Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_P03
(793 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U17838-1|AAC50820.2| 1719|Homo sapiens zinc finger protein RIZ p... 37 0.072
D45132-1|BAA08110.1| 1482|Homo sapiens zinc-finger DNA-binding p... 37 0.072
AL583942-2|CAH70943.1| 1718|Homo sapiens PR domain containing 2,... 37 0.072
AL031277-4|CAI19344.1| 1540|Homo sapiens PR domain containing 2,... 37 0.072
AL031277-3|CAB37643.1| 1481|Homo sapiens PR domain containing 2,... 37 0.072
AL031277-2|CAI19343.1| 1718|Homo sapiens PR domain containing 2,... 37 0.072
AB208877-1|BAD92114.1| 1576|Homo sapiens PR-domain zinc finger p... 37 0.072
AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein. 35 0.29
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein. 35 0.29
X74370-1|CAA52408.1| 543|Homo sapiens mucin protein. 34 0.68
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 33 1.2
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 33 1.2
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 33 1.2
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 33 1.2
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 33 1.2
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 33 1.2
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 32 2.7
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 32 2.7
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 31 3.6
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 31 3.6
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 31 3.6
BC107786-1|AAI07787.1| 575|Homo sapiens BCL2-associated athanog... 31 3.6
BC014656-1|AAH14656.1| 575|Homo sapiens BCL2-associated athanog... 31 3.6
BC006418-1|AAH06418.1| 575|Homo sapiens BCL2-associated athanog... 31 3.6
AL137582-1|CAB70824.1| 616|Homo sapiens hypothetical protein pr... 31 3.6
AK222800-1|BAD96520.1| 575|Homo sapiens BCL2-associated athanog... 31 3.6
AF127139-1|AAF26839.1| 575|Homo sapiens Bcl-2-binding protein B... 31 3.6
AF095193-1|AAD16122.2| 575|Homo sapiens BAG-family molecular ch... 31 3.6
AF071218-1|AAF69592.2| 575|Homo sapiens docking protein CAIR-1 ... 31 3.6
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 31 4.8
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 31 4.8
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 31 4.8
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 31 4.8
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 31 4.8
AK223352-1|BAD97072.1| 507|Homo sapiens nucleoporin 54kDa varia... 31 4.8
AK222752-1|BAD96472.1| 508|Homo sapiens nucleoporin 54kDa varia... 31 4.8
AK001517-1|BAA91735.1| 484|Homo sapiens protein ( Homo sapiens ... 31 4.8
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 4.8
AF157322-1|AAF67488.1| 505|Homo sapiens nucleoporin p54 protein... 31 4.8
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 4.8
AB018318-1|BAA34495.2| 639|Homo sapiens KIAA0775 protein protein. 31 6.3
Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein. 30 8.3
Y09445-1|CAA70592.1| 513|Homo sapiens TBX5 protein. 30 8.3
X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein. 30 8.3
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 30 8.3
CR541721-1|CAG46522.1| 522|Homo sapiens NUP62 protein. 30 8.3
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 30 8.3
BC101107-1|AAI01108.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.3
BC101106-1|AAI01107.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.3
BC101105-1|AAI01106.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.3
BC101104-1|AAI01105.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.3
BC095410-1|AAH95410.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.3
BC050717-1|AAH50717.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.3
BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2... 30 8.3
BC014842-1|AAH14842.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.3
BC003663-1|AAH03663.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.3
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 30 8.3
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 30 8.3
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 30 8.3
AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2... 30 8.3
AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2... 30 8.3
AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2... 30 8.3
AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2... 30 8.3
AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein. 30 8.3
AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein. 30 8.3
AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein pro... 30 8.3
AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein. 30 8.3
AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein pro... 30 8.3
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 30 8.3
>U17838-1|AAC50820.2| 1719|Homo sapiens zinc finger protein RIZ
protein.
