Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_O20
         (803 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.8  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 400 DETENTIASTTYSETSDKLVS*RFGLG 480
           DET+N  +  TY+E  +KL      LG
Sbjct: 340 DETKNHYSKNTYNEQGNKLADLYKSLG 366


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 400 DETENTIASTTYSETSDKLVS*RFGLG 480
           DET+N  +  TY+E  +KL      LG
Sbjct: 232 DETKNHYSKNTYNEQGNKLADLYKSLG 258


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 398 WNLAPVVVKLLYLASC 351
           WNL P+ V +L  A+C
Sbjct: 922 WNLLPIAVFILVCATC 937


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 398 WNLAPVVVKLLYLASC 351
           WNL P+ V +L  A+C
Sbjct: 922 WNLLPIAVFILVCATC 937


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = -1

Query: 200 DQQGKNGPKKPQP--DHILVTEP 138
           D Q +N PK+P+P  D   VT P
Sbjct: 322 DHQRRNEPKRPRPNIDRHEVTRP 344


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -3

Query: 177 EEATTRPHPGDRAQGRARAPR 115
           EEA   P P  RA G A A R
Sbjct: 271 EEAERAPAPAVRAAGDAAAAR 291


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,512
Number of Sequences: 336
Number of extensions: 3642
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)