Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_P04
(856 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5RH26 Cluster: ATP synthase gamma chain; n=8; Bilateri... 41 0.046
UniRef50_Q96250 Cluster: ATP synthase gamma chain, mitochondrial... 40 0.080
UniRef50_A2Z5X7 Cluster: ATP synthase gamma chain; n=3; Oryza sa... 39 0.14
UniRef50_Q54DF1 Cluster: ATP synthase gamma chain; n=1; Dictyost... 36 1.7
UniRef50_Q4N9B3 Cluster: ATP synthase F1, gamma chain, putative;... 36 1.7
UniRef50_Q7RKU7 Cluster: ATP synthase gamma chain; n=5; Plasmodi... 35 2.3
UniRef50_Q4LDE7 Cluster: ATP synthase gamma chain, mitochondrial... 35 3.0
UniRef50_O21267 Cluster: ATP synthase gamma chain; n=1; Reclinom... 35 3.0
UniRef50_Q1IIG7 Cluster: ATP synthase gamma chain; n=1; Acidobac... 34 4.0
UniRef50_Q4P473 Cluster: ATP synthase gamma chain; n=7; Dikarya|... 34 4.0
UniRef50_Q5NQZ0 Cluster: ATP synthase gamma chain; n=7; Alphapro... 34 4.0
UniRef50_Q1MP34 Cluster: ATP synthase gamma chain; n=1; Lawsonia... 34 5.3
UniRef50_Q74GY1 Cluster: ATP synthase gamma chain; n=11; Deltapr... 33 6.9
UniRef50_Q2S431 Cluster: ATP synthase gamma chain; n=1; Saliniba... 33 9.2
UniRef50_A4XKX1 Cluster: ATP synthase gamma chain; n=1; Caldicel... 33 9.2
>UniRef50_Q5RH26 Cluster: ATP synthase gamma chain; n=8;
Bilateria|Rep: ATP synthase gamma chain - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 292
Score = 40.7 bits (91), Expect = 0.046
Identities = 26/51 (50%), Positives = 32/51 (62%)
Frame = -3
Query: 692 SEQXSRMTAMDNASKNAXXXXXXXXXXXSTGPVKLSSXRELIEIISGAAAL 540
SEQ +RMTAMD+ASKNA + + + +ELIEIISGAAAL
Sbjct: 243 SEQSARMTAMDSASKNASEMIDKLTLTFNRTRQAVIT-KELIEIISGAAAL 292
>UniRef50_Q96250 Cluster: ATP synthase gamma chain, mitochondrial
precursor; n=14; Magnoliophyta|Rep: ATP synthase gamma
chain, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 325
Score = 39.9 bits (89), Expect = 0.080
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = -3
Query: 698 ACSEQXSRMTAMDNASKNAXXXXXXXXXXXSTGPVKLSSXRELIEIISGAAALD 537
ACSE +RM+AMD++S+NA + S ELIEIISGA+AL+
Sbjct: 270 ACSEMGARMSAMDSSSRNA-GEMLDRLTLTYNRTRQASITTELIEIISGASALE 322
>UniRef50_A2Z5X7 Cluster: ATP synthase gamma chain; n=3; Oryza
sativa|Rep: ATP synthase gamma chain - Oryza sativa
subsp. indica (Rice)
Length = 368
Score = 39.1 bits (87), Expect = 0.14
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = -3
Query: 698 ACSEQXSRMTAMDNASKNAXXXXXXXXXXXSTGPVKLSSXRELIEIISGAAALD 537
ACSE +RM+AMD++S+NA + S ELIEIISGA+AL+
Sbjct: 315 ACSELGARMSAMDSSSRNA-GEMLDRLTLTYNRTRQASITTELIEIISGASALE 367
>UniRef50_Q54DF1 Cluster: ATP synthase gamma chain; n=1;
Dictyostelium discoideum AX4|Rep: ATP synthase gamma
chain - Dictyostelium discoideum AX4
Length = 306