Length = 1719
Score = 37.1 bits (82), Expect = 0.072
Identities = 33/115 (28%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Frame = -1
Query: 787 LTPVYXXVPXTSKGPCGQ-----TXPPCIFPNQXLPRREARPIPR*KNQCPTPLKYTLTA 623
L P+ +S PC T PP + P LP + P + CP+PL TA
Sbjct: 962 LPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASP---HPCPSPLS-NATA 1017
Query: 622 QCPSMSRSQFRTPSXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 458
Q P S +PS PP+ P S + S +S S+ S+S S+
Sbjct: 1018 QSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSS 1072
>D45132-1|BAA08110.1| 1482|Homo sapiens zinc-finger DNA-binding
protein protein.
Length = 1482
Score = 37.1 bits (82), Expect = 0.072
Identities = 33/115 (28%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Frame = -1
Query: 787 LTPVYXXVPXTSKGPCGQ-----TXPPCIFPNQXLPRREARPIPR*KNQCPTPLKYTLTA 623
L P+ +S PC T PP + P LP + P + CP+PL TA
Sbjct: 761 LPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASP---HPCPSPLS-NATA 816
Query: 622 QCPSMSRSQFRTPSXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 458
Q P S +PS PP+ P S + S +S S+ S+S S+
Sbjct: 817 QSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSS 871
>AL583942-2|CAH70943.1| 1718|Homo sapiens PR domain containing 2, with
ZNF domain protein.
Length = 1718
Score = 37.1 bits (82), Expect = 0.072
Identities = 33/115 (28%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Frame = -1
Query: 787 LTPVYXXVPXTSKGPCGQ-----TXPPCIFPNQXLPRREARPIPR*KNQCPTPLKYTLTA 623
L P+ +S PC T PP + P LP + P + CP+PL TA
Sbjct: 961 LPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASP---HPCPSPLS-NATA 1016
Query: 622 QCPSMSRSQFRTPSXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 458
Q P S +PS PP+ P S + S +S S+ S+S S+
Sbjct: 1017 QSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSS 1071
>AL031277-4|CAI19344.1| 1540|Homo sapiens PR domain containing 2, with
ZNF domain protein.
Length = 1540
Score = 37.1 bits (82), Expect = 0.072
Identities = 33/115 (28%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Frame = -1
Query: 787 LTPVYXXVPXTSKGPCGQ-----TXPPCIFPNQXLPRREARPIPR*KNQCPTPLKYTLTA 623
L P+ +S PC T PP + P LP + P + CP+PL TA
Sbjct: 819 LPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASP---HPCPSPLS-NATA 874
Query: 622 QCPSMSRSQFRTPSXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 458
Q P S +PS PP+ P S + S +S S+ S+S S+
Sbjct: 875 QSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSS 929
>AL031277-3|CAB37643.1| 1481|Homo sapiens PR domain containing 2, with
ZNF domain protein.
Length = 1481
Score = 37.1 bits (82), Expect = 0.072
Identities = 33/115 (28%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Frame = -1
Query: 787 LTPVYXXVPXTSKGPCGQ-----TXPPCIFPNQXLPRREARPIPR*KNQCPTPLKYTLTA 623
L P+ +S PC T PP + P LP + P + CP+PL TA
Sbjct: 760 LPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASP---HPCPSPLS-NATA 815
Query: 622 QCPSMSRSQFRTPSXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 458
Q P S +PS PP+ P S + S +S S+ S+S S+
Sbjct: 816 QSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSS 870
>AL031277-2|CAI19343.1| 1718|Homo sapiens PR domain containing 2, with
ZNF domain protein.
Length = 1718
Score = 37.1 bits (82), Expect = 0.072
Identities = 33/115 (28%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Frame = -1
Query: 787 LTPVYXXVPXTSKGPCGQ-----TXPPCIFPNQXLPRREARPIPR*KNQCPTPLKYTLTA 623
L P+ +S PC T PP + P LP + P + CP+PL TA
Sbjct: 961 LPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASP---HPCPSPLS-NATA 1016
Query: 622 QCPSMSRSQFRTPSXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 458
Q P S +PS PP+ P S + S +S S+ S+S S+
Sbjct: 1017 QSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSS 1071
>AB208877-1|BAD92114.1| 1576|Homo sapiens PR-domain zinc finger
protein 2 variant protein.
