Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_P03
(793 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 33 0.23
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.41
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 32 0.54
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 32 0.54
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 31 0.71
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 31 1.2
U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF039038-6|AAK21431.2| 629|Caenorhabditis elegans Hypothetical ... 29 3.8
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 29 3.8
Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical p... 29 5.0
Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical p... 29 5.0
Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein. 28 6.7
AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein. 28 6.7
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 28 8.8
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 8.8
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 28 8.8
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 33.1 bits (72), Expect = 0.23
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Frame = -1
Query: 763 PXTSKGPCGQTXPPCIFPNQXLPRREARPIPR*KNQCPTPLKYTLTAQCPS--MSRSQFR 590
P + P Q PP P+ P ++A+P+ + + P P + Q P+ ++ +
Sbjct: 402 PAPQQAPPVQQNPPKPTPSPAPPAQKAQPVTQQQASAP-PTSPSAPVQAPNTPTQKASSQ 460
Query: 589 TPSXYQ-CPPLTPSRSTSRTQ*KRPCRSQLTSPST-GHTQ 476
P Q PP PS S+ T K+P +S +T HTQ
Sbjct: 461 DPIVQQDPPPKEPSISSEPTTTKKPRKSFSPGSATPKHTQ 500
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 32.3 bits (70), Expect = 0.41
Identities = 33/132 (25%), Positives = 45/132 (34%), Gaps = 4/132 (3%)
Frame = -1
Query: 793 LXLTPVYXXVPXTSK---GPCGQTXPPCIFPNQXLPRREARPIPR*KNQCPTP-LKYTLT 626
L ++ ++ +P S G C PPC P P P+P CP P +
Sbjct: 3 LPISILFSIIPIASSTFGGCCSMGPPPC--PPPPPPMCAPPPLP-----CPPPPICPPQF 55
Query: 625 AQCPSMSRSQFRTPSXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCT 446
P M P CPP P + PC+S +P + C C
Sbjct: 56 CPPPPMCPPPPPPPPPPMCPPPPPPMPSYS-----PCQSYAPAPVFNQYAMQPANDCCCR 110
Query: 445 LRSPYRTQLRYR 410
SP R R+R
Sbjct: 111 CGSPCRFMARHR 122
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 31.9 bits (69), Expect = 0.54
Identities = 28/75 (37%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = -1
Query: 673 PR*KNQCP-TPL-KYTLTAQCPSMSRSQFRTPSXYQC---PPLTPSRSTSRTQ*KRPCRS 509
PR Q P +PL K LT + S S F+ P Y+ PPL P STS P S
Sbjct: 1334 PRRMTQQPMSPLAKSPLTPSRDNSSPSAFQFPVVYEASTAPPLPPRPSTSSDVSSSPSTS 1393
Query: 508 QLTSPSTGHTQSTSR 464
TS +T Q R
Sbjct: 1394 GSTSSATKENQEQLR 1408
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 31.9 bits (69), Expect = 0.54
Identities = 28/75 (37%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = -1
Query: 673 PR*KNQCP-TPL-KYTLTAQCPSMSRSQFRTPSXYQC---PPLTPSRSTSRTQ*KRPCRS 509
PR Q P +PL K LT + S S F+ P Y+ PPL P STS P S
Sbjct: 1334 PRRMTQQPMSPLAKSPLTPSRDNSSPSAFQFPVVYEASTAPPLPPRPSTSSDVSSSPSTS 1393
Query: 508 QLTSPSTGHTQSTSR 464
TS +T Q R
Sbjct: 1394 GSTSSATKENQEQLR 1408
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 31.5 bits (68), Expect = 0.71
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 545 HIPYPVEKAVPFPVNIPVDRPYPVHI 468
H+P PV VP P+ +PV P P +
Sbjct: 155 HVPVPVPVQVPVPIRVPVPVPVPTPV 180
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -1
Query: 664 KNQCPTPLKYTLTAQCPSMSRSQFRTPSXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTG 485
+++ P P + ++ P + R+PS + PP P R+ SR+ K P + SPS
Sbjct: 325 QSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRS--KSPPARRRRSPSAS 382
Query: 484 HTQSTSR 464
+ R
Sbjct: 383 KSPPAPR 389
>U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical
protein F35A5.5 protein.
