Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_P05
         (851 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   2.7  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   4.7  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.2  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           22   8.2  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           22   8.2  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -3

Query: 438 TCTLMRCPQEKEETHAHDQDPGFRCNPGEQFTRDCNDC 325
           TC  + C Q +E  + HD+     C PG+    D   C
Sbjct: 465 TCCWV-CDQCEEYEYVHDEYTCMDCGPGKWPHEDKRGC 501


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +2

Query: 416 GHRIKVQVACRPSSVQRHTLQPXIVDGAGNARGWLLTYFSFSSVAVEGLSIVVTVESVAI 595
           G +I + +    S      L   I+     A   L  Y  F+ + V GLS+V+T+  + +
Sbjct: 264 GEKIALCINILLSQTMFFLLISEIIPSTSLALPLLGKYLLFTMILV-GLSVVITIVILNV 322

Query: 596 H 598
           H
Sbjct: 323 H 323


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 574 YC*ERCNPYECRRSLGLPYRRDP 642
           YC  R   Y   R++G P+ R P
Sbjct: 627 YCGLRDRKYPDARAMGYPFDRQP 649


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -3

Query: 342 RDCNDCTCSADGKSVFC 292
           R CND +   DG  + C
Sbjct: 101 RQCNDTSIGVDGCDLMC 117


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -3

Query: 342 RDCNDCTCSADGKSVFC 292
           R CND +   DG  + C
Sbjct: 102 RQCNDTSIGVDGCDLMC 118


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,998
Number of Sequences: 438
Number of extensions: 4264
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)