Score = 35.5 bits (78), Expect = 1.7
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = -3
Query: 692 SEQXSRMTAMDNASKNAXXXXXXXXXXXSTGPVKLSSXRELIEIISGAAALD 537
SE +RM AMDNASKN + + + ELIEI+SGA+A++
Sbjct: 253 SEMAARMVAMDNASKNGESISQALGLQYNRARQAMIT-SELIEIVSGASAIE 303
>UniRef50_Q4N9B3 Cluster: ATP synthase F1, gamma chain, putative;
n=5; Aconoidasida|Rep: ATP synthase F1, gamma chain,
putative - Theileria parva
Length = 314
Score = 35.5 bits (78), Expect = 1.7
Identities = 24/51 (47%), Positives = 28/51 (54%)
Frame = -3
Query: 692 SEQXSRMTAMDNASKNAXXXXXXXXXXXSTGPVKLSSXRELIEIISGAAAL 540
SEQ +RM+AMDNAS NA + + ELIEIISGA AL
Sbjct: 265 SEQSARMSAMDNASSNATDMLSKLTLKYNRAR-QSKITLELIEIISGANAL 314
>UniRef50_Q7RKU7 Cluster: ATP synthase gamma chain; n=5; Plasmodium
(Vinckeia)|Rep: ATP synthase gamma chain - Plasmodium
yoelii yoelii
Length = 316
Score = 35.1 bits (77), Expect = 2.3
Identities = 24/51 (47%), Positives = 28/51 (54%)
Frame = -3
Query: 692 SEQXSRMTAMDNASKNAXXXXXXXXXXXSTGPVKLSSXRELIEIISGAAAL 540
SEQ +RMTAMDNAS +A + + ELIEIISGA AL
Sbjct: 267 SEQSARMTAMDNASSSATDMLGALSLRYNRAR-QSKITLELIEIISGANAL 316
>UniRef50_Q4LDE7 Cluster: ATP synthase gamma chain, mitochondrial
precursor; n=1; Polytomella sp. Pringsheim 198.80|Rep:
ATP synthase gamma chain, mitochondrial precursor -
Polytomella sp. Pringsheim 198.80
Length = 317
Score = 34.7 bits (76), Expect = 3.0
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = -3
Query: 695 CSEQXSRMTAMDNASKNAXXXXXXXXXXXSTGPVKLSSXRELIEIISGAAAL 540
CSE SRM+AM+N++K+A + + ELIEII+GA+AL
Sbjct: 264 CSEHASRMSAMENSTKSA-GEMLGKLTLDYNRKRQATITTELIEIIAGASAL 314
>UniRef50_O21267 Cluster: ATP synthase gamma chain; n=1;
Reclinomonas americana|Rep: ATP synthase gamma chain -
Reclinomonas americana
Length = 281
Score = 34.7 bits (76), Expect = 3.0
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = -3
Query: 692 SEQXSRMTAMDNASKNAXXXXXXXXXXXSTGPVKLSSXRELIEIISGAAAL 540
SEQ +RM AMDNA+KNA + + S ELIEIIS A+A+
Sbjct: 227 SEQGARMNAMDNAAKNAGEMIDKLTLIYNKAR-QASITSELIEIISCASAV 276
>UniRef50_Q1IIG7 Cluster: ATP synthase gamma chain; n=1;
Acidobacteria bacterium Ellin345|Rep: ATP synthase gamma
chain - Acidobacteria bacterium (strain Ellin345)
Length = 345
Score = 34.3 bits (75), Expect = 4.0
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = -3
Query: 692 SEQXSRMTAMDNASKNAXXXXXXXXXXXSTGPVKLSSXRELIEIISGAAAL 540
+E +RMTAMD+A+ NA + + + +E+IEI+SGAAAL
Sbjct: 296 AEHAARMTAMDSATNNAGEMIDSYTLQMNRAR-QAAITKEIIEIVSGAAAL 345
>UniRef50_Q4P473 Cluster: ATP synthase gamma chain; n=7;
Dikarya|Rep: ATP synthase gamma chain - Ustilago maydis
(Smut fungus)
Length = 312
Score = 34.3 bits (75), Expect = 4.0
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = -3
Query: 701 GACSEQXSRMTAMDNASKNAXXXXXXXXXXXSTGPVKLSSXRELIEIISGAAAL 540
G SE S+ AMDNASKNA + G + + +L++II+GA+AL
Sbjct: 260 GHASEINSKRNAMDNASKNAGDMISSLNMIYNRGR-QAAITNDLVDIITGASAL 312
>UniRef50_Q5NQZ0 Cluster: ATP synthase gamma chain; n=7;
Alphaproteobacteria|Rep: ATP synthase gamma chain -
Zymomonas mobilis
Length = 298
Score = 34.3 bits (75), Expect = 4.0
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = -3
Query: 698 ACSEQXSRMTAMDNASKNAXXXXXXXXXXXSTGPVKLSSXRELIEIISGAAAL 540
A SEQ SRM+AM+N+++NA + + EL+EIISGA AL
Sbjct: 247 ATSEQGSRMSAMENSTRNA-GEMISKLSIQYNRLRQAAITTELVEIISGAEAL 298
>UniRef50_Q1MP34 Cluster: ATP synthase gamma chain; n=1; Lawsonia
intracellularis PHE/MN1-00|Rep: ATP synthase gamma chain
- Lawsonia intracellularis (strain PHE/MN1-00)
Length = 289
Score = 33.9 bits (74), Expect = 5.3
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 692 SEQXSRMTAMDNASKNA-XXXXXXXXXXXSTGPVKLSSXRELIEIISGAAAL 540
SE +RMTAMDNA++N T ++S ELI+I+SGA AL
Sbjct: 239 SENAARMTAMDNATRNCDELIGNLTRLYNKTRQASITS--ELIDIVSGAEAL 288
>UniRef50_Q74GY1 Cluster: ATP synthase gamma chain; n=11;
Deltaproteobacteria|Rep: ATP synthase gamma chain -
Geobacter sulfurreducens
Length = 287
Score = 33.5 bits (73), Expect = 6.9
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = -3
Query: 692 SEQXSRMTAMDNASKNAXXXXXXXXXXXSTGPVKLSSXRELIEIISGAAAL 540
SE +RMTAMD+ASKNA + + + EL+EIISGA ++
Sbjct: 236 SEHGARMTAMDSASKNATEMIGKLTLQYNRAR-QAAITTELMEIISGAESI 285
>UniRef50_Q2S431 Cluster: ATP synthase gamma chain; n=1;
Salinibacter ruber DSM 13855|Rep: ATP synthase gamma
chain - Salinibacter ruber (strain DSM 13855)
Length = 308
Score = 33.1 bits (72), Expect = 9.2
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = -3
Query: 692 SEQXSRMTAMDNASKNAXXXXXXXXXXXSTGPVKLSSXRELIEIISGAAALD 537
+EQ +RM AMDNA+ NA + + + REL++I SGA AL+
Sbjct: 255 AEQGARMVAMDNATSNAEELIEDLTLEYNRAR-QSAITRELLDITSGAEALE 305
>UniRef50_A4XKX1 Cluster: ATP synthase gamma chain; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep: ATP
synthase gamma chain - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 292
Score = 33.1 bits (72), Expect = 9.2
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = -3
Query: 692 SEQXSRMTAMDNASKNAXXXXXXXXXXXSTGPVKLSSXRELIEIISGAAAL 540
SE +RMTAMDNA+K+A + + + +E+ EIISGAAAL
Sbjct: 242 SELAARMTAMDNATKSADEMIQKLVLKLNRERQAVIT-QEISEIISGAAAL 291
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,061,382
Number of Sequences: 1657284
Number of extensions: 10038148
Number of successful extensions: 19784
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19743
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75423184424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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