Length = 125
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 542 IPYPVEKAVPFPVNIPVDRPYPVHIEKHVPV 450
+P PV + VP P+ +P+ P P+ + VPV
Sbjct: 15 VPAPVPQPVPVPMPMPMPMPMPMPVPVPVPV 45
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 539 PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHI 444
P PV VP PV +P+ P P+ + VPV +
Sbjct: 12 PVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPV 43
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 542 IPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHI 444
IP PV P P +PV P P+ + +PV +
Sbjct: 9 IPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPV 41
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = -1
Query: 613 SMSRSQFRTPSXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSP 434
S SRS+ R+ + + SRS SR++ P RS+ S S ++S SRS RSP
Sbjct: 212 SRSRSRSRSRDRRRSRSRSSSRSKSRSR-SPPKRSRRESKSKSRSRSRSRSADNRKSRSP 270
Query: 433 YRT 425
R+
Sbjct: 271 SRS 273
>AF039038-6|AAK21431.2| 629|Caenorhabditis elegans Hypothetical
protein K06A5.1 protein.
Length = 629
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = -1
Query: 676 IPR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSXYQCPPLTPSRSTSRTQ*KRPCRS--QL 503
+ R K + PT + T+ C R+ + PPL SRS + +P S QL
Sbjct: 133 VGRSKKRPPTQMAENETSSCMKPREKSTRSQAEVYLPPLKRSRSKCQVSAPQPSNSSLQL 192
Query: 502 TSPSTGHTQSTSRSTCLCT 446
+ + SR+ C T
Sbjct: 193 SQCISESVPRRSRTRCRTT 211
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -1
Query: 652 PTPLKYT-LTAQCPSMSRSQFRTPSXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQ 476
PT +K T T P+ +S TP+ + P TP+ T+ + ++P+T T
Sbjct: 380 PTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPSTM 439
Query: 475 STSRST 458
+S +T
Sbjct: 440 KSSPTT 445
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -1
Query: 652 PTPLKYTLTAQCPSMSRSQFRTPSXYQCPPLTPSR-STSRTQ*KRPC--RSQLTSPSTGH 482
PTP T P+ +S TP+ + P TP+ +T ++ P + ++P+T
Sbjct: 153 PTPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 212
Query: 481 TQSTSRST 458
T +T +ST
Sbjct: 213 TPTTMKST 220
>Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 28.7 bits (61), Expect = 5.0
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = -1
Query: 628 TAQCPSMSRSQFRTPSXY-QCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCL 452
TA S SRS+ R+ S Q L +RS S + +R ++ SPS+ ++S SRST
Sbjct: 83 TASSRSRSRSRSRSRSTMNQQIRLARTRSASGGKLRRSRSARRRSPSSSASRSRSRSTSR 142
Query: 451 CTLRSPYRTQLRYR 410
+S +RYR
Sbjct: 143 TRAQS---IPIRYR 153
>Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 28.7 bits (61), Expect = 5.0
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = -1
Query: 628 TAQCPSMSRSQFRTPSXY-QCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCL 452
TA S SRS+ R+ S Q L +RS S + +R ++ SPS+ ++S SRST
Sbjct: 83 TASSRSRSRSRSRSRSTMNQQIRLARTRSASGGKLRRSRSARRRSPSSSASRSRSRSTSR 142
Query: 451 CTLRSPYRTQLRYR 410
+S +RYR
Sbjct: 143 TRAQS---IPIRYR 153
>Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical
protein C12C8.3b protein.
Length = 1143
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/74 (25%), Positives = 29/74 (39%)
Frame = -1
Query: 784 TPVYXXVPXTSKGPCGQTXPPCIFPNQXLPRREARPIPR*KNQCPTPLKYTLTAQCPSMS 605
TPV+ + T+ PP + + +P+ A P + C TP + L S S
Sbjct: 291 TPVFSPLSPTNTS---MHMPPSLMASPDVPKHSATIAPPRNSMCSTP-RLQLATPMSSQS 346
Query: 604 RSQFRTPSXYQCPP 563
+ F PS P
Sbjct: 347 QQTFPIPSPLGSQP 360
>Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical
protein C12C8.3a protein.
Length = 1147
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/74 (25%), Positives = 29/74 (39%)
Frame = -1
Query: 784 TPVYXXVPXTSKGPCGQTXPPCIFPNQXLPRREARPIPR*KNQCPTPLKYTLTAQCPSMS 605
TPV+ + T+ PP + + +P+ A P + C TP + L S S
Sbjct: 291 TPVFSPLSPTNTS---MHMPPSLMASPDVPKHSATIAPPRNSMCSTP-RLQLATPMSSQS 346
Query: 604 RSQFRTPSXYQCPP 563
+ F PS P
Sbjct: 347 QQTFPIPSPLGSQP 360
>AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein.
Length = 1147
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/74 (25%), Positives = 29/74 (39%)
Frame = -1
Query: 784 TPVYXXVPXTSKGPCGQTXPPCIFPNQXLPRREARPIPR*KNQCPTPLKYTLTAQCPSMS 605
TPV+ + T+ PP + + +P+ A P + C TP + L S S
Sbjct: 291 TPVFSPLSPTNTS---MHMPPSLMASPDVPKHSATIAPPRNSMCSTP-RLQLATPMSSQS 346
Query: 604 RSQFRTPSXYQCPP 563
+ F PS P
Sbjct: 347 QQTFPIPSPLGSQP 360
>AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein.
Length = 1143
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/74 (25%), Positives = 29/74 (39%)
Frame = -1
Query: 784 TPVYXXVPXTSKGPCGQTXPPCIFPNQXLPRREARPIPR*KNQCPTPLKYTLTAQCPSMS 605
TPV+ + T+ PP + + +P+ A P + C TP + L S S
Sbjct: 291 TPVFSPLSPTNTS---MHMPPSLMASPDVPKHSATIAPPRNSMCSTP-RLQLATPMSSQS 346
Query: 604 RSQFRTPSXYQCPP 563
+ F PS P
Sbjct: 347 QQTFPIPSPLGSQP 360
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 568 PPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLR 440
PP+ +R+ + + +RP R Q+ SP +G + + C+C R
Sbjct: 187 PPVVVTRAPAIIENERPWRGQVCSPQSG---CSGGAACICGAR 226
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 27.9 bits (59), Expect = 8.8
Identities = 23/98 (23%), Positives = 36/98 (36%), Gaps = 3/98 (3%)
Frame = -1
Query: 754 SKGPCGQTXPPCIFPNQXLPRREARPI---PR*KNQCPTPLKYTLTAQCPSMSRSQFRTP 584
S P + P + P P++ A P+ P+ + PTP+K + P P
Sbjct: 389 SSDPSPKKAAPAVKPRDSSPKK-ATPLQADPKAQEVPPTPVKNPVKKYKPPWEVDD-EDP 446
Query: 583 SXYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQST 470
P P++ T + K P P+T T T
Sbjct: 447 VEEVKQPEAPAKKTPVLKRKEPAAKDTAKPATSKTPET 484
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 539 PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 438
P+P P P+ IP P+P + K +P H K
Sbjct: 194 PFPKPMLFPKPMPIPKPMPFPKPMPKPMPKHKPK 227
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 539 PYPVEKAVPFPVNIPVDRPYPVHIEKHVP 453
P P+ K +PFP +P +P P + K P
Sbjct: 238 PMPIPKPMPFPKPMPKPKPKPKPMPKPKP 266
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,423,570
Number of Sequences: 27780
Number of extensions: 232778
Number of successful extensions: 904
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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