Length = 1576
Score = 37.1 bits (82), Expect = 0.072
Identities = 33/115 (28%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Frame = -1
Query: 787 LTPVYXXVPXTSKGPCGQ-----TXPPCIFPNQXLPRREARPIPR*KNQCPTPLKYTLTA 623
L P+ +S PC T PP + P LP + P + CP+PL TA
Sbjct: 819 LPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASP---HPCPSPLS-NATA 874
Query: 622 QCPSMSRSQFRTPSXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 458
Q P S +PS PP+ P S + S +S S+ S+S S+
Sbjct: 875 QSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSS 929
>AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.
Length = 4957
Score = 35.1 bits (77), Expect = 0.29
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = -1
Query: 727 PPCIFPNQXLPRREARPIPR*KNQCP-TPLKYTLTAQCPSMSRSQFRTPSXYQCPPLTPS 551
PP P+ R P + +Q P TP + A CPS +F++P Y PP P
Sbjct: 1819 PPRSLPSDPFSRVPVSPQSQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPSRPQ 1878
Query: 550 RSTSRTQ*KRPCRSQ 506
+P R Q
Sbjct: 1879 SRDPFAPLHKPPRPQ 1893
>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
Length = 5262
Score = 35.1 bits (77), Expect = 0.29
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = -1
Query: 727 PPCIFPNQXLPRREARPIPR*KNQCP-TPLKYTLTAQCPSMSRSQFRTPSXYQCPPLTPS 551
PP P+ R P + +Q P TP + A CPS +F++P Y PP P
Sbjct: 2124 PPRSLPSDPFSRVPVSPQSQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPSRPQ 2183
Query: 550 RSTSRTQ*KRPCRSQ 506
+P R Q
Sbjct: 2184 SRDPFAPLHKPPRPQ 2198
>X74370-1|CAA52408.1| 543|Homo sapiens mucin protein.
Length = 543
Score = 33.9 bits (74), Expect = 0.68
Identities = 26/74 (35%), Positives = 33/74 (44%)
Frame = -1
Query: 679 PIPR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSXYQCPPLTPSRSTSRTQ*KRPCRSQLT 500
P P CP PL+ P S T S Y C PL S +T T P LT
Sbjct: 12 PRPPALRPCPPPLRGR-----PGSSTELAPTISHYDCSPLD-STATPSTPGTAPPPKVLT 65
Query: 499 SPSTGHTQSTSRST 458
SP+T T ++S++T
Sbjct: 66 SPATTPTATSSKAT 79
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 33.1 bits (72), Expect = 1.2
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = -1
Query: 679 PIPR*KNQCPTPLKYTLT-AQCPSMSRSQFRTPSXYQCPPLTPSRSTSRTQ*KRPCRSQL 503
P R +++ TP + + ++ P+ RS+ RTP+ + TP+R R++ + P R +
Sbjct: 567 PATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRS 625
Query: 502 TSPSTGHTQSTSRSTCLCTLRSPYRTQLR 416
+ S +S SRS + RS RT R
Sbjct: 626 RTRSPVRRRSRSRSPARRSGRSRSRTPAR 654
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 33.1 bits (72), Expect = 1.2
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = -1
Query: 679 PIPR*KNQCPTPLKYTLT-AQCPSMSRSQFRTPSXYQCPPLTPSRSTSRTQ*KRPCRSQL 503
P R +++ TP + + ++ P+ RS+ RTP+ + TP+R R++ + P R +
Sbjct: 567 PATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRS 625
Query: 502 TSPSTGHTQSTSRSTCLCTLRSPYRTQLR 416
+ S +S SRS + RS RT R
Sbjct: 626 RTRSPVRRRSRSRSPARRSGRSRSRTPAR 654
Score = 31.9 bits (69), Expect = 2.7
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Frame = -1
Query: 694 RREARPIPR*KNQCPTP--LKYTLTAQCPSMSR-SQFRTP------SXYQCPPLTPSRST 542
R A P+ R +++ TP + ++ P+ R S+ RTP S + PP+T RS
Sbjct: 1912 RSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSR 1971
Query: 541 SRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 425
SRT +R RS+ TSP T +S SR++ + RS RT
Sbjct: 1972 SRTSPITRRRSRSR-TSPVT-RRRSRSRTSPVTRRRSRSRT 2010
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 33.1 bits (72), Expect = 1.2
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = -1
Query: 679 PIPR*KNQCPTPLKYTLT-AQCPSMSRSQFRTPSXYQCPPLTPSRSTSRTQ*KRPCRSQL 503
P R +++ TP + + ++ P+ RS+ RTP+ + TP+R R++ + P R +
Sbjct: 567 PATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRS 625
Query: 502 TSPSTGHTQSTSRSTCLCTLRSPYRTQLR 416
+ S +S SRS + RS RT R
Sbjct: 626 RTRSPVRRRSRSRSPARRSGRSRSRTPAR 654
Score = 31.9 bits (69), Expect = 2.7
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Frame = -1
Query: 694 RREARPIPR*KNQCPTP--LKYTLTAQCPSMSR-SQFRTP------SXYQCPPLTPSRST 542
R A P+ R +++ TP + ++ P+ R S+ RTP S + PP+T RS
Sbjct: 1912 RSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSR 1971
Query: 541 SRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 425
SRT +R RS+ TSP T +S SR++ + RS RT
Sbjct: 1972 SRTSPITRRRSRSR-TSPVT-RRRSRSRTSPVTRRRSRSRT 2010
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 33.1 bits (72), Expect = 1.2
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = -1
Query: 679 PIPR*KNQCPTPLKYTLT-AQCPSMSRSQFRTPSXYQCPPLTPSRSTSRTQ*KRPCRSQL 503
P R +++ TP + + ++ P+ RS+ RTP+ + TP+R R++ + P R +
Sbjct: 532 PATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRS 590
Query: 502 TSPSTGHTQSTSRSTCLCTLRSPYRTQLR 416
+ S +S SRS + RS RT R
Sbjct: 591 RTRSPVRRRSRSRSPARRSGRSRSRTPAR 619
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 33.1 bits (72), Expect = 1.2
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = -1
Query: 679 PIPR*KNQCPTPLKYTLT-AQCPSMSRSQFRTPSXYQCPPLTPSRSTSRTQ*KRPCRSQL 503
P R +++ TP + + ++ P+ RS+ RTP+ + TP+R R++ + P R +
Sbjct: 357 PATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRS 415
Query: 502 TSPSTGHTQSTSRSTCLCTLRSPYRTQLR 416
+ S +S SRS + RS RT R
Sbjct: 416 RTRSPVRRRSRSRSPARRSGRSRSRTPAR 444
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 33.1 bits (72), Expect = 1.2
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = -1
Query: 679 PIPR*KNQCPTPLKYTLT-AQCPSMSRSQFRTPSXYQCPPLTPSRSTSRTQ*KRPCRSQL 503
P R +++ TP + + ++ P+ RS+ RTP+ + TP+R R++ + P R +
Sbjct: 615 PATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRS 673
Query: 502 TSPSTGHTQSTSRSTCLCTLRSPYRTQLR 416
+ S +S SRS + RS RT R
Sbjct: 674 RTRSPVRRRSRSRSPARRSGRSRSRTPAR 702
Score = 31.9 bits (69), Expect = 2.7
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Frame = -1
Query: 694 RREARPIPR*KNQCPTP--LKYTLTAQCPSMSR-SQFRTP------SXYQCPPLTPSRST 542
R A P+ R +++ TP + ++ P+ R S+ RTP S + PP+T RS
Sbjct: 1960 RSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSR 2019
Query: 541 SRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 425
SRT +R RS+ TSP T +S SR++ + RS RT
Sbjct: 2020 SRTSPITRRRSRSR-TSPVT-RRRSRSRTSPVTRRRSRSRT 2058
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 31.9 bits (69), Expect = 2.7
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Frame = -1
Query: 694 RREARPIPR*KNQCPTP--LKYTLTAQCPSMSR-SQFRTP------SXYQCPPLTPSRST 542
R A P+ R +++ TP + ++ P+ R S+ RTP S + PP+T RS
Sbjct: 944 RSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSR 1003
Query: 541 SRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 425
SRT +R RS+ TSP T +S SR++ + RS RT
Sbjct: 1004 SRTSPITRRRSRSR-TSPVT-RRRSRSRTSPVTRRRSRSRT 1042
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 31.9 bits (69), Expect = 2.7
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Frame = -1
Query: 694 RREARPIPR*KNQCPTP--LKYTLTAQCPSMSR-SQFRTP------SXYQCPPLTPSRST 542
R A P+ R +++ TP + ++ P+ R S+ RTP S + PP+T RS
Sbjct: 435 RSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSR 494
