPPAS-WVEICSCPTGYTG-----QFCESCAPGYKREMPQGGPYASCV 705

Query: 471 VCRCTDEGRHATCT-LMRCPQEKEETHAHDQDPGFRCNPGEQFTRDCNDCTCSADGKSVF 295
            C C   G     T +  C    E        PGF  NP      DC  C C   G+S  
Sbjct: 706 PCTCNQHGTCDPNTGICVCSHHTEGPSCERCLPGFYGNPFAGQADDCQPCPC--PGQSAC 763

Query: 294 CTL 286
            T+
Sbjct: 764 TTI 766


>AL583807-1|CAH69983.1| 1587|Homo sapiens laminin, gamma 3 protein.
          Length = 1587

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 30/123 (24%), Positives = 40/123 (32%), Gaps = 1/123 (0%)
 Frame = -3

Query: 651 TAIRVSAIRKAKTSPALVWIATLSTVTTMLSPSTATELKEK*VRSQPRAFPAPSTXQGCN 472
           T +R+++ R   + PA  W+   S  T         +  E       R  P       C 
Sbjct: 652 TEVRLTSARPGLSPPAS-WVEICSCPTGYTG-----QFCESCAPGYKREMPQGGPYASCV 705

Query: 471 VCRCTDEGRHATCT-LMRCPQEKEETHAHDQDPGFRCNPGEQFTRDCNDCTCSADGKSVF 295
            C C   G     T +  C    E        PGF  NP      DC  C C   G+S  
Sbjct: 706 PCTCNQHGTCDPNTGICVCSHHTEGPSCERCLPGFYGNPFAGQADDCQPCPC--PGQSAC 763

Query: 294 CTL 286
            T+
Sbjct: 764 TTI 766


>AL355872-3|CAI39529.1| 1587|Homo sapiens laminin, gamma 3 protein.
          Length = 1587

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 30/123 (24%), Positives = 40/123 (32%), Gaps = 1/123 (0%)
 Frame = -3

Query: 651 TAIRVSAIRKAKTSPALVWIATLSTVTTMLSPSTATELKEK*VRSQPRAFPAPSTXQGCN 472
           T +R+++ R   + PA  W+   S  T         +  E       R  P       C 
Sbjct: 652 TEVRLTSARPGLSPPAS-WVEICSCPTGYTG-----QFCESCAPGYKREMPQGGPYASCV 705

Query: 471 VCRCTDEGRHATCT-LMRCPQEKEETHAHDQDPGFRCNPGEQFTRDCNDCTCSADGKSVF 295
            C C   G     T +  C    E        PGF  NP      DC  C C   G+S  
Sbjct: 706 PCTCNQHGTCDPNTGICVCSHHTEGPSCERCLPGFYGNPFAGQADDCQPCPC--PGQSAC 763

Query: 294 CTL 286
            T+
Sbjct: 764 TTI 766


>AL355872-2|CAI39530.2| 1619|Homo sapiens laminin, gamma 3 protein.
          Length = 1619

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 30/123 (24%), Positives = 40/123 (32%), Gaps = 1/123 (0%)
 Frame = -3

Query: 651  TAIRVSAIRKAKTSPALVWIATLSTVTTMLSPSTATELKEK*VRSQPRAFPAPSTXQGCN 472
            T +R+++ R   + PA  W+   S  T         +  E       R  P       C 
Sbjct: 696  TEVRLTSARPGLSPPAS-WVEICSCPTGYTG-----QFCESCAPGYKREMPQGGPYASCV 749

Query: 471  VCRCTDEGRHATCT-LMRCPQEKEETHAHDQDPGFRCNPGEQFTRDCNDCTCSADGKSVF 295
             C C   G     T +  C    E        PGF  NP      DC  C C   G+S  
Sbjct: 750  PCTCNQHGTCDPNTGICVCSHHTEGPSCERCLPGFYGNPFAGQADDCQPCPC--PGQSAC 807

Query: 294  CTL 286
             T+
Sbjct: 808  TTI 810


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,243,458
Number of Sequences: 237096
Number of extensions: 2428567
Number of successful extensions: 6397
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 5656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6395
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -