Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_P03
         (793 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    28   0.074
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    27   0.23 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   0.52 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   4.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   4.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.9  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 28.3 bits (60), Expect = 0.074
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 633 VYFNGVGHWFFYRGMGRASRRGKXWFGNMHGGXVCPHGP 749
           V ++ VGHW+   G G        W  +MHGG   P+ P
Sbjct: 455 VIYSTVGHWYLDCGFG-------PWKPSMHGGVCDPYTP 486


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 565  PLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 458
            PLT  R  + T    PCR+   SP++     T RST
Sbjct: 915  PLTSPRQPAETHAGSPCRNSA-SPASSDRSGTPRST 949


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +3

Query: 603 LDMDGHWAVNVYFNGVGHWFFYRGMGRASRRGKXWFGN 716
           L+++  +  N Y +    W   R +    R+ K WF N
Sbjct: 256 LELEKEFLFNAYVSKQKRWELARNLNLTERQVKIWFQN 293


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 136 TFELMYLLWLSYEKLSPIFI 77
           TF ++ +   SYEKLSP+ +
Sbjct: 328 TFLIVMVQKASYEKLSPVVL 347


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 405 WYRYLNWVRYG 437
           W  +L+W RYG
Sbjct: 587 WLSFLSWFRYG 597


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 405 WYRYLNWVRYG 437
           W  +L+W RYG
Sbjct: 587 WLSFLSWFRYG 597


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,381
Number of Sequences: 336
Number of extensions: 2582
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)