Query: 541 SRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 425
SRT +R RS+ TSP T +S SR++ + RS RT
Sbjct: 495 SRTSPITRRRSRSR-TSPVT-RRRSRSRTSPVTRRRSRSRT 533
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 31.5 bits (68), Expect = 3.6
Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Frame = -1
Query: 733 TXPPCIFPNQXLPRREARPIPR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSXYQCP--PL 560
T PP P+ + PI PT + PS + TPS P P+
Sbjct: 1025 TPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPI 1084
Query: 559 TPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 458
T + + S T P + +T+PS T S +T
Sbjct: 1085 TTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTT 1118
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 31.5 bits (68), Expect = 3.6
Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Frame = -1
Query: 733 TXPPCIFPNQXLPRREARPIPR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSXYQCP--PL 560
T PP P+ + PI PT + PS + TPS P P+
Sbjct: 308 TPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPI 367
Query: 559 TPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 458
T + + S T P + +T+PS T S +T
Sbjct: 368 TTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTT 401
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 31.5 bits (68), Expect = 3.6
Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Frame = -1
Query: 733 TXPPCIFPNQXLPRREARPIPR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSXYQCP--PL 560
T PP P+ + PI PT + PS + TPS P P+
Sbjct: 1650 TPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPI 1709
Query: 559 TPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 458
T + + S T P + +T+PS T S +T
Sbjct: 1710 TTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTT 1743
>BC107786-1|AAI07787.1| 575|Homo sapiens BCL2-associated athanogene
3 protein.
Length = 575
Score = 31.5 bits (68), Expect = 3.6
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = -1
Query: 763 PXTSKGPCGQTXPPCIFPNQXLPRR-EARPIPR*KNQCPTPLKYTLTAQCPSMSRSQFRT 587
P + GP G PP P Q + + +++P+ +Q P P + + P
Sbjct: 321 PESKPGPVGPELPPGHIPIQVIRKEVDSKPV----SQKPPPPSEKVEVKVP--------- 367
Query: 586 PSXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQST 470
P+ CPP +P S + K + +PST ++T
Sbjct: 368 PAPVPCPPPSPGPSAVPSSPKSVATEERAAPSTAPAEAT 406
>BC014656-1|AAH14656.1| 575|Homo sapiens BCL2-associated athanogene
3 protein.
Length = 575
Score = 31.5 bits (68), Expect = 3.6
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = -1
Query: 763 PXTSKGPCGQTXPPCIFPNQXLPRR-EARPIPR*KNQCPTPLKYTLTAQCPSMSRSQFRT 587
P + GP G PP P Q + + +++P+ +Q P P + + P
Sbjct: 321 PESKPGPVGPELPPGHIPIQVIRKEVDSKPV----SQKPPPPSEKVEVKVP--------- 367
Query: 586 PSXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQST 470
P+ CPP +P S + K + +PST ++T
Sbjct: 368 PAPVPCPPPSPGPSAVPSSPKSVATEERAAPSTAPAEAT 406
>BC006418-1|AAH06418.1| 575|Homo sapiens BCL2-associated athanogene
3 protein.
Length = 575
Score = 31.5 bits (68), Expect = 3.6
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = -1
Query: 763 PXTSKGPCGQTXPPCIFPNQXLPRR-EARPIPR*KNQCPTPLKYTLTAQCPSMSRSQFRT 587
P + GP G PP P Q + + +++P+ +Q P P + + P
Sbjct: 321 PESKPGPVGPELPPGHIPIQVIRKEVDSKPV----SQKPPPPSEKVEVKVP--------- 367
Query: 586 PSXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQST 470
P+ CPP +P S + K + +PST ++T
Sbjct: 368 PAPVPCPPPSPGPSAVPSSPKSVATEERAAPSTAPAEAT 406
>AL137582-1|CAB70824.1| 616|Homo sapiens hypothetical protein
protein.
Length = 616
Score = 31.5 bits (68), Expect = 3.6
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = -1
Query: 763 PXTSKGPCGQTXPPCIFPNQXLPRR-EARPIPR*KNQCPTPLKYTLTAQCPSMSRSQFRT 587
P + GP G PP P Q + + +++P+ +Q P P + + P
Sbjct: 362 PESKPGPVGPELPPGHIPIQVIRKEVDSKPV----SQKPPPPSEKVEVKVP--------- 408
Query: 586 PSXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQST 470
P+ CPP +P S + K + +PST ++T
Sbjct: 409 PAPVPCPPPSPGPSAVPSSPKSVATEERAAPSTAPAEAT 447
>AK222800-1|BAD96520.1| 575|Homo sapiens BCL2-associated athanogene
3 variant protein.
Length = 575
Score = 31.5 bits (68), Expect = 3.6
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = -1
Query: 763 PXTSKGPCGQTXPPCIFPNQXLPRR-EARPIPR*KNQCPTPLKYTLTAQCPSMSRSQFRT 587
P + GP G PP P Q + + +++P+ +Q P P + + P
Sbjct: 321 PESKPGPVGPELPPGHIPIQVIRKEVDSKPV----SQKPPPPSEKVEVKVP--------- 367
Query: 586 PSXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQST 470
P+ CPP +P S + K + +PST ++T
Sbjct: 368 PAPVPCPPPSPGPSAVPSSPKSVATEERAAPSTAPAEAT 406
>AF127139-1|AAF26839.1| 575|Homo sapiens Bcl-2-binding protein BIS
protein.
Length = 575
Score = 31.5 bits (68), Expect = 3.6
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = -1
Query: 763 PXTSKGPCGQTXPPCIFPNQXLPRR-EARPIPR*KNQCPTPLKYTLTAQCPSMSRSQFRT 587
P + GP G PP P Q + + +++P+ +Q P P + + P
Sbjct: 321 PESKPGPVGPELPPGHIPIQVIRKEVDSKPV----SQKPPPPSEKVEVKVP--------- 367
Query: 586 PSXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQST 470
P+ CPP +P S + K + +PST ++T
Sbjct: 368 PAPVPCPPPSPGPSAVPSSPKSVATEERAAPSTAPAEAT 406
>AF095193-1|AAD16122.2| 575|Homo sapiens BAG-family molecular
chaperone regulator-3 protein.
Length = 575
Score = 31.5 bits (68), Expect = 3.6
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = -1
Query: 763 PXTSKGPCGQTXPPCIFPNQXLPRR-EARPIPR*KNQCPTPLKYTLTAQCPSMSRSQFRT 587
P + GP G PP P Q + + +++P+ +Q P P + + P
Sbjct: 321 PESKPGPVGPELPPGHIPIQVIRKEVDSKPV----SQKPPPPSEKVEVKVP--------- 367
Query: 586 PSXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQST 470
P+ CPP +P S + K + +PST ++T
Sbjct: 368 PAPVPCPPPSPGPSAVPSSPKSVATEERAAPSTAPAEAT 406
>AF071218-1|AAF69592.2| 575|Homo sapiens docking protein CAIR-1
protein.
Length = 575
Score = 31.5 bits (68), Expect = 3.6
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = -1
Query: 763 PXTSKGPCGQTXPPCIFPNQXLPRR-EARPIPR*KNQCPTPLKYTLTAQCPSMSRSQFRT 587
P + GP G PP P Q + + +++P+ +Q P P + + P
Sbjct: 321 PESKPGPVGPELPPGHIPIQVIRKEVDSKPV----SQKPPPPSEKVEVKVP--------- 367
Query: 586 PSXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQST 470
P+ CPP +P S + K + +PST ++T
Sbjct: 368 PAPVPCPPPSPGPSAVPSSPKSVATEERAAPSTAPAEAT 406
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 591 VPRQXTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 472
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 600 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 639
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 591 VPRQXTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 472
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 600 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 639
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 591 VPRQXTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 472
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 609 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 648
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 591 VPRQXTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 472
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 600 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 639
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 591 VPRQXTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 472
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 609 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 648
>AK223352-1|BAD97072.1| 507|Homo sapiens nucleoporin 54kDa variant
protein.
Length = 507
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 463 FSMWTGYGLSTGMLTGNGTAFSTGYG 540
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AK222752-1|BAD96472.1| 508|Homo sapiens nucleoporin 54kDa variant
protein.
Length = 508
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 463 FSMWTGYGLSTGMLTGNGTAFSTGYG 540
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AK001517-1|BAA91735.1| 484|Homo sapiens protein ( Homo sapiens
cDNA FLJ10655 fis, clone NT2RP2005933, weakly similar to
NUCLEOPORIN NUP57. ).
Length = 484
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 463 FSMWTGYGLSTGMLTGNGTAFSTGYG 540
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 591 VPRQXTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 472
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 598 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 637
>AF157322-1|AAF67488.1| 505|Homo sapiens nucleoporin p54 protein
protein.
Length = 505
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 463 FSMWTGYGLSTGMLTGNGTAFSTGYG 540
F TG+G +TG TG GT TG G
Sbjct: 60 FGFGTGFGTTTGTSTGLGTGLGTGLG 85
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 591 VPRQXTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 472
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 598 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 637
>AB018318-1|BAA34495.2| 639|Homo sapiens KIAA0775 protein protein.
Length = 639
Score = 30.7 bits (66), Expect = 6.3
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -1
Query: 727 PPCIFPNQXLPRREARPIPR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSXYQCPPLTPSR 548
P C P+ P R A P P Q P P + + CPS Q R+P+ CP P R
Sbjct: 369 PQC--PSPSPPARAAPPCP--PCQSPVPQRRSPVPPCPSPQ--QRRSPASPSCPSPVPQR 422
>Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein.
Length = 1379
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 533 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 438
PV VP PV +PV P P+ + +P IE+
Sbjct: 907 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 938
>Y09445-1|CAA70592.1| 513|Homo sapiens TBX5 protein.
Length = 513
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 439 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGY 537
+S CT T WTGY ST LT +S G+
Sbjct: 404 YSSCTVTTVQPWTGYPTSTSPLTSPRGPWSLGW 436
>X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 439 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 540
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 553 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 416
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>CR541721-1|CAG46522.1| 522|Homo sapiens NUP62 protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 439 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 540
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 553 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 416
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>BC101107-1|AAI01108.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 439 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 540
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101106-1|AAI01107.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 439 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 540
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101105-1|AAI01106.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 439 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 540
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101104-1|AAI01105.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 439 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 540
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC095410-1|AAH95410.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 439 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 540
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC050717-1|AAH50717.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 439 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 540
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1377
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 533 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 438
PV VP PV +PV P P+ + +P IE+
Sbjct: 905 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>BC014842-1|AAH14842.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 439 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 540
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC003663-1|AAH03663.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 439 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 540
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 553 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 416
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 553 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 416
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 553 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 416
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 533 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 438
PV VP PV +PV P P+ + +P IE+
Sbjct: 283 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 314
>AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 533 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 438
PV VP PV +PV P P+ + +P IE+
Sbjct: 903 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 934
>AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 533 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 438
PV VP PV +PV P P+ + +P IE+
Sbjct: 283 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 314
>AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 533 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 438
PV VP PV +PV P P+ + +P IE+
Sbjct: 903 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 934
>AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 533 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 438
PV VP PV +PV P P+ + +P IE+
Sbjct: 905 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 533 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 438
PV VP PV +PV P P+ + +P IE+
Sbjct: 905 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein
protein.
Length = 1113
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 533 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 438
PV VP PV +PV P P+ + +P IE+
Sbjct: 641 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 672
>AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein.
Length = 699
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 533 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 438
PV VP PV +PV P P+ + +P IE+
Sbjct: 633 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 664
>AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein
protein.
Length = 757
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 533 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 438
PV VP PV +PV P P+ + +P IE+
Sbjct: 285 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 316
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 553 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 416
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 369 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 414
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,922,660
Number of Sequences: 237096
Number of extensions: 1553362
Number of successful extensions: 8430
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 7599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8337
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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